RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 SPATA31A6Q5VVP1 1343 aa27.76■■■□□ 2.03
TOP3A-213ENST00000582230 LMOD2Q6P5Q4 547 aa27.76■■■□□ 2.03
TOP3A-213ENST00000582230 SSH2Q76I76 1423 aa27.75■■■□□ 2.03
TOP3A-213ENST00000582230 TRPM3Q9HCF6 1732 aaPredicted RBP27.75■■■□□ 2.03
TOP3A-213ENST00000582230 TTC21BQ7Z4L5 1316 aa27.73■■■□□ 2.03
TOP3A-213ENST00000582230 TTC21AQ8NDW8 1320 aa27.73■■■□□ 2.03
TOP3A-213ENST00000582230 SHPRHQ149N8 1683 aa27.73■■■□□ 2.03
TOP3A-213ENST00000582230 CCDC7Q96M83 1385 aa27.73■■■□□ 2.03
TOP3A-213ENST00000582230 WASHC2AQ641Q2 1341 aa27.72■■■□□ 2.03
TOP3A-213ENST00000582230 ABTB2Q8N961 1025 aa27.72■■■□□ 2.03
TOP3A-213ENST00000582230 AKAP12Q02952 1782 aa27.72■■■□□ 2.03
TOP3A-213ENST00000582230 EDC4Q6P2E9 1401 aaKnown RBP27.72■■■□□ 2.03
TOP3A-213ENST00000582230 MYOM1P52179 1685 aa27.69■■■□□ 2.02
TOP3A-213ENST00000582230 ALS2Q96Q42 1657 aa27.68■■■□□ 2.02
TOP3A-213ENST00000582230 COL22A1Q8NFW1 1626 aaPredicted RBP27.67■■■□□ 2.02
TOP3A-213ENST00000582230 MON2Q7Z3U7 1717 aa27.67■■■□□ 2.02
TOP3A-213ENST00000582230 NLRP13Q86W25 1043 aa27.67■■■□□ 2.02
TOP3A-213ENST00000582230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.67■■■□□ 2.02
TOP3A-213ENST00000582230 NUTM2BA6NNL0 878 aaPredicted RBP27.65■■■□□ 2.02
TOP3A-213ENST00000582230 NUTM2EB1AL46 878 aaPredicted RBP27.65■■■□□ 2.02
TOP3A-213ENST00000582230 NUTM2AQ8IVF1 878 aaPredicted RBP27.65■■■□□ 2.02
TOP3A-213ENST00000582230 PANK3Q9H999 370 aa27.65■■■□□ 2.02
TOP3A-213ENST00000582230 NRKQ7Z2Y5 1582 aa27.65■■■□□ 2.02
TOP3A-213ENST00000582230 NLRP6P59044 892 aa27.64■■■□□ 2.02
TOP3A-213ENST00000582230 NUTM2GQ5VZR2 741 aa27.64■■■□□ 2.02
TOP3A-213ENST00000582230 CARD14Q9BXL6 1004 aa27.64■■■□□ 2.02
TOP3A-213ENST00000582230 HAP1P54257 671 aaPredicted RBP27.62■■■□□ 2.01
TOP3A-213ENST00000582230 CABLES1Q8TDN4 633 aa27.61■■■□□ 2.01
TOP3A-213ENST00000582230 MED1Q15648 1581 aaPredicted RBP27.6■■■□□ 2.01
TOP3A-213ENST00000582230 NME9Q86XW9 330 aa27.6■■■□□ 2.01
TOP3A-213ENST00000582230 NSD3Q9BZ95 1437 aa27.59■■■□□ 2.01
TOP3A-213ENST00000582230 PLEKHG5O94827 1062 aa27.59■■■□□ 2.01
TOP3A-213ENST00000582230 USP19O94966 1318 aa27.59■■■□□ 2.01
TOP3A-213ENST00000582230 USP31Q70CQ4 1352 aa27.59■■■□□ 2.01
TOP3A-213ENST00000582230 LRP6O75581 1613 aa27.57■■■□□ 2
TOP3A-213ENST00000582230 PIK3C2AO00443 1686 aa27.57■■■□□ 2
TOP3A-213ENST00000582230 MEX3CQ5U5Q3 659 aaKnown RBP27.57■■■□□ 2
TOP3A-213ENST00000582230 CGNL1Q0VF96 1302 aa27.57■■■□□ 2
TOP3A-213ENST00000582230 FYB1O15117 783 aa27.55■■■□□ 2
TOP3A-213ENST00000582230 ADAMTS2O95450 1211 aa27.55■■■□□ 2
TOP3A-213ENST00000582230 GCP02774 474 aa27.54■■■□□ 2
TOP3A-213ENST00000582230 KNSTRNQ9Y448 316 aa27.54■■■□□ 2
TOP3A-213ENST00000582230 KCNH5Q8NCM2 988 aa27.53■■■□□ 2
TOP3A-213ENST00000582230 COG3Q96JB2 828 aa27.53■■■□□ 2
TOP3A-213ENST00000582230 ZRANB1Q9UGI0 708 aa27.53■■■□□ 2
TOP3A-213ENST00000582230 OVOS2A0A0J9YW53 1432 aa27.5■■□□□ 1.99
TOP3A-213ENST00000582230 OVOS2Q6IE36 1432 aa27.5■■□□□ 1.99
TOP3A-213ENST00000582230 GGNBP2Q9H3C7 697 aa27.5■■□□□ 1.99
TOP3A-213ENST00000582230 SLIT3O75094 1523 aa27.5■■□□□ 1.99
TOP3A-213ENST00000582230 ZNF316A6NFI3 1004 aaPredicted RBP27.49■■□□□ 1.99
TOP3A-213ENST00000582230 PER1O15534 1290 aaPredicted RBP27.49■■□□□ 1.99
TOP3A-213ENST00000582230 CRYBG1Q9Y4K1 1723 aa27.49■■□□□ 1.99
TOP3A-213ENST00000582230 ABCA3Q99758 1704 aa27.48■■□□□ 1.99
TOP3A-213ENST00000582230 C8orf37Q96NL8 207 aa27.48■■□□□ 1.99
TOP3A-213ENST00000582230 USP54Q70EL1 1684 aa27.47■■□□□ 1.99
TOP3A-213ENST00000582230 NGLY1Q96IV0 654 aa27.47■■□□□ 1.99
TOP3A-213ENST00000582230 NSD2O96028 1365 aa27.47■■□□□ 1.99
TOP3A-213ENST00000582230 PHRF1Q9P1Y6 1649 aaKnown RBP27.46■■□□□ 1.99
TOP3A-213ENST00000582230 ZC3H6P61129 1189 aaKnown RBP27.46■■□□□ 1.99
TOP3A-213ENST00000582230 CPDO75976 1380 aa27.46■■□□□ 1.99
TOP3A-213ENST00000582230 PRDM11Q9NQV5 511 aa27.45■■□□□ 1.98
TOP3A-213ENST00000582230 KIAA0232Q92628 1395 aa27.44■■□□□ 1.98
TOP3A-213ENST00000582230 FAM83GA6ND36 823 aa27.43■■□□□ 1.98
TOP3A-213ENST00000582230 PHF23Q9BUL5 403 aaPredicted RBP27.43■■□□□ 1.98
TOP3A-213ENST00000582230 MARF1Q9Y4F3 1742 aaKnown RBP27.42■■□□□ 1.98
TOP3A-213ENST00000582230 SOX12O15370 315 aa27.42■■□□□ 1.98
TOP3A-213ENST00000582230 AMER1Q5JTC6 1135 aaPredicted RBP27.42■■□□□ 1.98
TOP3A-213ENST00000582230 FNBP4Q8N3X1 1017 aaPredicted RBP27.42■■□□□ 1.98
TOP3A-213ENST00000582230 KIF20BQ96Q89 1820 aa27.41■■□□□ 1.98
TOP3A-213ENST00000582230 ARHGEF25Q86VW2 580 aa27.4■■□□□ 1.98
TOP3A-213ENST00000582230 AFF2P51816 1311 aa27.4■■□□□ 1.98
TOP3A-213ENST00000582230 DDX10Q13206 875 aaKnown RBP27.39■■□□□ 1.98
TOP3A-213ENST00000582230 NFAT5O94916 1531 aa27.39■■□□□ 1.98
TOP3A-213ENST00000582230 NPC1L1Q9UHC9 1359 aa27.38■■□□□ 1.97
TOP3A-213ENST00000582230 ZNF772Q68DY9 489 aaPredicted RBP27.38■■□□□ 1.97
TOP3A-213ENST00000582230 CHRNA2Q15822 529 aa27.37■■□□□ 1.97
TOP3A-213ENST00000582230 AATKQ6ZMQ8 1374 aa27.36■■□□□ 1.97
TOP3A-213ENST00000582230 USP21Q9UK80 565 aa27.36■■□□□ 1.97
TOP3A-213ENST00000582230 SLIT2O94813 1529 aa27.36■■□□□ 1.97
TOP3A-213ENST00000582230 ZBTB7CA1YPR0 619 aa27.35■■□□□ 1.97
TOP3A-213ENST00000582230 MORC1Q86VD1 984 aa27.35■■□□□ 1.97
TOP3A-213ENST00000582230 COL14A1Q05707 1796 aaKnown RBP27.35■■□□□ 1.97
TOP3A-213ENST00000582230 ILDR2Q71H61 639 aa27.34■■□□□ 1.97
TOP3A-213ENST00000582230 BTG4Q9NY30 223 aa27.34■■□□□ 1.97
TOP3A-213ENST00000582230 CC2D1BQ5T0F9 858 aaKnown RBP27.32■■□□□ 1.96
TOP3A-213ENST00000582230 UNC5CLQ8IV45 518 aa27.32■■□□□ 1.96
TOP3A-213ENST00000582230 RGS17Q9UGC6 210 aaPredicted RBP27.31■■□□□ 1.96
TOP3A-213ENST00000582230 BCL9LQ86UU0 1499 aa27.31■■□□□ 1.96
TOP3A-213ENST00000582230 FBLN1P23142 703 aa27.3■■□□□ 1.96
TOP3A-213ENST00000582230 MAP3K19Q56UN5 1328 aa27.3■■□□□ 1.96
TOP3A-213ENST00000582230 ABCC6O95255 1503 aa27.29■■□□□ 1.96
TOP3A-213ENST00000582230 ANKRD26Q9UPS8 1709 aa27.29■■□□□ 1.96
TOP3A-213ENST00000582230 RRS1Q15050 365 aaKnown RBP27.28■■□□□ 1.96
TOP3A-213ENST00000582230 TRPC5Q9UL62 973 aaPredicted RBP27.28■■□□□ 1.96
TOP3A-213ENST00000582230 SOCS7O14512 581 aa27.27■■□□□ 1.96
TOP3A-213ENST00000582230 TNNT2P45379 298 aaPredicted RBP27.27■■□□□ 1.96
TOP3A-213ENST00000582230 AMPHP49418 695 aa27.27■■□□□ 1.96
TOP3A-213ENST00000582230 EVA1CP58658 441 aa27.27■■□□□ 1.96
TOP3A-213ENST00000582230 IP6K1Q92551 441 aa27.27■■□□□ 1.96
TOP3A-213ENST00000582230 QTRT2Q9H974 415 aaKnown RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms