RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 ADGRB3O60242 1522 aa19.41■□□□□ 0.7
TRAPPC8-210ENST00000582513 IGSF3O75054 1194 aa19.41■□□□□ 0.7
TRAPPC8-210ENST00000582513 SBNO2Q9Y2G9 1366 aa19.41■□□□□ 0.7
TRAPPC8-210ENST00000582513 SAMD1Q6SPF0 538 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC8-210ENST00000582513 RIPK4P57078 832 aa19.39■□□□□ 0.69
TRAPPC8-210ENST00000582513 IRX3P78415 501 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC8-210ENST00000582513 NEURL4Q96JN8 1562 aa19.39■□□□□ 0.69
TRAPPC8-210ENST00000582513 U2AF1L5P0DN76 240 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC8-210ENST00000582513 U2AF1Q01081 240 aaKnown RBP eCLIP19.39■□□□□ 0.694e-6■□□□□ 8.3
TRAPPC8-210ENST00000582513 DMTNQ08495 405 aa19.38■□□□□ 0.69
TRAPPC8-210ENST00000582513 CGNL1Q0VF96 1302 aa19.38■□□□□ 0.69
TRAPPC8-210ENST00000582513 CBX1P83916 185 aa19.38■□□□□ 0.69
TRAPPC8-210ENST00000582513 RLBP1P12271 317 aa19.38■□□□□ 0.69
TRAPPC8-210ENST00000582513 TEX2Q8IWB9 1127 aa19.37■□□□□ 0.69
TRAPPC8-210ENST00000582513 RARSP54136 660 aaKnown RBP19.37■□□□□ 0.69
TRAPPC8-210ENST00000582513 MSNP26038 577 aaKnown RBP19.36■□□□□ 0.69
TRAPPC8-210ENST00000582513 PDE3AQ14432 1141 aa19.36■□□□□ 0.69
TRAPPC8-210ENST00000582513 QRICH2Q9H0J4 1663 aa19.36■□□□□ 0.69
TRAPPC8-210ENST00000582513 FRMPD1Q5SYB0 1578 aa19.36■□□□□ 0.69
TRAPPC8-210ENST00000582513 POGZQ7Z3K3 1410 aa19.36■□□□□ 0.69
TRAPPC8-210ENST00000582513 ADGRB1O14514 1584 aa19.35■□□□□ 0.69
TRAPPC8-210ENST00000582513 LMTK2Q8IWU2 1503 aa19.35■□□□□ 0.69
TRAPPC8-210ENST00000582513 CNPY4Q8N129 248 aa19.35■□□□□ 0.69
TRAPPC8-210ENST00000582513 CFAP53Q96M91 514 aa19.35■□□□□ 0.69
TRAPPC8-210ENST00000582513 MYO3AQ8NEV4 1616 aa19.35■□□□□ 0.69
TRAPPC8-210ENST00000582513 EVC2Q86UK5 1308 aa19.34■□□□□ 0.69
TRAPPC8-210ENST00000582513 UQCRHLA0A096LP55 91 aa19.34■□□□□ 0.69
TRAPPC8-210ENST00000582513 UQCRHP07919 91 aa19.34■□□□□ 0.69
TRAPPC8-210ENST00000582513 ZBTB9Q96C00 473 aa19.34■□□□□ 0.69
TRAPPC8-210ENST00000582513 SEC24BO95487 1268 aa19.34■□□□□ 0.69
TRAPPC8-210ENST00000582513 APPP05067 770 aa19.34■□□□□ 0.69
TRAPPC8-210ENST00000582513 NGEFQ8N5V2 710 aa19.34■□□□□ 0.69
TRAPPC8-210ENST00000582513 TULP1O00294 542 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC8-210ENST00000582513 SRPK2P78362 688 aaKnown RBP19.34■□□□□ 0.69
TRAPPC8-210ENST00000582513 IDI1Q13907 227 aa19.34■□□□□ 0.69
TRAPPC8-210ENST00000582513 GGNBP2Q9H3C7 697 aa19.34■□□□□ 0.69
TRAPPC8-210ENST00000582513 U2SURPO15042 1029 aaKnown RBP19.33■□□□□ 0.69
TRAPPC8-210ENST00000582513 PPLO60437 1756 aa19.33■□□□□ 0.68
TRAPPC8-210ENST00000582513 SHPRHQ149N8 1683 aa19.33■□□□□ 0.68
TRAPPC8-210ENST00000582513 PCDHB15Q9Y5E8 787 aa19.32■□□□□ 0.68
TRAPPC8-210ENST00000582513 SETBP1Q9Y6X0 1596 aa19.32■□□□□ 0.68
TRAPPC8-210ENST00000582513 VGFO15240 615 aaPredicted RBP19.32■□□□□ 0.68
TRAPPC8-210ENST00000582513 TSR2Q969E8 191 aaKnown RBP19.32■□□□□ 0.68
TRAPPC8-210ENST00000582513 MRE11P49959 708 aa19.31■□□□□ 0.68
TRAPPC8-210ENST00000582513 RPGRIP1LQ68CZ1 1315 aa19.3■□□□□ 0.68
TRAPPC8-210ENST00000582513 MINK1Q8N4C8 1332 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC8-210ENST00000582513 ABCC3O15438 1527 aa19.3■□□□□ 0.68
TRAPPC8-210ENST00000582513 OSCARQ8IYS5 282 aa19.29■□□□□ 0.68
TRAPPC8-210ENST00000582513 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC8-210ENST00000582513 GRPEL1Q9HAV7 217 aa19.29■□□□□ 0.68
TRAPPC8-210ENST00000582513 MLH3Q9UHC1 1453 aa19.28■□□□□ 0.68
TRAPPC8-210ENST00000582513 WDR63Q8IWG1 891 aa19.28■□□□□ 0.68
TRAPPC8-210ENST00000582513 PHF23Q9BUL5 403 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC8-210ENST00000582513 CHMP4CQ96CF2 233 aa19.28■□□□□ 0.68
TRAPPC8-210ENST00000582513 TULP4Q9NRJ4 1543 aa19.27■□□□□ 0.68
TRAPPC8-210ENST00000582513 GLI2P10070 1586 aa19.27■□□□□ 0.68
TRAPPC8-210ENST00000582513 PATL2C9JE40 543 aaKnown RBP19.27■□□□□ 0.68
TRAPPC8-210ENST00000582513 ZSCAN20P17040 1043 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC8-210ENST00000582513 UTP14CQ5TAP6 766 aaKnown RBP19.27■□□□□ 0.68
TRAPPC8-210ENST00000582513 ZC3H13Q5T200 1668 aaKnown RBP19.27■□□□□ 0.68
TRAPPC8-210ENST00000582513 ANKRD36BQ8N2N9 1353 aa19.27■□□□□ 0.68
TRAPPC8-210ENST00000582513 IQSEC2Q5JU85 1478 aa19.27■□□□□ 0.67
TRAPPC8-210ENST00000582513 HECW2Q9P2P5 1572 aa19.27■□□□□ 0.67
TRAPPC8-210ENST00000582513 SIGLEC1Q9BZZ2 1709 aa19.27■□□□□ 0.67
TRAPPC8-210ENST00000582513 USP19O94966 1318 aa19.26■□□□□ 0.67
TRAPPC8-210ENST00000582513 A0A1W2PP64 1363 aa19.25■□□□□ 0.67
TRAPPC8-210ENST00000582513 ZNF771Q7L3S4 317 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC8-210ENST00000582513 PRAM1Q96QH2 718 aa19.24■□□□□ 0.67
TRAPPC8-210ENST00000582513 FBLN1P23142 703 aa19.24■□□□□ 0.67
TRAPPC8-210ENST00000582513 PDZRN3Q9UPQ7 1066 aa19.24■□□□□ 0.67
TRAPPC8-210ENST00000582513 FBXO31Q5XUX0 539 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC8-210ENST00000582513 EXOSC9Q06265 439 aaKnown RBP19.23■□□□□ 0.67
TRAPPC8-210ENST00000582513 BECN1Q14457 450 aa19.23■□□□□ 0.67
TRAPPC8-210ENST00000582513 PLPPR3Q6T4P5 718 aa19.23■□□□□ 0.67
TRAPPC8-210ENST00000582513 MAPK8IP3Q9UPT6 1336 aa19.22■□□□□ 0.67
TRAPPC8-210ENST00000582513 NINLQ9Y2I6 1382 aa19.22■□□□□ 0.67
TRAPPC8-210ENST00000582513 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC8-210ENST00000582513 KCNJ4P48050 445 aa19.22■□□□□ 0.67
TRAPPC8-210ENST00000582513 RGS22Q8NE09 1264 aa19.22■□□□□ 0.67
TRAPPC8-210ENST00000582513 KIF20AO95235 890 aa19.21■□□□□ 0.67
TRAPPC8-210ENST00000582513 PMFBP1Q8TBY8 1022 aa19.21■□□□□ 0.67
TRAPPC8-210ENST00000582513 CAMSAP1Q5T5Y3 1602 aa19.21■□□□□ 0.67
TRAPPC8-210ENST00000582513 NEXMIFQ5QGS0 1516 aa19.21■□□□□ 0.67
TRAPPC8-210ENST00000582513 CCDC27Q2M243 656 aa19.21■□□□□ 0.67
TRAPPC8-210ENST00000582513 SMC4Q9NTJ3 1288 aa19.21■□□□□ 0.67
TRAPPC8-210ENST00000582513 MTERF4Q7Z6M4 381 aaKnown RBP19.2■□□□□ 0.66
TRAPPC8-210ENST00000582513 ARHGEF28Q8N1W1 1705 aaKnown RBP19.2■□□□□ 0.66
TRAPPC8-210ENST00000582513 FYB1O15117 783 aa19.2■□□□□ 0.66
TRAPPC8-210ENST00000582513 TMPOP42166 694 aaKnown RBP19.2■□□□□ 0.66
TRAPPC8-210ENST00000582513 YEATS2Q9ULM3 1422 aa19.2■□□□□ 0.66
TRAPPC8-210ENST00000582513 OFD1O75665 1012 aa19.19■□□□□ 0.66
TRAPPC8-210ENST00000582513 XPCQ01831 940 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC8-210ENST00000582513 TRAK2O60296 914 aa19.19■□□□□ 0.66
TRAPPC8-210ENST00000582513 ZKSCAN2Q63HK3 967 aa19.19■□□□□ 0.66
TRAPPC8-210ENST00000582513 CCDC94Q9BW85 323 aaPredicted RBP19.18■□□□□ 0.66
TRAPPC8-210ENST00000582513 KCNG1Q9UIX4 513 aa19.18■□□□□ 0.66
TRAPPC8-210ENST00000582513 MVPQ14764 893 aaKnown RBP19.18■□□□□ 0.66
TRAPPC8-210ENST00000582513 DZIP1LQ8IYY4 767 aaKnown RBP19.18■□□□□ 0.66
TRAPPC8-210ENST00000582513 TRIM35Q9UPQ4 493 aa19.18■□□□□ 0.66
TRAPPC8-210ENST00000582513 SPDYE4A6NLX3 237 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms