RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CDCA7LQ96GN5 454 aa29.86■■■□□ 2.37
CCDC47-204ENST00000582252 CABP1Q9NZU7 370 aa29.86■■■□□ 2.37
CCDC47-204ENST00000582252 PRR36Q9H6K5 1346 aa29.86■■■□□ 2.37
CCDC47-204ENST00000582252 ZNF521Q96K83 1311 aa29.85■■■□□ 2.37
CCDC47-204ENST00000582252 MTHFSP49914 203 aa29.85■■■□□ 2.37
CCDC47-204ENST00000582252 RRP1P56182 461 aaKnown RBP29.85■■■□□ 2.37
CCDC47-204ENST00000582252 C14orf37Q86TY3 774 aa29.85■■■□□ 2.37
CCDC47-204ENST00000582252 AKAP12Q02952 1782 aa29.84■■■□□ 2.37
CCDC47-204ENST00000582252 GOLGA2Q08379 1002 aa29.84■■■□□ 2.37
CCDC47-204ENST00000582252 RBM33Q96EV2 1170 aaKnown RBP29.83■■■□□ 2.37
CCDC47-204ENST00000582252 CCDC146Q8IYE0 955 aa29.82■■■□□ 2.36
CCDC47-204ENST00000582252 MON2Q7Z3U7 1717 aa29.81■■■□□ 2.36
CCDC47-204ENST00000582252 TMEM94Q12767 1356 aa29.81■■■□□ 2.36
CCDC47-204ENST00000582252 XIRP1Q702N8 1843 aaKnown RBP29.81■■■□□ 2.36
CCDC47-204ENST00000582252 APAF1O14727 1248 aa29.79■■■□□ 2.36
CCDC47-204ENST00000582252 FYB1O15117 783 aa29.79■■■□□ 2.36
CCDC47-204ENST00000582252 CPSF1Q10570 1443 aaKnown RBP29.79■■■□□ 2.36
CCDC47-204ENST00000582252 NUTM2FA1L443 756 aa29.78■■■□□ 2.36
CCDC47-204ENST00000582252 ZNF335Q9H4Z2 1342 aaPredicted RBP29.78■■■□□ 2.36
CCDC47-204ENST00000582252 GGNBP2Q9H3C7 697 aa29.77■■■□□ 2.36
CCDC47-204ENST00000582252 DCCP43146 1447 aa29.77■■■□□ 2.36
CCDC47-204ENST00000582252 PLEKHG3A1L390 1219 aa29.76■■■□□ 2.36
CCDC47-204ENST00000582252 RUNDC1Q96C34 613 aa29.76■■■□□ 2.36
CCDC47-204ENST00000582252 C19orf44Q9H6X5 657 aa29.76■■■□□ 2.36
CCDC47-204ENST00000582252 EDC4Q6P2E9 1401 aaKnown RBP29.75■■■□□ 2.35
CCDC47-204ENST00000582252 TSHZ2Q9NRE2 1034 aa29.74■■■□□ 2.35
CCDC47-204ENST00000582252 LRRC7Q96NW7 1537 aa29.74■■■□□ 2.35
CCDC47-204ENST00000582252 SLFN5Q08AF3 891 aa29.73■■■□□ 2.35
CCDC47-204ENST00000582252 DUSP27Q5VZP5 1158 aa29.73■■■□□ 2.35
CCDC47-204ENST00000582252 ZNF692Q9BU19 519 aaPredicted RBP29.72■■■□□ 2.35
CCDC47-204ENST00000582252 NCBP3Q53F19 620 aaKnown RBP29.71■■■□□ 2.35
CCDC47-204ENST00000582252 E9PSI1 815 aa29.71■■■□□ 2.35
CCDC47-204ENST00000582252 IQSEC2Q5JU85 1478 aa29.7■■■□□ 2.35
CCDC47-204ENST00000582252 B4GALNT3Q6L9W6 998 aa29.7■■■□□ 2.34
CCDC47-204ENST00000582252 MSH6P52701 1360 aa29.69■■■□□ 2.34
CCDC47-204ENST00000582252 NRKQ7Z2Y5 1582 aa29.68■■■□□ 2.34
CCDC47-204ENST00000582252 ACEP12821 1306 aa29.68■■■□□ 2.34
CCDC47-204ENST00000582252 AEBP2Q6ZN18 517 aaPredicted RBP29.68■■■□□ 2.34
CCDC47-204ENST00000582252 TRMT2AQ8IZ69 625 aaKnown RBP29.68■■■□□ 2.34
CCDC47-204ENST00000582252 COL3A1P02461 1466 aaPredicted RBP29.67■■■□□ 2.34
CCDC47-204ENST00000582252 ATF3P18847 181 aa29.66■■■□□ 2.34
CCDC47-204ENST00000582252 CCDC136Q96JN2 1154 aa29.66■■■□□ 2.34
CCDC47-204ENST00000582252 USP6P35125 1406 aa29.65■■■□□ 2.34
CCDC47-204ENST00000582252 U2AF1L5P0DN76 240 aaPredicted RBP29.64■■■□□ 2.34
CCDC47-204ENST00000582252 U2AF1Q01081 240 aaKnown RBP eCLIP29.64■■■□□ 2.34
CCDC47-204ENST00000582252 PMFBP1Q8TBY8 1022 aa29.64■■■□□ 2.34
CCDC47-204ENST00000582252 KIF1AQ12756 1690 aa29.63■■■□□ 2.33
CCDC47-204ENST00000582252 CADPS2Q86UW7 1296 aa29.63■■■□□ 2.33
CCDC47-204ENST00000582252 NGDNQ8NEJ9 315 aaKnown RBP29.63■■■□□ 2.33
CCDC47-204ENST00000582252 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.62■■■□□ 2.33
CCDC47-204ENST00000582252 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.62■■■□□ 2.33
CCDC47-204ENST00000582252 CCDC27Q2M243 656 aa29.62■■■□□ 2.33
CCDC47-204ENST00000582252 WWC1Q8IX03 1113 aa29.62■■■□□ 2.33
CCDC47-204ENST00000582252 TCP11L2Q8N4U5 519 aa29.62■■■□□ 2.33
CCDC47-204ENST00000582252 PHF8Q9UPP1 1060 aa29.62■■■□□ 2.33
CCDC47-204ENST00000582252 C1orf167Q5SNV9 1468 aa29.61■■■□□ 2.33
CCDC47-204ENST00000582252 PNNQ9H307 717 aaKnown RBP29.61■■■□□ 2.33
CCDC47-204ENST00000582252 PNPLA6Q8IY17 1366 aa29.61■■■□□ 2.33
CCDC47-204ENST00000582252 MST1RQ04912 1400 aa29.61■■■□□ 2.33
CCDC47-204ENST00000582252 ESCO1Q5FWF5 840 aa29.59■■■□□ 2.33
CCDC47-204ENST00000582252 DIAPH1O60610 1272 aaKnown RBP29.58■■■□□ 2.33
CCDC47-204ENST00000582252 WDR63Q8IWG1 891 aa29.58■■■□□ 2.33
CCDC47-204ENST00000582252 MAP2P11137 1827 aaKnown RBP29.57■■■□□ 2.32
CCDC47-204ENST00000582252 SSH2Q76I76 1423 aa29.57■■■□□ 2.32
CCDC47-204ENST00000582252 LTBP4Q8N2S1 1624 aa29.56■■■□□ 2.32
CCDC47-204ENST00000582252 PHF23Q9BUL5 403 aaPredicted RBP29.56■■■□□ 2.32
CCDC47-204ENST00000582252 TTC21BQ7Z4L5 1316 aa29.55■■■□□ 2.32
CCDC47-204ENST00000582252 U2SURPO15042 1029 aaKnown RBP29.55■■■□□ 2.32
CCDC47-204ENST00000582252 AATKQ6ZMQ8 1374 aa29.55■■■□□ 2.32
CCDC47-204ENST00000582252 EXOC6Q8TAG9 804 aa29.54■■■□□ 2.32
CCDC47-204ENST00000582252 TTC21AQ8NDW8 1320 aa29.54■■■□□ 2.32
CCDC47-204ENST00000582252 COG3Q96JB2 828 aa29.54■■■□□ 2.32
CCDC47-204ENST00000582252 MAPK8IP3Q9UPT6 1336 aa29.52■■■□□ 2.32
CCDC47-204ENST00000582252 ORAI2Q96SN7 254 aa29.52■■■□□ 2.32
CCDC47-204ENST00000582252 NEUROD2Q15784 382 aa29.51■■■□□ 2.31
CCDC47-204ENST00000582252 SPINK5Q9NQ38 1064 aaPredicted RBP29.51■■■□□ 2.31
CCDC47-204ENST00000582252 CDK12Q9NYV4 1490 aaPredicted RBP29.5■■■□□ 2.31
CCDC47-204ENST00000582252 NME9Q86XW9 330 aa29.5■■■□□ 2.31
CCDC47-204ENST00000582252 POLKQ9UBT6 870 aa29.5■■■□□ 2.31
CCDC47-204ENST00000582252 RRP7AQ9Y3A4 280 aaKnown RBP29.48■■■□□ 2.31
CCDC47-204ENST00000582252 PLIN1O60240 522 aa29.48■■■□□ 2.31
CCDC47-204ENST00000582252 PIK3C2AO00443 1686 aa29.48■■■□□ 2.31
CCDC47-204ENST00000582252 PLEKHF1Q96S99 279 aa29.47■■■□□ 2.31
CCDC47-204ENST00000582252 USP54Q70EL1 1684 aa29.46■■■□□ 2.31
CCDC47-204ENST00000582252 PSME1Q06323 249 aa29.45■■■□□ 2.31
CCDC47-204ENST00000582252 MYH16Q9H6N6 1097 aa29.45■■■□□ 2.31
CCDC47-204ENST00000582252 OVOS2A0A0J9YW53 1432 aa29.45■■■□□ 2.3
CCDC47-204ENST00000582252 OVOS2Q6IE36 1432 aa29.45■■■□□ 2.3
CCDC47-204ENST00000582252 NEFMP07197 916 aa29.45■■■□□ 2.3
CCDC47-204ENST00000582252 FCHSD2O94868 740 aa29.44■■■□□ 2.3
CCDC47-204ENST00000582252 FOXO3O43524 673 aa29.42■■■□□ 2.3
CCDC47-204ENST00000582252 CRBNQ96SW2 442 aa29.42■■■□□ 2.3
CCDC47-204ENST00000582252 TRPM3Q9HCF6 1732 aaPredicted RBP29.42■■■□□ 2.3
CCDC47-204ENST00000582252 PPM1GO15355 546 aaPredicted RBP29.42■■■□□ 2.3
CCDC47-204ENST00000582252 USP31Q70CQ4 1352 aa29.42■■■□□ 2.3
CCDC47-204ENST00000582252 TMPOP42166 694 aaKnown RBP29.41■■■□□ 2.3
CCDC47-204ENST00000582252 SLAIN2Q9P270 581 aa29.41■■■□□ 2.3
CCDC47-204ENST00000582252 ZRANB1Q9UGI0 708 aa29.4■■■□□ 2.3
CCDC47-204ENST00000582252 MARF1Q9Y4F3 1742 aaKnown RBP29.39■■■□□ 2.29
CCDC47-204ENST00000582252 PAK3O75914 559 aaPredicted RBP29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms