RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-225ENST00000582482 TRIM35Q9UPQ4 493 aa13.86□□□□□ -0.19
CDK5RAP3-225ENST00000582482 PCDHB15Q9Y5E8 787 aa13.86□□□□□ -0.19
CDK5RAP3-225ENST00000582482 RRS1Q15050 365 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-225ENST00000582482 CENPQQ7L2Z9 268 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-225ENST00000582482 PLEKHF1Q96S99 279 aa13.85□□□□□ -0.19
CDK5RAP3-225ENST00000582482 NLRP1Q9C000 1473 aa13.85□□□□□ -0.19
CDK5RAP3-225ENST00000582482 C8orf34Q49A92 452 aa13.85□□□□□ -0.19
CDK5RAP3-225ENST00000582482 SEC24BO95487 1268 aa13.84□□□□□ -0.19
CDK5RAP3-225ENST00000582482 TMPOP42166 694 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-225ENST00000582482 PHACTR3Q96KR7 559 aa13.84□□□□□ -0.19
CDK5RAP3-225ENST00000582482 ARHGEF40Q8TER5 1519 aa13.83□□□□□ -0.19
CDK5RAP3-225ENST00000582482 TERF2IPQ9NYB0 399 aa13.83□□□□□ -0.2
CDK5RAP3-225ENST00000582482 ELL2O00472 640 aaPredicted RBP13.83□□□□□ -0.2
CDK5RAP3-225ENST00000582482 RIPK4P57078 832 aa13.83□□□□□ -0.2
CDK5RAP3-225ENST00000582482 HDGFL2Q7Z4V5 671 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP3-225ENST00000582482 USP32Q8NFA0 1604 aa13.82□□□□□ -0.2
CDK5RAP3-225ENST00000582482 ZFYVE9O95405 1425 aa13.82□□□□□ -0.2
CDK5RAP3-225ENST00000582482 COL3A1P02461 1466 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP3-225ENST00000582482 SLC26A8Q96RN1 970 aa13.82□□□□□ -0.2
CDK5RAP3-225ENST00000582482 BCL11AQ9H165 835 aa13.82□□□□□ -0.2
CDK5RAP3-225ENST00000582482 POLKQ9UBT6 870 aa13.82□□□□□ -0.2
CDK5RAP3-225ENST00000582482 PRKAR2BP31323 418 aa13.81□□□□□ -0.2
CDK5RAP3-225ENST00000582482 ZMYM3Q14202 1370 aa13.81□□□□□ -0.2
CDK5RAP3-225ENST00000582482 MS4A1P11836 297 aa13.81□□□□□ -0.2
CDK5RAP3-225ENST00000582482 ESF1Q9H501 851 aaKnown RBP13.81□□□□□ -0.2
CDK5RAP3-225ENST00000582482 DIAPH1O60610 1272 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-225ENST00000582482 MAPK8IP3Q9UPT6 1336 aa13.8□□□□□ -0.2
CDK5RAP3-225ENST00000582482 FAM83GA6ND36 823 aa13.8□□□□□ -0.2
CDK5RAP3-225ENST00000582482 DCTN1Q14203 1278 aa13.8□□□□□ -0.2
CDK5RAP3-225ENST00000582482 SSH1Q8WYL5 1049 aa13.8□□□□□ -0.2
CDK5RAP3-225ENST00000582482 ATAD2Q6PL18 1390 aa13.8□□□□□ -0.2
CDK5RAP3-225ENST00000582482 SMC4Q9NTJ3 1288 aa13.79□□□□□ -0.2
CDK5RAP3-225ENST00000582482 PRR36Q9H6K5 1346 aa13.79□□□□□ -0.2
CDK5RAP3-225ENST00000582482 KIF13AQ9H1H9 1805 aa13.78□□□□□ -0.2
CDK5RAP3-225ENST00000582482 NRXN3Q9Y4C0 1643 aa13.78□□□□□ -0.2
CDK5RAP3-225ENST00000582482 LTKP29376 864 aa13.78□□□□□ -0.2
CDK5RAP3-225ENST00000582482 WDR63Q8IWG1 891 aa13.78□□□□□ -0.2
CDK5RAP3-225ENST00000582482 PPIP5K1Q6PFW1 1433 aa13.78□□□□□ -0.2
CDK5RAP3-225ENST00000582482 CPS1P31327 1500 aa13.77□□□□□ -0.2
CDK5RAP3-225ENST00000582482 SETD1AO15047 1707 aaKnown RBP13.77□□□□□ -0.2
CDK5RAP3-225ENST00000582482 WASLO00401 505 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-225ENST00000582482 NUDT16Q96DE0 195 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-225ENST00000582482 RBM33Q96EV2 1170 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-225ENST00000582482 DEKP35659 375 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-225ENST00000582482 TSPYL6Q8N831 410 aa13.76□□□□□ -0.21
CDK5RAP3-225ENST00000582482 NOB1Q9ULX3 412 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-225ENST00000582482 TRIM27P14373 513 aa13.76□□□□□ -0.21
CDK5RAP3-225ENST00000582482 FAM161AQ3B820 660 aa13.76□□□□□ -0.21
CDK5RAP3-225ENST00000582482 NSD2O96028 1365 aa13.76□□□□□ -0.21
CDK5RAP3-225ENST00000582482 LRRC7Q96NW7 1537 aa13.76□□□□□ -0.21
CDK5RAP3-225ENST00000582482 MAP2P11137 1827 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-225ENST00000582482 PDE3AQ14432 1141 aa13.75□□□□□ -0.21
CDK5RAP3-225ENST00000582482 AEBP1Q8IUX7 1158 aa13.75□□□□□ -0.21
CDK5RAP3-225ENST00000582482 SPATA31D1Q6ZQQ2 1576 aa13.75□□□□□ -0.21
CDK5RAP3-225ENST00000582482 ROBO2Q9HCK4 1378 aa13.75□□□□□ -0.21
CDK5RAP3-225ENST00000582482 ADGRB2O60241 1585 aa13.75□□□□□ -0.21
CDK5RAP3-225ENST00000582482 ITPRIPQ8IWB1 547 aa13.75□□□□□ -0.21
CDK5RAP3-225ENST00000582482 RSPH6AQ9H0K4 717 aa13.75□□□□□ -0.21
CDK5RAP3-225ENST00000582482 MYH16Q9H6N6 1097 aa13.75□□□□□ -0.21
CDK5RAP3-225ENST00000582482 KIF20BQ96Q89 1820 aa13.74□□□□□ -0.21
CDK5RAP3-225ENST00000582482 FTSJ3Q8IY81 847 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP3-225ENST00000582482 C1orf115Q9H7X2 142 aa13.74□□□□□ -0.21
CDK5RAP3-225ENST00000582482 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
CDK5RAP3-225ENST00000582482 KRT24Q2M2I5 525 aa13.74□□□□□ -0.21
CDK5RAP3-225ENST00000582482 PMFBP1Q8TBY8 1022 aa13.74□□□□□ -0.21
CDK5RAP3-225ENST00000582482 PUS7Q96PZ0 661 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP3-225ENST00000582482 PDZRN3Q9UPQ7 1066 aa13.74□□□□□ -0.21
CDK5RAP3-225ENST00000582482 CCDC27Q2M243 656 aa13.73□□□□□ -0.21
CDK5RAP3-225ENST00000582482 TMEM57Q8N5G2 664 aa13.73□□□□□ -0.21
CDK5RAP3-225ENST00000582482 DZIP1LQ8IYY4 767 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-225ENST00000582482 ANKRD26Q9UPS8 1709 aa13.72□□□□□ -0.21
CDK5RAP3-225ENST00000582482 NEFMP07197 916 aa13.71□□□□□ -0.21
CDK5RAP3-225ENST00000582482 MVPQ14764 893 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-225ENST00000582482 NUTM2GQ5VZR2 741 aa13.71□□□□□ -0.21
CDK5RAP3-225ENST00000582482 TNRQ92752 1358 aa13.71□□□□□ -0.21
CDK5RAP3-225ENST00000582482 AGLP35573 1532 aa13.71□□□□□ -0.21
CDK5RAP3-225ENST00000582482 ZKSCAN2Q63HK3 967 aa13.71□□□□□ -0.21
CDK5RAP3-225ENST00000582482 USP19O94966 1318 aa13.71□□□□□ -0.22
CDK5RAP3-225ENST00000582482 IL13P35225 146 aa13.7□□□□□ -0.22
CDK5RAP3-225ENST00000582482 MED14O60244 1454 aa13.7□□□□□ -0.22
CDK5RAP3-225ENST00000582482 PNPLA6Q8IY17 1366 aa13.69□□□□□ -0.22
CDK5RAP3-225ENST00000582482 NINLQ9Y2I6 1382 aa13.69□□□□□ -0.22
CDK5RAP3-225ENST00000582482 MAPK8IP2Q13387 824 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-225ENST00000582482 NGEFQ8N5V2 710 aa13.68□□□□□ -0.22
CDK5RAP3-225ENST00000582482 COG3Q96JB2 828 aa13.68□□□□□ -0.22
CDK5RAP3-225ENST00000582482 MIS18AQ9NYP9 233 aa13.68□□□□□ -0.22
CDK5RAP3-225ENST00000582482 HSP90AB2PQ58FF8 381 aa13.67□□□□□ -0.22
CDK5RAP3-225ENST00000582482 SPRYD3Q8NCJ5 442 aa13.67□□□□□ -0.22
CDK5RAP3-225ENST00000582482 CCDC61Q9Y6R9 512 aa13.67□□□□□ -0.22
CDK5RAP3-225ENST00000582482 ACEP12821 1306 aa13.67□□□□□ -0.22
CDK5RAP3-225ENST00000582482 CPSF1Q10570 1443 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-225ENST00000582482 ATF7IPQ6VMQ6 1270 aa13.67□□□□□ -0.22
CDK5RAP3-225ENST00000582482 MCM10Q7L590 875 aa13.67□□□□□ -0.22
CDK5RAP3-225ENST00000582482 C8orf58Q8NAV2 365 aa13.67□□□□□ -0.22
CDK5RAP3-225ENST00000582482 MBIPQ9NS73 344 aa13.67□□□□□ -0.22
CDK5RAP3-225ENST00000582482 TMEM2Q9UHN6 1383 aa13.67□□□□□ -0.22
CDK5RAP3-225ENST00000582482 FAM135BQ49AJ0 1406 aa13.67□□□□□ -0.22
CDK5RAP3-225ENST00000582482 PTPRUQ92729 1446 aa13.67□□□□□ -0.22
CDK5RAP3-225ENST00000582482 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms