RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 PXDNQ92626 1479 aa16.96■□□□□ 0.31
CDH8-208ENST00000582980 TRPM3Q9HCF6 1732 aaPredicted RBP16.96■□□□□ 0.3
CDH8-208ENST00000582980 SSH2Q76I76 1423 aa16.96■□□□□ 0.3
CDH8-208ENST00000582980 TTC21BQ7Z4L5 1316 aa16.95■□□□□ 0.3
CDH8-208ENST00000582980 SBNO1A3KN83 1393 aa16.94■□□□□ 0.3
CDH8-208ENST00000582980 NSD2O96028 1365 aa16.94■□□□□ 0.3
CDH8-208ENST00000582980 PAK3O75914 559 aaPredicted RBP16.94■□□□□ 0.3
CDH8-208ENST00000582980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.94■□□□□ 0.3
CDH8-208ENST00000582980 SOS2Q07890 1332 aaPredicted RBP16.94■□□□□ 0.3
CDH8-208ENST00000582980 NPC1L1Q9UHC9 1359 aa16.93■□□□□ 0.3
CDH8-208ENST00000582980 XPCQ01831 940 aaPredicted RBP16.93■□□□□ 0.3
CDH8-208ENST00000582980 DDX17Q92841 729 aaKnown RBP16.93■□□□□ 0.3
CDH8-208ENST00000582980 PHLPP1O60346 1717 aa16.93■□□□□ 0.3
CDH8-208ENST00000582980 ANKRD26Q9UPS8 1709 aa16.92■□□□□ 0.3
CDH8-208ENST00000582980 PIK3C2AO00443 1686 aa16.91■□□□□ 0.3
CDH8-208ENST00000582980 ALS2Q96Q42 1657 aa16.91■□□□□ 0.3
CDH8-208ENST00000582980 TNS3Q68CZ2 1445 aa16.91■□□□□ 0.3
CDH8-208ENST00000582980 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
CDH8-208ENST00000582980 DIEXFQ68CQ4 756 aaKnown RBP16.91■□□□□ 0.3
CDH8-208ENST00000582980 ARHGEF10O15013 1369 aa16.9■□□□□ 0.3
CDH8-208ENST00000582980 ABTB2Q8N961 1025 aa16.9■□□□□ 0.3
CDH8-208ENST00000582980 USP54Q70EL1 1684 aa16.89■□□□□ 0.29
CDH8-208ENST00000582980 FYB1O15117 783 aa16.89■□□□□ 0.29
CDH8-208ENST00000582980 NME9Q86XW9 330 aa16.89■□□□□ 0.29
CDH8-208ENST00000582980 SPATA31A3Q5VYP0 1347 aa16.89■□□□□ 0.29
CDH8-208ENST00000582980 COL16A1Q07092 1604 aaPredicted RBP16.88■□□□□ 0.29
CDH8-208ENST00000582980 CC2D1BQ5T0F9 858 aaKnown RBP16.88■□□□□ 0.29
CDH8-208ENST00000582980 LRRC59Q96AG4 307 aaKnown RBP16.88■□□□□ 0.29
CDH8-208ENST00000582980 USP31Q70CQ4 1352 aa16.88■□□□□ 0.29
CDH8-208ENST00000582980 LMOD2Q6P5Q4 547 aa16.87■□□□□ 0.29
CDH8-208ENST00000582980 COG3Q96JB2 828 aa16.87■□□□□ 0.29
CDH8-208ENST00000582980 GGNBP2Q9H3C7 697 aa16.87■□□□□ 0.29
CDH8-208ENST00000582980 OVOS2A0A0J9YW53 1432 aa16.87■□□□□ 0.29
CDH8-208ENST00000582980 OVOS2Q6IE36 1432 aa16.87■□□□□ 0.29
CDH8-208ENST00000582980 ANP32CO43423 234 aa16.86■□□□□ 0.29
CDH8-208ENST00000582980 NLRP6P59044 892 aa16.86■□□□□ 0.29
CDH8-208ENST00000582980 NLRP13Q86W25 1043 aa16.86■□□□□ 0.29
CDH8-208ENST00000582980 CNGB1Q14028 1251 aaPredicted RBP16.85■□□□□ 0.29
CDH8-208ENST00000582980 MORC1Q86VD1 984 aa16.85■□□□□ 0.29
CDH8-208ENST00000582980 MED1Q15648 1581 aaPredicted RBP16.85■□□□□ 0.29
CDH8-208ENST00000582980 RALBP1Q15311 655 aa16.84■□□□□ 0.29
CDH8-208ENST00000582980 PARD3Q8TEW0 1356 aa16.83■□□□□ 0.28
CDH8-208ENST00000582980 MARF1Q9Y4F3 1742 aaKnown RBP16.83■□□□□ 0.28
CDH8-208ENST00000582980 NUTM2GQ5VZR2 741 aa16.82■□□□□ 0.28
CDH8-208ENST00000582980 ZRANB1Q9UGI0 708 aa16.82■□□□□ 0.28
CDH8-208ENST00000582980 COL22A1Q8NFW1 1626 aaPredicted RBP16.81■□□□□ 0.28
CDH8-208ENST00000582980 SLIT3O75094 1523 aa16.81■□□□□ 0.28
CDH8-208ENST00000582980 USP19O94966 1318 aa16.81■□□□□ 0.28
CDH8-208ENST00000582980 KCNH5Q8NCM2 988 aa16.81■□□□□ 0.28
CDH8-208ENST00000582980 PRKRIP1Q9H875 184 aaPredicted RBP16.81■□□□□ 0.28
CDH8-208ENST00000582980 PHRF1Q9P1Y6 1649 aaKnown RBP16.81■□□□□ 0.28
CDH8-208ENST00000582980 PNPLA6Q8IY17 1366 aa16.8■□□□□ 0.28
CDH8-208ENST00000582980 CRYBG1Q9Y4K1 1723 aa16.8■□□□□ 0.28
CDH8-208ENST00000582980 FBXO41Q8TF61 875 aa16.8■□□□□ 0.28
CDH8-208ENST00000582980 SHPRHQ149N8 1683 aa16.8■□□□□ 0.28
CDH8-208ENST00000582980 JCADQ9P266 1359 aa16.79■□□□□ 0.28
CDH8-208ENST00000582980 ABCA3Q99758 1704 aa16.79■□□□□ 0.28
CDH8-208ENST00000582980 AATKQ6ZMQ8 1374 aa16.78■□□□□ 0.28
CDH8-208ENST00000582980 HSPA1LP34931 641 aa16.78■□□□□ 0.28
CDH8-208ENST00000582980 MYBBP1AQ9BQG0 1328 aaKnown RBP16.77■□□□□ 0.28
CDH8-208ENST00000582980 TNNT2P45379 298 aaPredicted RBP16.77■□□□□ 0.28
CDH8-208ENST00000582980 HAP1P54257 671 aaPredicted RBP16.77■□□□□ 0.28
CDH8-208ENST00000582980 NFAT5O94916 1531 aa16.76■□□□□ 0.27
CDH8-208ENST00000582980 SOX12O15370 315 aa16.76■□□□□ 0.27
CDH8-208ENST00000582980 PLEKHG5O94827 1062 aa16.76■□□□□ 0.27
CDH8-208ENST00000582980 GCP02774 474 aa16.76■□□□□ 0.27
CDH8-208ENST00000582980 PPP2R1AP30153 589 aa16.74■□□□□ 0.27
CDH8-208ENST00000582980 CABLES1Q8TDN4 633 aa16.74■□□□□ 0.27
CDH8-208ENST00000582980 MAP2P11137 1827 aaKnown RBP16.74■□□□□ 0.27
CDH8-208ENST00000582980 LTN1O94822 1766 aa16.74■□□□□ 0.27
CDH8-208ENST00000582980 SPATA31A6Q5VVP1 1343 aa16.72■□□□□ 0.27
CDH8-208ENST00000582980 SMG6Q86US8 1419 aaKnown RBP16.72■□□□□ 0.27
CDH8-208ENST00000582980 KIF24Q5T7B8 1368 aa16.72■□□□□ 0.27
CDH8-208ENST00000582980 RRS1Q15050 365 aaKnown RBP16.71■□□□□ 0.27
CDH8-208ENST00000582980 CPDO75976 1380 aa16.71■□□□□ 0.27
CDH8-208ENST00000582980 MAP3K19Q56UN5 1328 aa16.7■□□□□ 0.26
CDH8-208ENST00000582980 CDK12Q9NYV4 1490 aaPredicted RBP16.7■□□□□ 0.26
CDH8-208ENST00000582980 RTL1A6NKG5 1358 aa16.7■□□□□ 0.26
CDH8-208ENST00000582980 POLKQ9UBT6 870 aa16.7■□□□□ 0.26
CDH8-208ENST00000582980 ABCC6O95255 1503 aa16.7■□□□□ 0.26
CDH8-208ENST00000582980 FBLN1P23142 703 aa16.69■□□□□ 0.26
CDH8-208ENST00000582980 AMPHP49418 695 aa16.69■□□□□ 0.26
CDH8-208ENST00000582980 MTHFSP49914 203 aa16.69■□□□□ 0.26
CDH8-208ENST00000582980 ZC3H6P61129 1189 aaKnown RBP16.69■□□□□ 0.26
CDH8-208ENST00000582980 ARHGEF25Q86VW2 580 aa16.69■□□□□ 0.26
CDH8-208ENST00000582980 MIER1Q8N108 512 aa16.69■□□□□ 0.26
CDH8-208ENST00000582980 CFAP53Q96M91 514 aa16.69■□□□□ 0.26
CDH8-208ENST00000582980 FLT4P35916 1363 aa16.68■□□□□ 0.26
CDH8-208ENST00000582980 KIAA0232Q92628 1395 aa16.68■□□□□ 0.26
CDH8-208ENST00000582980 ZBTB7CA1YPR0 619 aa16.68■□□□□ 0.26
CDH8-208ENST00000582980 PPM1GO15355 546 aaPredicted RBP16.68■□□□□ 0.26
CDH8-208ENST00000582980 PRDM11Q9NQV5 511 aa16.68■□□□□ 0.26
CDH8-208ENST00000582980 EMILIN1Q9Y6C2 1016 aa16.68■□□□□ 0.26
CDH8-208ENST00000582980 NUTM2BA6NNL0 878 aaPredicted RBP16.67■□□□□ 0.26
CDH8-208ENST00000582980 NUTM2EB1AL46 878 aaPredicted RBP16.67■□□□□ 0.26
CDH8-208ENST00000582980 CCER2I3L3R5 266 aa16.67■□□□□ 0.26
CDH8-208ENST00000582980 NUTM2AQ8IVF1 878 aaPredicted RBP16.67■□□□□ 0.26
CDH8-208ENST00000582980 PEAK1Q9H792 1746 aa16.67■□□□□ 0.26
CDH8-208ENST00000582980 BLMP54132 1417 aaPredicted RBP16.66■□□□□ 0.26
CDH8-208ENST00000582980 COL14A1Q05707 1796 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms