RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 TRPM3Q9HCF6 1732 aaPredicted RBP25.09■■□□□ 1.61
RFFL-211ENST00000584541 AHDC1Q5TGY3 1603 aaPredicted RBP25.08■■□□□ 1.61
RFFL-211ENST00000584541 PHLPP1O60346 1717 aa25.07■■□□□ 1.6
RFFL-211ENST00000584541 TTC21AQ8NDW8 1320 aa25.07■■□□□ 1.6
RFFL-211ENST00000584541 PER1O15534 1290 aaPredicted RBP25.06■■□□□ 1.6
RFFL-211ENST00000584541 PAK3O75914 559 aaPredicted RBP25.06■■□□□ 1.6
RFFL-211ENST00000584541 XPCQ01831 940 aaPredicted RBP25.06■■□□□ 1.6
RFFL-211ENST00000584541 DDX17Q92841 729 aaKnown RBP25.06■■□□□ 1.6
RFFL-211ENST00000584541 PXDNQ92626 1479 aa25.06■■□□□ 1.6
RFFL-211ENST00000584541 CGNL1Q0VF96 1302 aa25.06■■□□□ 1.6
RFFL-211ENST00000584541 TTC21BQ7Z4L5 1316 aa25.06■■□□□ 1.6
RFFL-211ENST00000584541 SSH2Q76I76 1423 aa25.05■■□□□ 1.6
RFFL-211ENST00000584541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.05■■□□□ 1.63e-6■■□□□ 13.9
RFFL-211ENST00000584541 SBNO1A3KN83 1393 aa25.04■■□□□ 1.6
RFFL-211ENST00000584541 SOS2Q07890 1332 aaPredicted RBP25.03■■□□□ 1.6
RFFL-211ENST00000584541 ANKRD26Q9UPS8 1709 aa25.02■■□□□ 1.6
RFFL-211ENST00000584541 ALS2Q96Q42 1657 aa25.01■■□□□ 1.59
RFFL-211ENST00000584541 NSD2O96028 1365 aa25.01■■□□□ 1.59
RFFL-211ENST00000584541 PIK3C2AO00443 1686 aa25.01■■□□□ 1.59
RFFL-211ENST00000584541 TNS3Q68CZ2 1445 aa24.99■■□□□ 1.59
RFFL-211ENST00000584541 ABTB2Q8N961 1025 aa24.99■■□□□ 1.59
RFFL-211ENST00000584541 NPC1L1Q9UHC9 1359 aa24.99■■□□□ 1.59
RFFL-211ENST00000584541 AMER1Q5JTC6 1135 aaPredicted RBP24.98■■□□□ 1.59
RFFL-211ENST00000584541 LMOD2Q6P5Q4 547 aa24.98■■□□□ 1.59
RFFL-211ENST00000584541 COL16A1Q07092 1604 aaPredicted RBP24.97■■□□□ 1.59
RFFL-211ENST00000584541 SPATA31A3Q5VYP0 1347 aa24.97■■□□□ 1.59
RFFL-211ENST00000584541 FYB1O15117 783 aa24.97■■□□□ 1.59
RFFL-211ENST00000584541 DIEXFQ68CQ4 756 aaKnown RBP24.97■■□□□ 1.59
RFFL-211ENST00000584541 NME9Q86XW9 330 aa24.97■■□□□ 1.59
RFFL-211ENST00000584541 ARHGEF10O15013 1369 aa24.96■■□□□ 1.59
RFFL-211ENST00000584541 LRRC59Q96AG4 307 aaKnown RBP24.96■■□□□ 1.59
RFFL-211ENST00000584541 USP54Q70EL1 1684 aa24.96■■□□□ 1.59
RFFL-211ENST00000584541 CC2D1BQ5T0F9 858 aaKnown RBP24.95■■□□□ 1.58
RFFL-211ENST00000584541 GGNBP2Q9H3C7 697 aa24.95■■□□□ 1.58
RFFL-211ENST00000584541 NLRP6P59044 892 aa24.94■■□□□ 1.58
RFFL-211ENST00000584541 CNGB1Q14028 1251 aaPredicted RBP24.94■■□□□ 1.58
RFFL-211ENST00000584541 COG3Q96JB2 828 aa24.94■■□□□ 1.58
RFFL-211ENST00000584541 NLRP13Q86W25 1043 aa24.93■■□□□ 1.58
RFFL-211ENST00000584541 USP31Q70CQ4 1352 aa24.93■■□□□ 1.58
RFFL-211ENST00000584541 ANP32CO43423 234 aa24.91■■□□□ 1.58
RFFL-211ENST00000584541 NUTM2GQ5VZR2 741 aa24.91■■□□□ 1.58
RFFL-211ENST00000584541 MORC1Q86VD1 984 aa24.91■■□□□ 1.58
RFFL-211ENST00000584541 MARF1Q9Y4F3 1742 aaKnown RBP24.91■■□□□ 1.58
RFFL-211ENST00000584541 OVOS2A0A0J9YW53 1432 aa24.9■■□□□ 1.58
RFFL-211ENST00000584541 OVOS2Q6IE36 1432 aa24.9■■□□□ 1.58
RFFL-211ENST00000584541 ZRANB1Q9UGI0 708 aa24.89■■□□□ 1.58
RFFL-211ENST00000584541 MED1Q15648 1581 aaPredicted RBP24.88■■□□□ 1.57
RFFL-211ENST00000584541 COL22A1Q8NFW1 1626 aaPredicted RBP24.86■■□□□ 1.57
RFFL-211ENST00000584541 SHPRHQ149N8 1683 aa24.86■■□□□ 1.57
RFFL-211ENST00000584541 RALBP1Q15311 655 aa24.86■■□□□ 1.57
RFFL-211ENST00000584541 PHRF1Q9P1Y6 1649 aaKnown RBP24.86■■□□□ 1.57
RFFL-211ENST00000584541 HSPA1LP34931 641 aa24.85■■□□□ 1.57
RFFL-211ENST00000584541 CRYBG1Q9Y4K1 1723 aa24.85■■□□□ 1.57
RFFL-211ENST00000584541 PNPLA6Q8IY17 1366 aa24.84■■□□□ 1.57
RFFL-211ENST00000584541 PARD3Q8TEW0 1356 aa24.84■■□□□ 1.57
RFFL-211ENST00000584541 KCNH5Q8NCM2 988 aa24.84■■□□□ 1.57
RFFL-211ENST00000584541 SLIT3O75094 1523 aa24.84■■□□□ 1.57
RFFL-211ENST00000584541 USP19O94966 1318 aa24.84■■□□□ 1.57
RFFL-211ENST00000584541 ABCA3Q99758 1704 aa24.83■■□□□ 1.57
RFFL-211ENST00000584541 PLEKHG5O94827 1062 aa24.83■■□□□ 1.57
RFFL-211ENST00000584541 PRKRIP1Q9H875 184 aaPredicted RBP24.83■■□□□ 1.57
RFFL-211ENST00000584541 JCADQ9P266 1359 aa24.82■■□□□ 1.56
RFFL-211ENST00000584541 MAP2P11137 1827 aaKnown RBP24.82■■□□□ 1.56
RFFL-211ENST00000584541 TNNT2P45379 298 aaPredicted RBP24.81■■□□□ 1.56
RFFL-211ENST00000584541 HAP1P54257 671 aaPredicted RBP24.81■■□□□ 1.56
RFFL-211ENST00000584541 SOX12O15370 315 aa24.79■■□□□ 1.56
RFFL-211ENST00000584541 LTN1O94822 1766 aa24.78■■□□□ 1.56
RFFL-211ENST00000584541 GCP02774 474 aa24.78■■□□□ 1.56
RFFL-211ENST00000584541 CABLES1Q8TDN4 633 aa24.78■■□□□ 1.56
RFFL-211ENST00000584541 AATKQ6ZMQ8 1374 aa24.78■■□□□ 1.56
RFFL-211ENST00000584541 MYBBP1AQ9BQG0 1328 aaKnown RBP24.77■■□□□ 1.56
RFFL-211ENST00000584541 NFAT5O94916 1531 aa24.76■■□□□ 1.55
RFFL-211ENST00000584541 PPP2R1AP30153 589 aa24.74■■□□□ 1.55
RFFL-211ENST00000584541 SPATA31A6Q5VVP1 1343 aa24.72■■□□□ 1.55
RFFL-211ENST00000584541 FBLN1P23142 703 aa24.7■■□□□ 1.54
RFFL-211ENST00000584541 ZC3H6P61129 1189 aaKnown RBP24.7■■□□□ 1.54
RFFL-211ENST00000584541 RRS1Q15050 365 aaKnown RBP24.7■■□□□ 1.54
RFFL-211ENST00000584541 ZBTB7CA1YPR0 619 aa24.69■■□□□ 1.54
RFFL-211ENST00000584541 NUTM2BA6NNL0 878 aaPredicted RBP24.69■■□□□ 1.54
RFFL-211ENST00000584541 NUTM2EB1AL46 878 aaPredicted RBP24.69■■□□□ 1.54
RFFL-211ENST00000584541 NUTM2AQ8IVF1 878 aaPredicted RBP24.69■■□□□ 1.54
RFFL-211ENST00000584541 POLKQ9UBT6 870 aa24.69■■□□□ 1.54
RFFL-211ENST00000584541 CPDO75976 1380 aa24.68■■□□□ 1.54
RFFL-211ENST00000584541 MAP3K19Q56UN5 1328 aa24.68■■□□□ 1.54
RFFL-211ENST00000584541 PPM1GO15355 546 aaPredicted RBP24.68■■□□□ 1.54
RFFL-211ENST00000584541 AMPHP49418 695 aa24.68■■□□□ 1.54
RFFL-211ENST00000584541 MTHFSP49914 203 aa24.68■■□□□ 1.54
RFFL-211ENST00000584541 SMG6Q86US8 1419 aaKnown RBP24.68■■□□□ 1.54
RFFL-211ENST00000584541 KIF24Q5T7B8 1368 aa24.67■■□□□ 1.54
RFFL-211ENST00000584541 ARHGEF25Q86VW2 580 aa24.67■■□□□ 1.54
RFFL-211ENST00000584541 EMILIN1Q9Y6C2 1016 aa24.67■■□□□ 1.54
RFFL-211ENST00000584541 KIAA0232Q92628 1395 aa24.67■■□□□ 1.54
RFFL-211ENST00000584541 MIER1Q8N108 512 aa24.66■■□□□ 1.54
RFFL-211ENST00000584541 CFAP53Q96M91 514 aa24.66■■□□□ 1.54
RFFL-211ENST00000584541 PRDM11Q9NQV5 511 aa24.66■■□□□ 1.54
RFFL-211ENST00000584541 PEAK1Q9H792 1746 aa24.66■■□□□ 1.54
RFFL-211ENST00000584541 RTL1A6NKG5 1358 aa24.66■■□□□ 1.54
RFFL-211ENST00000584541 CDK12Q9NYV4 1490 aaPredicted RBP24.65■■□□□ 1.54
RFFL-211ENST00000584541 ABCC6O95255 1503 aa24.65■■□□□ 1.54
RFFL-211ENST00000584541 FLT4P35916 1363 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms