RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 CCDC61Q9Y6R9 512 aa22.64■■□□□ 1.22
ERBB2-212ENST00000582788 KIF20BQ96Q89 1820 aa22.64■■□□□ 1.21
ERBB2-212ENST00000582788 XRN1Q8IZH2 1706 aaKnown RBP22.63■■□□□ 1.21
ERBB2-212ENST00000582788 CDC42BPGQ6DT37 1551 aa22.62■■□□□ 1.21
ERBB2-212ENST00000582788 MS4A1P11836 297 aa22.62■■□□□ 1.21
ERBB2-212ENST00000582788 DEKP35659 375 aaKnown RBP22.62■■□□□ 1.21
ERBB2-212ENST00000582788 ANKLE2Q86XL3 938 aa22.62■■□□□ 1.21
ERBB2-212ENST00000582788 CCDC146Q8IYE0 955 aa22.61■■□□□ 1.21
ERBB2-212ENST00000582788 ZBTB47Q9UFB7 747 aaPredicted RBP22.61■■□□□ 1.21
ERBB2-212ENST00000582788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.6■■□□□ 1.21
ERBB2-212ENST00000582788 EDC4Q6P2E9 1401 aaKnown RBP22.59■■□□□ 1.21
ERBB2-212ENST00000582788 NBR1Q14596 966 aa22.58■■□□□ 1.21
ERBB2-212ENST00000582788 PIK3R4Q99570 1358 aa22.58■■□□□ 1.21
ERBB2-212ENST00000582788 MON2Q7Z3U7 1717 aa22.58■■□□□ 1.21
ERBB2-212ENST00000582788 PDE4AP27815 886 aa22.58■■□□□ 1.2
ERBB2-212ENST00000582788 CFAP53Q96M91 514 aa22.58■■□□□ 1.2
ERBB2-212ENST00000582788 TOPAZ1Q8N9V7 1692 aa22.58■■□□□ 1.2
ERBB2-212ENST00000582788 AKAP12Q02952 1782 aa22.58■■□□□ 1.2
ERBB2-212ENST00000582788 STRCQ7RTU9 1775 aa22.57■■□□□ 1.2
ERBB2-212ENST00000582788 PLIN1O60240 522 aa22.57■■□□□ 1.2
ERBB2-212ENST00000582788 KCNA6P17658 529 aa22.57■■□□□ 1.2
ERBB2-212ENST00000582788 BACH2Q9BYV9 841 aa22.57■■□□□ 1.2
ERBB2-212ENST00000582788 ITSN1Q15811 1721 aa22.56■■□□□ 1.2
ERBB2-212ENST00000582788 NUTM2FA1L443 756 aa22.55■■□□□ 1.2
ERBB2-212ENST00000582788 CRBNQ96SW2 442 aa22.55■■□□□ 1.2
ERBB2-212ENST00000582788 ZNF521Q96K83 1311 aa22.54■■□□□ 1.2
ERBB2-212ENST00000582788 APAF1O14727 1248 aa22.54■■□□□ 1.2
ERBB2-212ENST00000582788 ZNF692Q9BU19 519 aaPredicted RBP22.52■■□□□ 1.2
ERBB2-212ENST00000582788 NKTRP30414 1462 aaKnown RBP22.52■■□□□ 1.2
ERBB2-212ENST00000582788 CHD2O14647 1828 aaKnown RBP22.52■■□□□ 1.2
ERBB2-212ENST00000582788 COL3A1P02461 1466 aaPredicted RBP22.52■■□□□ 1.19
ERBB2-212ENST00000582788 NME9Q86XW9 330 aa22.52■■□□□ 1.19
ERBB2-212ENST00000582788 PLEKHG3A1L390 1219 aa22.51■■□□□ 1.19
ERBB2-212ENST00000582788 ACEP12821 1306 aa22.5■■□□□ 1.19
ERBB2-212ENST00000582788 ZRANB1Q9UGI0 708 aa22.49■■□□□ 1.19
ERBB2-212ENST00000582788 FBLN1P23142 703 aa22.48■■□□□ 1.19
ERBB2-212ENST00000582788 NRKQ7Z2Y5 1582 aa22.48■■□□□ 1.19
ERBB2-212ENST00000582788 NPHP4O75161 1426 aaPredicted RBP22.48■■□□□ 1.19
ERBB2-212ENST00000582788 DUSP27Q5VZP5 1158 aa22.48■■□□□ 1.19
ERBB2-212ENST00000582788 NPM2Q86SE8 214 aaKnown RBP22.48■■□□□ 1.19
ERBB2-212ENST00000582788 PNPLA6Q8IY17 1366 aa22.47■■□□□ 1.19
ERBB2-212ENST00000582788 RUNDC1Q96C34 613 aa22.47■■□□□ 1.19
ERBB2-212ENST00000582788 C20orf194Q5TEA3 1177 aa22.47■■□□□ 1.19
ERBB2-212ENST00000582788 RGPD8O14715 1765 aaPredicted RBP22.46■■□□□ 1.19
ERBB2-212ENST00000582788 GOLGA2Q08379 1002 aa22.46■■□□□ 1.19
ERBB2-212ENST00000582788 KDM2BQ8NHM5 1336 aa22.45■■□□□ 1.18
ERBB2-212ENST00000582788 POLKQ9UBT6 870 aa22.45■■□□□ 1.18
ERBB2-212ENST00000582788 IQSEC2Q5JU85 1478 aa22.45■■□□□ 1.18
ERBB2-212ENST00000582788 U2AF1L5P0DN76 240 aaPredicted RBP22.45■■□□□ 1.18
ERBB2-212ENST00000582788 U2AF1Q01081 240 aaKnown RBP eCLIP22.45■■□□□ 1.18
ERBB2-212ENST00000582788 USP6P35125 1406 aa22.44■■□□□ 1.18
ERBB2-212ENST00000582788 MAP2P11137 1827 aaKnown RBP22.44■■□□□ 1.18
ERBB2-212ENST00000582788 NGEFQ8N5V2 710 aa22.44■■□□□ 1.18
ERBB2-212ENST00000582788 TTC21BQ7Z4L5 1316 aa22.44■■□□□ 1.18
ERBB2-212ENST00000582788 COG3Q96JB2 828 aa22.43■■□□□ 1.18
ERBB2-212ENST00000582788 RTL5Q5HYW3 569 aaPredicted RBP22.43■■□□□ 1.18
ERBB2-212ENST00000582788 PMFBP1Q8TBY8 1022 aa22.43■■□□□ 1.18
ERBB2-212ENST00000582788 FMN2Q9NZ56 1722 aa22.42■■□□□ 1.18
ERBB2-212ENST00000582788 NALCNQ8IZF0 1738 aa22.42■■□□□ 1.18
ERBB2-212ENST00000582788 TCP11L2Q8N4U5 519 aa22.41■■□□□ 1.18
ERBB2-212ENST00000582788 AATKQ6ZMQ8 1374 aa22.41■■□□□ 1.18
ERBB2-212ENST00000582788 U2SURPO15042 1029 aaKnown RBP22.41■■□□□ 1.18
ERBB2-212ENST00000582788 SLFN5Q08AF3 891 aa22.41■■□□□ 1.18
ERBB2-212ENST00000582788 SSH2Q76I76 1423 aa22.4■■□□□ 1.18
ERBB2-212ENST00000582788 ANKARQ7Z5J8 1434 aa22.4■■□□□ 1.18
ERBB2-212ENST00000582788 DIAPH1O60610 1272 aaKnown RBP22.4■■□□□ 1.18
ERBB2-212ENST00000582788 SKAP1Q86WV1 359 aa22.4■■□□□ 1.18
ERBB2-212ENST00000582788 SPINK5Q9NQ38 1064 aaPredicted RBP22.4■■□□□ 1.18
ERBB2-212ENST00000582788 DMRT2Q9Y5R5 561 aa22.4■■□□□ 1.18
ERBB2-212ENST00000582788 EMILIN1Q9Y6C2 1016 aa22.4■■□□□ 1.18
ERBB2-212ENST00000582788 PPM1GO15355 546 aaPredicted RBP22.39■■□□□ 1.17
ERBB2-212ENST00000582788 TRMT2AQ8IZ69 625 aaKnown RBP22.39■■□□□ 1.17
ERBB2-212ENST00000582788 RBM33Q96EV2 1170 aaKnown RBP22.39■■□□□ 1.17
ERBB2-212ENST00000582788 RRP7AQ9Y3A4 280 aaKnown RBP22.39■■□□□ 1.17
ERBB2-212ENST00000582788 WWC1Q8IX03 1113 aa22.38■■□□□ 1.17
ERBB2-212ENST00000582788 NEUROD2Q15784 382 aa22.38■■□□□ 1.17
ERBB2-212ENST00000582788 CENPQQ7L2Z9 268 aaPredicted RBP22.38■■□□□ 1.17
ERBB2-212ENST00000582788 OVOS2A0A0J9YW53 1432 aa22.37■■□□□ 1.17
ERBB2-212ENST00000582788 OVOS2Q6IE36 1432 aa22.37■■□□□ 1.17
ERBB2-212ENST00000582788 PLEKHF1Q96S99 279 aa22.37■■□□□ 1.17
ERBB2-212ENST00000582788 NGDNQ8NEJ9 315 aaKnown RBP22.36■■□□□ 1.17
ERBB2-212ENST00000582788 PHF23Q9BUL5 403 aaPredicted RBP22.36■■□□□ 1.17
ERBB2-212ENST00000582788 CDK12Q9NYV4 1490 aaPredicted RBP22.35■■□□□ 1.17
ERBB2-212ENST00000582788 RRS1Q15050 365 aaKnown RBP22.35■■□□□ 1.17
ERBB2-212ENST00000582788 E9PSI1 815 aa22.34■■□□□ 1.17
ERBB2-212ENST00000582788 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.34■■□□□ 1.17
ERBB2-212ENST00000582788 NWD1Q149M9 1564 aa22.34■■□□□ 1.17
ERBB2-212ENST00000582788 ADGRL3Q9HAR2 1447 aa22.33■■□□□ 1.17
ERBB2-212ENST00000582788 TTC21AQ8NDW8 1320 aa22.33■■□□□ 1.16
ERBB2-212ENST00000582788 CCDC27Q2M243 656 aa22.32■■□□□ 1.16
ERBB2-212ENST00000582788 DDRGK1Q96HY6 314 aa22.32■■□□□ 1.16
ERBB2-212ENST00000582788 NCBP3Q53F19 620 aaKnown RBP22.31■■□□□ 1.16
ERBB2-212ENST00000582788 USP31Q70CQ4 1352 aa22.3■■□□□ 1.16
ERBB2-212ENST00000582788 IL13P35225 146 aa22.3■■□□□ 1.16
ERBB2-212ENST00000582788 USP35Q9P2H5 1018 aa22.3■■□□□ 1.16
ERBB2-212ENST00000582788 LAS1LQ9Y4W2 734 aaKnown RBP22.3■■□□□ 1.16
ERBB2-212ENST00000582788 LRRC7Q96NW7 1537 aa22.29■■□□□ 1.16
ERBB2-212ENST00000582788 PIK3C2AO00443 1686 aa22.28■■□□□ 1.16
ERBB2-212ENST00000582788 FCHSD2O94868 740 aa22.28■■□□□ 1.16
ERBB2-212ENST00000582788 WDR63Q8IWG1 891 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms