RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, human

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-217	ENST00000583705	CHMP5	Q9NZZ3	219 aa		13.48	□□□□□ -0.25
MSI2-217	ENST00000583705	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.48	□□□□□ -0.25
MSI2-217	ENST00000583705	EXOC6	Q8TAG9	804 aa		13.48	□□□□□ -0.25
MSI2-217	ENST00000583705	RNF214	Q8ND24	703 aa		13.48	□□□□□ -0.25
MSI2-217	ENST00000583705	NINL	Q9Y2I6	1382 aa		13.48	□□□□□ -0.25
MSI2-217	ENST00000583705		E9PSI1	815 aa		13.48	□□□□□ -0.25
MSI2-217	ENST00000583705	MPHOSPH8	Q99549	860 aa		13.48	□□□□□ -0.25
MSI2-217	ENST00000583705	HSP90AB3P	Q58FF7	597 aa		13.47	□□□□□ -0.25
MSI2-217	ENST00000583705	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.47	□□□□□ -0.25
MSI2-217	ENST00000583705	PRDM2	Q13029	1718 aa		13.47	□□□□□ -0.25
MSI2-217	ENST00000583705	CCDC144A	A2RUR9	1427 aa		13.47	□□□□□ -0.25
MSI2-217	ENST00000583705	FILIP1L	Q4L180	1135 aa		13.47	□□□□□ -0.25
MSI2-217	ENST00000583705	FAM177A1	Q8N128	213 aa	Predicted RBP	13.47	□□□□□ -0.25
MSI2-217	ENST00000583705	GGNBP2	Q9H3C7	697 aa		13.47	□□□□□ -0.25
MSI2-217	ENST00000583705	PODXL2	Q9NZ53	605 aa		13.47	□□□□□ -0.25
MSI2-217	ENST00000583705	TIMELESS	Q9UNS1	1208 aa		13.47	□□□□□ -0.25
MSI2-217	ENST00000583705	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
MSI2-217	ENST00000583705	ERC1	Q8IUD2	1116 aa		13.47	□□□□□ -0.25
MSI2-217	ENST00000583705	CCDC158	Q5M9N0	1113 aa		13.47	□□□□□ -0.25
MSI2-217	ENST00000583705	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.47	□□□□□ -0.25
MSI2-217	ENST00000583705	DDX19B	Q9UMR2	479 aa		13.47	□□□□□ -0.25
MSI2-217	ENST00000583705	LIG1	P18858	919 aa		13.47	□□□□□ -0.25
MSI2-217	ENST00000583705	SOGA3	Q5TF21	947 aa		13.47	□□□□□ -0.25
MSI2-217	ENST00000583705	ROCK1	Q13464	1354 aa		13.46	□□□□□ -0.25
MSI2-217	ENST00000583705	CCDC69	A6NI79	296 aa		13.46	□□□□□ -0.25
MSI2-217	ENST00000583705	XPC	Q01831	940 aa	Predicted RBP	13.46	□□□□□ -0.25
MSI2-217	ENST00000583705	DZIP1L	Q8IYY4	767 aa	Known RBP	13.46	□□□□□ -0.25
MSI2-217	ENST00000583705	SMARCE1	Q969G3	411 aa		13.46	□□□□□ -0.25
MSI2-217	ENST00000583705	ANKRD18A	Q8IVF6	992 aa		13.46	□□□□□ -0.25
MSI2-217	ENST00000583705	KIF15	Q9NS87	1388 aa		13.46	□□□□□ -0.25
MSI2-217	ENST00000583705	SURF6	O75683	361 aa	Known RBP	13.46	□□□□□ -0.25
MSI2-217	ENST00000583705	DRC1	Q96MC2	740 aa		13.46	□□□□□ -0.25
MSI2-217	ENST00000583705	FAM193A	P78312	1265 aa		13.46	□□□□□ -0.26
MSI2-217	ENST00000583705	ERLIN2	O94905	339 aa		13.45	□□□□□ -0.26
MSI2-217	ENST00000583705	NOM1	Q5C9Z4	860 aa	Known RBP	13.45	□□□□□ -0.26
MSI2-217	ENST00000583705	SPC24	Q8NBT2	197 aa		13.45	□□□□□ -0.26
MSI2-217	ENST00000583705	TNIK	Q9UKE5	1360 aa		13.45	□□□□□ -0.26
MSI2-217	ENST00000583705	API5	Q9BZZ5	524 aa	Known RBP	13.45	□□□□□ -0.26
MSI2-217	ENST00000583705	SOGA1	O94964	1423 aa		13.45	□□□□□ -0.26
MSI2-217	ENST00000583705	RAB3GAP2	Q9H2M9	1393 aa		13.45	□□□□□ -0.26
MSI2-217	ENST00000583705	GBP2	P32456	591 aa	Predicted RBP	13.44	□□□□□ -0.26
MSI2-217	ENST00000583705	C1orf115	Q9H7X2	142 aa		13.44	□□□□□ -0.26
MSI2-217	ENST00000583705	PSMA5	P28066	241 aa		13.44	□□□□□ -0.26
MSI2-217	ENST00000583705	TRIM5	Q9C035	493 aa		13.44	□□□□□ -0.26
MSI2-217	ENST00000583705	GPRASP1	Q5JY77	1395 aa		13.44	□□□□□ -0.26
MSI2-217	ENST00000583705	RSPH4A	Q5TD94	716 aa		13.44	□□□□□ -0.26
MSI2-217	ENST00000583705	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.44	□□□□□ -0.26
MSI2-217	ENST00000583705	WDHD1	O75717	1129 aa	Predicted RBP	13.44	□□□□□ -0.26
MSI2-217	ENST00000583705	DES	P17661	470 aa		13.44	□□□□□ -0.26
MSI2-217	ENST00000583705	ANAPC15	P60006	121 aa		13.43	□□□□□ -0.26
MSI2-217	ENST00000583705	CT47B1	P0C2W7	299 aa	Predicted RBP	13.43	□□□□□ -0.26
MSI2-217	ENST00000583705	CECR2	Q9BXF3	1484 aa		13.43	□□□□□ -0.26
MSI2-217	ENST00000583705	TMEM132E	Q6IEE7	984 aa		13.43	□□□□□ -0.26
MSI2-217	ENST00000583705	UACA	Q9BZF9	1416 aa		13.43	□□□□□ -0.26
MSI2-217	ENST00000583705	TAF3	Q5VWG9	929 aa		13.43	□□□□□ -0.26
MSI2-217	ENST00000583705	KIN	O60870	393 aa	Known RBP	13.42	□□□□□ -0.26
MSI2-217	ENST00000583705	TRIM21	P19474	475 aa	Known RBP	13.42	□□□□□ -0.26
MSI2-217	ENST00000583705	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.42	□□□□□ -0.26
MSI2-217	ENST00000583705	COMMD10	Q9Y6G5	202 aa		13.42	□□□□□ -0.26
MSI2-217	ENST00000583705	TAT	P17735	454 aa	Predicted RBP	13.42	□□□□□ -0.26
MSI2-217	ENST00000583705	PDE4A	P27815	886 aa		13.42	□□□□□ -0.26
MSI2-217	ENST00000583705	CLASRP	Q8N2M8	674 aa	Known RBP	13.42	□□□□□ -0.26
MSI2-217	ENST00000583705	RAI14	Q9P0K7	980 aa		13.42	□□□□□ -0.26
MSI2-217	ENST00000583705	SERPINC1	P01008	464 aa		13.42	□□□□□ -0.26
MSI2-217	ENST00000583705	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.42	□□□□□ -0.26
MSI2-217	ENST00000583705	GOLGA6L10	A6NI86	522 aa		13.41	□□□□□ -0.26
MSI2-217	ENST00000583705	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.41	□□□□□ -0.26	2e-6	■■■□□ 16.7
MSI2-217	ENST00000583705	NFKBIB	Q15653	356 aa		13.41	□□□□□ -0.26
MSI2-217	ENST00000583705	WWC3	Q9ULE0	1092 aa		13.41	□□□□□ -0.26
MSI2-217	ENST00000583705	TDO2	P48775	406 aa		13.41	□□□□□ -0.26
MSI2-217	ENST00000583705	STK38	Q15208	465 aa		13.41	□□□□□ -0.26
MSI2-217	ENST00000583705	MPND	Q8N594	471 aa		13.41	□□□□□ -0.26
MSI2-217	ENST00000583705	PUS7	Q96PZ0	661 aa	Known RBP	13.41	□□□□□ -0.26
MSI2-217	ENST00000583705	JPH4	Q96JJ6	628 aa		13.4	□□□□□ -0.26
MSI2-217	ENST00000583705	TMOD2	Q9NZR1	351 aa		13.4	□□□□□ -0.26
MSI2-217	ENST00000583705	CCDC112	Q8NEF3	446 aa		13.4	□□□□□ -0.26
MSI2-217	ENST00000583705	VTI1A	Q96AJ9	217 aa		13.4	□□□□□ -0.26
MSI2-217	ENST00000583705	EZR	P15311	586 aa	Known RBP	13.4	□□□□□ -0.26
MSI2-217	ENST00000583705	DHX8	Q14562	1220 aa	Known RBP	13.4	□□□□□ -0.26
MSI2-217	ENST00000583705	CCDC57	Q2TAC2	916 aa		13.4	□□□□□ -0.26
MSI2-217	ENST00000583705	PANK1	Q8TE04	598 aa		13.4	□□□□□ -0.26
MSI2-217	ENST00000583705	ADAMTS2	O95450	1211 aa		13.4	□□□□□ -0.27
MSI2-217	ENST00000583705	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.39	□□□□□ -0.27
MSI2-217	ENST00000583705	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.39	□□□□□ -0.27
MSI2-217	ENST00000583705	CCDC30	Q5VVM6	783 aa		13.39	□□□□□ -0.27
MSI2-217	ENST00000583705	OSCAR	Q8IYS5	282 aa		13.39	□□□□□ -0.27
MSI2-217	ENST00000583705	ABCF2	Q9UG63	623 aa		13.39	□□□□□ -0.27
MSI2-217	ENST00000583705	SMG6	Q86US8	1419 aa	Known RBP	13.39	□□□□□ -0.27
MSI2-217	ENST00000583705	LRP2BP	Q9P2M1	347 aa		13.39	□□□□□ -0.27
MSI2-217	ENST00000583705	STIM1	Q13586	685 aa		13.39	□□□□□ -0.27
MSI2-217	ENST00000583705	SLC4A8	Q2Y0W8	1093 aa		13.38	□□□□□ -0.27
MSI2-217	ENST00000583705	UBA5	Q9GZZ9	404 aa		13.38	□□□□□ -0.27
MSI2-217	ENST00000583705	LRRFIP2	Q9Y608	721 aa	Known RBP	13.38	□□□□□ -0.27
MSI2-217	ENST00000583705	GNAI1	P63096	354 aa		13.38	□□□□□ -0.27
MSI2-217	ENST00000583705	ANKIB1	Q9P2G1	1089 aa		13.38	□□□□□ -0.27
MSI2-217	ENST00000583705	PHLDB1	Q86UU1	1377 aa		13.38	□□□□□ -0.27
MSI2-217	ENST00000583705	RRP1	P56182	461 aa	Known RBP	13.38	□□□□□ -0.27
MSI2-217	ENST00000583705	NACAP1	Q9BZK3	213 aa		13.38	□□□□□ -0.27
MSI2-217	ENST00000583705	ERCC4	Q92889	916 aa	Predicted RBP	13.38	□□□□□ -0.27
MSI2-217	ENST00000583705	FIBP	O43427	364 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms