RNA–Protein interactions for RNA: ENST00000584716.1

CDK5R1-202, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CDK5R1, Length 962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-202ENST00000584716 KNSTRNQ9Y448 316 aa17■□□□□ 0.31
CDK5R1-202ENST00000584716 NSD3Q9BZ95 1437 aa16.99■□□□□ 0.31
CDK5R1-202ENST00000584716 PLEKHG5O94827 1062 aa16.99■□□□□ 0.31
CDK5R1-202ENST00000584716 PHLPP1O60346 1717 aa16.99■□□□□ 0.31
CDK5R1-202ENST00000584716 TTC21BQ7Z4L5 1316 aa16.98■□□□□ 0.31
CDK5R1-202ENST00000584716 NUTM2GQ5VZR2 741 aa16.98■□□□□ 0.31
CDK5R1-202ENST00000584716 PER1O15534 1290 aaPredicted RBP16.97■□□□□ 0.31
CDK5R1-202ENST00000584716 PXDNQ92626 1479 aa16.97■□□□□ 0.31
CDK5R1-202ENST00000584716 EDC4Q6P2E9 1401 aaKnown RBP16.96■□□□□ 0.31
CDK5R1-202ENST00000584716 NME9Q86XW9 330 aa16.96■□□□□ 0.31
CDK5R1-202ENST00000584716 ABTB2Q8N961 1025 aa16.96■□□□□ 0.31
CDK5R1-202ENST00000584716 ZRANB1Q9UGI0 708 aa16.96■□□□□ 0.31
CDK5R1-202ENST00000584716 TRPM3Q9HCF6 1732 aaPredicted RBP16.96■□□□□ 0.3
CDK5R1-202ENST00000584716 SOS2Q07890 1332 aaPredicted RBP16.96■□□□□ 0.3
CDK5R1-202ENST00000584716 NRKQ7Z2Y5 1582 aa16.95■□□□□ 0.3
CDK5R1-202ENST00000584716 CC2D1BQ5T0F9 858 aaKnown RBP16.95■□□□□ 0.3
CDK5R1-202ENST00000584716 AHDC1Q5TGY3 1603 aaPredicted RBP16.95■□□□□ 0.3
CDK5R1-202ENST00000584716 GGNBP2Q9H3C7 697 aa16.94■□□□□ 0.3
CDK5R1-202ENST00000584716 SSH2Q76I76 1423 aa16.94■□□□□ 0.3
CDK5R1-202ENST00000584716 CGNL1Q0VF96 1302 aa16.94■□□□□ 0.3
CDK5R1-202ENST00000584716 KIF20BQ96Q89 1820 aa16.93■□□□□ 0.3
CDK5R1-202ENST00000584716 FYB1O15117 783 aa16.93■□□□□ 0.3
CDK5R1-202ENST00000584716 SPATA31A3Q5VYP0 1347 aa16.93■□□□□ 0.3
CDK5R1-202ENST00000584716 TTC21AQ8NDW8 1320 aa16.93■□□□□ 0.3
CDK5R1-202ENST00000584716 HSPA1LP34931 641 aa16.92■□□□□ 0.3
CDK5R1-202ENST00000584716 NLRP6P59044 892 aa16.92■□□□□ 0.3
CDK5R1-202ENST00000584716 LRRC59Q96AG4 307 aaKnown RBP16.92■□□□□ 0.3
CDK5R1-202ENST00000584716 SBNO1A3KN83 1393 aa16.91■□□□□ 0.3
CDK5R1-202ENST00000584716 BRD4O60885 1362 aaPredicted RBP16.91■□□□□ 0.3
CDK5R1-202ENST00000584716 PIK3C2AO00443 1686 aa16.91■□□□□ 0.3
CDK5R1-202ENST00000584716 TNS3Q68CZ2 1445 aa16.9■□□□□ 0.3
CDK5R1-202ENST00000584716 COL16A1Q07092 1604 aaPredicted RBP16.9■□□□□ 0.3
CDK5R1-202ENST00000584716 AMER1Q5JTC6 1135 aaPredicted RBP16.9■□□□□ 0.3
CDK5R1-202ENST00000584716 ALS2Q96Q42 1657 aa16.9■□□□□ 0.3
CDK5R1-202ENST00000584716 DIEXFQ68CQ4 756 aaKnown RBP16.89■□□□□ 0.29
CDK5R1-202ENST00000584716 COG3Q96JB2 828 aa16.89■□□□□ 0.29
CDK5R1-202ENST00000584716 SOX12O15370 315 aa16.88■□□□□ 0.29
CDK5R1-202ENST00000584716 TNNT2P45379 298 aaPredicted RBP16.88■□□□□ 0.29
CDK5R1-202ENST00000584716 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
CDK5R1-202ENST00000584716 NLRP13Q86W25 1043 aa16.88■□□□□ 0.29
CDK5R1-202ENST00000584716 CABLES1Q8TDN4 633 aa16.88■□□□□ 0.29
CDK5R1-202ENST00000584716 FBLN1P23142 703 aa16.86■□□□□ 0.29
CDK5R1-202ENST00000584716 ARHGEF10O15013 1369 aa16.86■□□□□ 0.29
CDK5R1-202ENST00000584716 ANKRD26Q9UPS8 1709 aa16.85■□□□□ 0.29
CDK5R1-202ENST00000584716 HAP1P54257 671 aaPredicted RBP16.85■□□□□ 0.29
CDK5R1-202ENST00000584716 MARF1Q9Y4F3 1742 aaKnown RBP16.84■□□□□ 0.29
CDK5R1-202ENST00000584716 NSD2O96028 1365 aa16.84■□□□□ 0.29
CDK5R1-202ENST00000584716 USP31Q70CQ4 1352 aa16.84■□□□□ 0.29
CDK5R1-202ENST00000584716 ZBTB7CA1YPR0 619 aa16.83■□□□□ 0.28
CDK5R1-202ENST00000584716 NUTM2BA6NNL0 878 aaPredicted RBP16.83■□□□□ 0.28
CDK5R1-202ENST00000584716 NUTM2EB1AL46 878 aaPredicted RBP16.83■□□□□ 0.28
CDK5R1-202ENST00000584716 ANP32CO43423 234 aa16.83■□□□□ 0.28
CDK5R1-202ENST00000584716 NUTM2AQ8IVF1 878 aaPredicted RBP16.83■□□□□ 0.28
CDK5R1-202ENST00000584716 PNPLA6Q8IY17 1366 aa16.83■□□□□ 0.28
CDK5R1-202ENST00000584716 MED1Q15648 1581 aaPredicted RBP16.82■□□□□ 0.28
CDK5R1-202ENST00000584716 OVOS2A0A0J9YW53 1432 aa16.82■□□□□ 0.28
CDK5R1-202ENST00000584716 OVOS2Q6IE36 1432 aa16.82■□□□□ 0.28
CDK5R1-202ENST00000584716 NPC1L1Q9UHC9 1359 aa16.82■□□□□ 0.28
CDK5R1-202ENST00000584716 GCP02774 474 aa16.81■□□□□ 0.28
CDK5R1-202ENST00000584716 JCADQ9P266 1359 aa16.8■□□□□ 0.28
CDK5R1-202ENST00000584716 ZC3H6P61129 1189 aaKnown RBP16.8■□□□□ 0.28
CDK5R1-202ENST00000584716 SHPRHQ149N8 1683 aa16.8■□□□□ 0.28
CDK5R1-202ENST00000584716 USP54Q70EL1 1684 aa16.8■□□□□ 0.28
CDK5R1-202ENST00000584716 PHRF1Q9P1Y6 1649 aaKnown RBP16.8■□□□□ 0.28
CDK5R1-202ENST00000584716 MAP2P11137 1827 aaKnown RBP16.8■□□□□ 0.28
CDK5R1-202ENST00000584716 CRYBG1Q9Y4K1 1723 aa16.79■□□□□ 0.28
CDK5R1-202ENST00000584716 USP19O94966 1318 aa16.79■□□□□ 0.28
CDK5R1-202ENST00000584716 COL22A1Q8NFW1 1626 aaPredicted RBP16.79■□□□□ 0.28
CDK5R1-202ENST00000584716 RRS1Q15050 365 aaKnown RBP16.79■□□□□ 0.28
CDK5R1-202ENST00000584716 RALBP1Q15311 655 aa16.79■□□□□ 0.28
CDK5R1-202ENST00000584716 KCNH5Q8NCM2 988 aa16.79■□□□□ 0.28
CDK5R1-202ENST00000584716 PRKRIP1Q9H875 184 aaPredicted RBP16.79■□□□□ 0.28
CDK5R1-202ENST00000584716 PPM1GO15355 546 aaPredicted RBP16.78■□□□□ 0.28
CDK5R1-202ENST00000584716 ABCA3Q99758 1704 aa16.78■□□□□ 0.28
CDK5R1-202ENST00000584716 SLIT3O75094 1523 aa16.77■□□□□ 0.28
CDK5R1-202ENST00000584716 ADAMTS2O95450 1211 aa16.77■□□□□ 0.28
CDK5R1-202ENST00000584716 PARD3Q8TEW0 1356 aa16.77■□□□□ 0.27
CDK5R1-202ENST00000584716 PPP2R1AP30153 589 aa16.76■□□□□ 0.27
CDK5R1-202ENST00000584716 LTN1O94822 1766 aa16.75■□□□□ 0.27
CDK5R1-202ENST00000584716 EMILIN1Q9Y6C2 1016 aa16.75■□□□□ 0.27
CDK5R1-202ENST00000584716 AMPHP49418 695 aa16.74■□□□□ 0.27
CDK5R1-202ENST00000584716 CHRNA2Q15822 529 aa16.74■□□□□ 0.27
CDK5R1-202ENST00000584716 POLKQ9UBT6 870 aa16.74■□□□□ 0.27
CDK5R1-202ENST00000584716 NFAT5O94916 1531 aa16.74■□□□□ 0.27
CDK5R1-202ENST00000584716 MAP3K19Q56UN5 1328 aa16.73■□□□□ 0.27
CDK5R1-202ENST00000584716 MTHFSP49914 203 aa16.73■□□□□ 0.27
CDK5R1-202ENST00000584716 MIER1Q8N108 512 aa16.73■□□□□ 0.27
CDK5R1-202ENST00000584716 KIAA0232Q92628 1395 aa16.73■□□□□ 0.27
CDK5R1-202ENST00000584716 SPATA31A6Q5VVP1 1343 aa16.72■□□□□ 0.27
CDK5R1-202ENST00000584716 MYBBP1AQ9BQG0 1328 aaKnown RBP16.72■□□□□ 0.27
CDK5R1-202ENST00000584716 ARHGEF25Q86VW2 580 aa16.72■□□□□ 0.27
CDK5R1-202ENST00000584716 PRDM11Q9NQV5 511 aa16.72■□□□□ 0.27
CDK5R1-202ENST00000584716 AATKQ6ZMQ8 1374 aa16.72■□□□□ 0.27
CDK5R1-202ENST00000584716 RGPD5Q99666 1765 aa16.7■□□□□ 0.26
CDK5R1-202ENST00000584716 FAM83GA6ND36 823 aa16.7■□□□□ 0.26
CDK5R1-202ENST00000584716 MEX3CQ5U5Q3 659 aaKnown RBP16.7■□□□□ 0.26
CDK5R1-202ENST00000584716 LTV1Q96GA3 475 aaPredicted RBP16.69■□□□□ 0.26
CDK5R1-202ENST00000584716 PEAK1Q9H792 1746 aa16.69■□□□□ 0.26
CDK5R1-202ENST00000584716 LRP6O75581 1613 aa16.69■□□□□ 0.26
CDK5R1-202ENST00000584716 HOXC9P31274 260 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms