RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 CACNB1Q02641 598 aaPredicted RBP11.55□□□□□ -0.56
ERBB2-216ENST00000584014 CNGB1Q14028 1251 aaPredicted RBP11.55□□□□□ -0.56
ERBB2-216ENST00000584014 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.55□□□□□ -0.56
ERBB2-216ENST00000584014 ARXQ96QS3 562 aa11.55□□□□□ -0.56
ERBB2-216ENST00000584014 NHSL1Q5SYE7 1610 aa11.55□□□□□ -0.56
ERBB2-216ENST00000584014 TOPAZ1Q8N9V7 1692 aa11.55□□□□□ -0.56
ERBB2-216ENST00000584014 KTN1Q86UP2 1357 aaKnown RBP11.54□□□□□ -0.56
ERBB2-216ENST00000584014 KIF7Q2M1P5 1343 aa11.54□□□□□ -0.56
ERBB2-216ENST00000584014 AHDC1Q5TGY3 1603 aaPredicted RBP11.53□□□□□ -0.56
ERBB2-216ENST00000584014 ABTB2Q8N961 1025 aa11.53□□□□□ -0.56
ERBB2-216ENST00000584014 SOS2Q07890 1332 aaPredicted RBP11.53□□□□□ -0.56
ERBB2-216ENST00000584014 ZBTB7CA1YPR0 619 aa11.52□□□□□ -0.57
ERBB2-216ENST00000584014 SOX12O15370 315 aa11.52□□□□□ -0.57
ERBB2-216ENST00000584014 MEX3CQ5U5Q3 659 aaKnown RBP11.52□□□□□ -0.57
ERBB2-216ENST00000584014 CABLES1Q8TDN4 633 aa11.52□□□□□ -0.57
ERBB2-216ENST00000584014 PUS7Q96PZ0 661 aaKnown RBP11.52□□□□□ -0.57
ERBB2-216ENST00000584014 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.57
ERBB2-216ENST00000584014 COL16A1Q07092 1604 aaPredicted RBP11.52□□□□□ -0.57
ERBB2-216ENST00000584014 PXDNQ92626 1479 aa11.51□□□□□ -0.57
ERBB2-216ENST00000584014 ADAMTS2O95450 1211 aa11.51□□□□□ -0.57
ERBB2-216ENST00000584014 PANK3Q9H999 370 aa11.51□□□□□ -0.57
ERBB2-216ENST00000584014 SPATA31A3Q5VYP0 1347 aa11.51□□□□□ -0.57
ERBB2-216ENST00000584014 POLR3AO14802 1390 aaPredicted RBP11.51□□□□□ -0.57
ERBB2-216ENST00000584014 JCADQ9P266 1359 aa11.51□□□□□ -0.57
ERBB2-216ENST00000584014 AKAP12Q02952 1782 aa11.5□□□□□ -0.57
ERBB2-216ENST00000584014 NLRP6P59044 892 aa11.5□□□□□ -0.57
ERBB2-216ENST00000584014 WASHC2AQ641Q2 1341 aa11.5□□□□□ -0.57
ERBB2-216ENST00000584014 A0A1W2PP64 1363 aa11.5□□□□□ -0.57
ERBB2-216ENST00000584014 CCDC7Q96M83 1385 aa11.5□□□□□ -0.57
ERBB2-216ENST00000584014 USP6P35125 1406 aa11.5□□□□□ -0.57
ERBB2-216ENST00000584014 NME9Q86XW9 330 aa11.49□□□□□ -0.57
ERBB2-216ENST00000584014 ZRANB1Q9UGI0 708 aa11.49□□□□□ -0.57
ERBB2-216ENST00000584014 TTC21BQ7Z4L5 1316 aa11.49□□□□□ -0.57
ERBB2-216ENST00000584014 TNS3Q68CZ2 1445 aa11.49□□□□□ -0.57
ERBB2-216ENST00000584014 SBNO1A3KN83 1393 aa11.48□□□□□ -0.57
ERBB2-216ENST00000584014 PNPLA6Q8IY17 1366 aa11.48□□□□□ -0.57
ERBB2-216ENST00000584014 NINLQ9Y2I6 1382 aa11.48□□□□□ -0.57
ERBB2-216ENST00000584014 TRPM3Q9HCF6 1732 aaPredicted RBP11.47□□□□□ -0.57
ERBB2-216ENST00000584014 MYOM1P52179 1685 aa11.47□□□□□ -0.57
ERBB2-216ENST00000584014 CD163L1Q9NR16 1453 aa11.47□□□□□ -0.57
ERBB2-216ENST00000584014 CPSF1Q10570 1443 aaKnown RBP11.47□□□□□ -0.57
ERBB2-216ENST00000584014 ARHGEF10O15013 1369 aa11.47□□□□□ -0.57
ERBB2-216ENST00000584014 ANKRD36BQ8N2N9 1353 aa11.47□□□□□ -0.57
ERBB2-216ENST00000584014 ILDR2Q71H61 639 aa11.47□□□□□ -0.57
ERBB2-216ENST00000584014 NLRP13Q86W25 1043 aa11.47□□□□□ -0.57
ERBB2-216ENST00000584014 RNF39Q9H2S5 420 aa11.47□□□□□ -0.57
ERBB2-216ENST00000584014 GGNBP2Q9H3C7 697 aa11.47□□□□□ -0.57
ERBB2-216ENST00000584014 MON2Q7Z3U7 1717 aa11.46□□□□□ -0.57
ERBB2-216ENST00000584014 NSD3Q9BZ95 1437 aa11.46□□□□□ -0.57
ERBB2-216ENST00000584014 ZNF316A6NFI3 1004 aaPredicted RBP11.46□□□□□ -0.57
ERBB2-216ENST00000584014 DDX10Q13206 875 aaKnown RBP11.46□□□□□ -0.57
ERBB2-216ENST00000584014 CARD14Q9BXL6 1004 aa11.46□□□□□ -0.57
ERBB2-216ENST00000584014 TTC21AQ8NDW8 1320 aa11.45□□□□□ -0.58
ERBB2-216ENST00000584014 ZC3H6P61129 1189 aaKnown RBP11.45□□□□□ -0.58
ERBB2-216ENST00000584014 C8orf37Q96NL8 207 aa11.45□□□□□ -0.58
ERBB2-216ENST00000584014 KNSTRNQ9Y448 316 aa11.45□□□□□ -0.58
ERBB2-216ENST00000584014 SHPRHQ149N8 1683 aa11.45□□□□□ -0.58
ERBB2-216ENST00000584014 EDC4Q6P2E9 1401 aaKnown RBP11.44□□□□□ -0.58
ERBB2-216ENST00000584014 SPATA31A6Q5VVP1 1343 aa11.44□□□□□ -0.58
ERBB2-216ENST00000584014 TNNT2P45379 298 aaPredicted RBP11.44□□□□□ -0.58
ERBB2-216ENST00000584014 NGLY1Q96IV0 654 aa11.44□□□□□ -0.58
ERBB2-216ENST00000584014 COG3Q96JB2 828 aa11.44□□□□□ -0.58
ERBB2-216ENST00000584014 ALS2Q96Q42 1657 aa11.43□□□□□ -0.58
ERBB2-216ENST00000584014 CC2D1BQ5T0F9 858 aaKnown RBP11.43□□□□□ -0.58
ERBB2-216ENST00000584014 BRD4O60885 1362 aaPredicted RBP11.42□□□□□ -0.58
ERBB2-216ENST00000584014 CGNL1Q0VF96 1302 aa11.42□□□□□ -0.58
ERBB2-216ENST00000584014 CHRNA2Q15822 529 aa11.42□□□□□ -0.58
ERBB2-216ENST00000584014 PIK3C2AO00443 1686 aa11.42□□□□□ -0.58
ERBB2-216ENST00000584014 KIF20BQ96Q89 1820 aa11.42□□□□□ -0.58
ERBB2-216ENST00000584014 NRKQ7Z2Y5 1582 aa11.41□□□□□ -0.58
ERBB2-216ENST00000584014 FYB1O15117 783 aa11.41□□□□□ -0.58
ERBB2-216ENST00000584014 FBLN1P23142 703 aa11.41□□□□□ -0.58
ERBB2-216ENST00000584014 ERICH6Q7L0X2 663 aa11.41□□□□□ -0.58
ERBB2-216ENST00000584014 PRDM11Q9NQV5 511 aa11.41□□□□□ -0.58
ERBB2-216ENST00000584014 SSH2Q76I76 1423 aa11.41□□□□□ -0.58
ERBB2-216ENST00000584014 LRP6O75581 1613 aa11.4□□□□□ -0.58
ERBB2-216ENST00000584014 COL22A1Q8NFW1 1626 aaPredicted RBP11.4□□□□□ -0.58
ERBB2-216ENST00000584014 SOCS7O14512 581 aa11.4□□□□□ -0.58
ERBB2-216ENST00000584014 PPM1GO15355 546 aaPredicted RBP11.4□□□□□ -0.58
ERBB2-216ENST00000584014 GCP02774 474 aa11.4□□□□□ -0.58
ERBB2-216ENST00000584014 MED1Q15648 1581 aaPredicted RBP11.4□□□□□ -0.58
ERBB2-216ENST00000584014 MORC1Q86VD1 984 aa11.39□□□□□ -0.59
ERBB2-216ENST00000584014 KCNH5Q8NCM2 988 aa11.39□□□□□ -0.59
ERBB2-216ENST00000584014 CCDC9Q9Y3X0 531 aaKnown RBP11.39□□□□□ -0.59
ERBB2-216ENST00000584014 KIAA0232Q92628 1395 aa11.39□□□□□ -0.59
ERBB2-216ENST00000584014 PHRF1Q9P1Y6 1649 aaKnown RBP11.38□□□□□ -0.59
ERBB2-216ENST00000584014 ABCA3Q99758 1704 aa11.38□□□□□ -0.59
ERBB2-216ENST00000584014 FAM83GA6ND36 823 aa11.38□□□□□ -0.59
ERBB2-216ENST00000584014 EVA1CP58658 441 aa11.38□□□□□ -0.59
ERBB2-216ENST00000584014 STRN4Q9NRL3 753 aa11.38□□□□□ -0.59
ERBB2-216ENST00000584014 AFF2P51816 1311 aa11.37□□□□□ -0.59
ERBB2-216ENST00000584014 RRS1Q15050 365 aaKnown RBP11.37□□□□□ -0.59
ERBB2-216ENST00000584014 BTG4Q9NY30 223 aa11.37□□□□□ -0.59
ERBB2-216ENST00000584014 USP21Q9UK80 565 aa11.37□□□□□ -0.59
ERBB2-216ENST00000584014 USP19O94966 1318 aa11.36□□□□□ -0.59
ERBB2-216ENST00000584014 MARF1Q9Y4F3 1742 aaKnown RBP11.36□□□□□ -0.59
ERBB2-216ENST00000584014 AMPHP49418 695 aa11.36□□□□□ -0.59
ERBB2-216ENST00000584014 LTV1Q96GA3 475 aaPredicted RBP11.36□□□□□ -0.59
ERBB2-216ENST00000584014 USP31Q70CQ4 1352 aa11.36□□□□□ -0.59
ERBB2-216ENST00000584014 CRYBG1Q9Y4K1 1723 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms