RNA–Protein interactions for RNA: ENST00000581564.1

KRT222-204, Transcript of keratin 222, humanhuman

TSL 1 (best)

Gene KRT222, Length 1,116 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT222-204ENST00000581564 KCNH2Q12809 1159 aa10.48□□□□□ -0.73
KRT222-204ENST00000581564 PCDHB15Q9Y5E8 787 aa10.48□□□□□ -0.73
KRT222-204ENST00000581564 LINC01559Q495D7 138 aa10.47□□□□□ -0.73
KRT222-204ENST00000581564 TERTO14746 1132 aaKnown RBP10.46□□□□□ -0.73
KRT222-204ENST00000581564 CAPN5O15484 640 aaPredicted RBP10.46□□□□□ -0.73
KRT222-204ENST00000581564 WIPF1O43516 503 aa10.46□□□□□ -0.73
KRT222-204ENST00000581564 ZBTB3Q9H5J0 574 aa10.46□□□□□ -0.73
KRT222-204ENST00000581564 PRPF38BQ5VTL8 546 aaKnown RBP10.45□□□□□ -0.74
KRT222-204ENST00000581564 ZNF511Q8NB15 262 aa10.45□□□□□ -0.74
KRT222-204ENST00000581564 BAP1Q92560 729 aa10.45□□□□□ -0.74
KRT222-204ENST00000581564 BMP1P13497 986 aa10.44□□□□□ -0.74
KRT222-204ENST00000581564 HRCP23327 699 aa10.44□□□□□ -0.74
KRT222-204ENST00000581564 TLL2Q9Y6L7 1015 aa10.44□□□□□ -0.74
KRT222-204ENST00000581564 MYSM1Q5VVJ2 828 aa10.43□□□□□ -0.74
KRT222-204ENST00000581564 PLEKHG3A1L390 1219 aa10.42□□□□□ -0.74
KRT222-204ENST00000581564 VARSP26640 1264 aaKnown RBP10.42□□□□□ -0.74
KRT222-204ENST00000581564 INSM1Q01101 510 aaPredicted RBP10.42□□□□□ -0.74
KRT222-204ENST00000581564 CSPP1Q1MSJ5 1256 aa10.42□□□□□ -0.74
KRT222-204ENST00000581564 RSPH6AQ9H0K4 717 aa10.42□□□□□ -0.74
KRT222-204ENST00000581564 TUSC1Q2TAM9 212 aa10.41□□□□□ -0.74
KRT222-204ENST00000581564 LYPD8Q6UX82 237 aa10.41□□□□□ -0.74
KRT222-204ENST00000581564 TRIM46Q7Z4K8 759 aa10.41□□□□□ -0.74
KRT222-204ENST00000581564 NUTM2BA6NNL0 878 aaPredicted RBP10.4□□□□□ -0.74
KRT222-204ENST00000581564 NUTM2EB1AL46 878 aaPredicted RBP10.4□□□□□ -0.74
KRT222-204ENST00000581564 CFAP99D6REC4 459 aa10.4□□□□□ -0.74
KRT222-204ENST00000581564 CTHP32929 405 aa10.4□□□□□ -0.74
KRT222-204ENST00000581564 SUZ12Q15022 739 aaKnown RBP10.4□□□□□ -0.74
KRT222-204ENST00000581564 LCE2CQ5TA81 110 aa10.4□□□□□ -0.74
KRT222-204ENST00000581564 NUTM2DQ5VT03 806 aaPredicted RBP10.4□□□□□ -0.74
KRT222-204ENST00000581564 NUTM2AQ8IVF1 878 aaPredicted RBP10.4□□□□□ -0.74
KRT222-204ENST00000581564 MPNDQ8N594 471 aa10.4□□□□□ -0.74
KRT222-204ENST00000581564 CABLES1Q8TDN4 633 aa10.4□□□□□ -0.74
KRT222-204ENST00000581564 LIMD1Q9UGP4 676 aa10.4□□□□□ -0.74
KRT222-204ENST00000581564 NNTQ13423 1086 aa10.38□□□□□ -0.75
KRT222-204ENST00000581564 SLC16A10Q8TF71 515 aa10.38□□□□□ -0.75
KRT222-204ENST00000581564 LILRB3O75022 631 aa10.37□□□□□ -0.75
KRT222-204ENST00000581564 NXF1Q9UBU9 619 aaKnown RBP10.37□□□□□ -0.75
KRT222-204ENST00000581564 CLK2P49760 499 aaKnown RBP10.36□□□□□ -0.75
KRT222-204ENST00000581564 FAM174AQ8TBP5 190 aa10.36□□□□□ -0.75
KRT222-204ENST00000581564 F12P00748 615 aaPredicted RBP10.35□□□□□ -0.75
KRT222-204ENST00000581564 QPCTQ16769 361 aa10.35□□□□□ -0.75
KRT222-204ENST00000581564 KDM4CQ9H3R0 1056 aa10.35□□□□□ -0.75
KRT222-204ENST00000581564 POLR3EQ9NVU0 708 aa10.35□□□□□ -0.75
KRT222-204ENST00000581564 MAP10Q9P2G4 905 aa10.35□□□□□ -0.75
KRT222-204ENST00000581564 ADH1CP00326 375 aa10.34□□□□□ -0.75
KRT222-204ENST00000581564 NPAS3Q8IXF0 933 aa10.34□□□□□ -0.75
KRT222-204ENST00000581564 TSC1Q92574 1164 aa10.34□□□□□ -0.75
KRT222-204ENST00000581564 ZFP42Q96MM3 310 aa10.33□□□□□ -0.76
KRT222-204ENST00000581564 GPBP1L1Q9HC44 474 aaPredicted RBP10.33□□□□□ -0.76
KRT222-204ENST00000581564 TIMP2P16035 220 aa10.32□□□□□ -0.76
KRT222-204ENST00000581564 WDR4P57081 412 aaKnown RBP10.32□□□□□ -0.76
KRT222-204ENST00000581564 FOXJ1Q92949 421 aa10.32□□□□□ -0.76
KRT222-204ENST00000581564 DDRGK1Q96HY6 314 aa10.32□□□□□ -0.76
KRT222-204ENST00000581564 SCARF1Q14162 830 aa10.31□□□□□ -0.76
KRT222-204ENST00000581564 RTL5Q5HYW3 569 aaPredicted RBP10.31□□□□□ -0.76
KRT222-204ENST00000581564 MRPL14Q6P1L8 145 aaKnown RBP10.31□□□□□ -0.76
KRT222-204ENST00000581564 HELBQ8NG08 1087 aaPredicted RBP10.31□□□□□ -0.76
KRT222-204ENST00000581564 CDK15Q96Q40 435 aa10.31□□□□□ -0.76
KRT222-204ENST00000581564 PER1O15534 1290 aaPredicted RBP10.3□□□□□ -0.76
KRT222-204ENST00000581564 SKIV2LQ15477 1246 aaKnown RBP10.3□□□□□ -0.76
KRT222-204ENST00000581564 IRF7Q92985 503 aa10.3□□□□□ -0.76
KRT222-204ENST00000581564 FAM117AQ9C073 453 aa10.3□□□□□ -0.76
KRT222-204ENST00000581564 ARID5BQ14865 1188 aa10.29□□□□□ -0.76
KRT222-204ENST00000581564 AGERQ15109 404 aa10.29□□□□□ -0.76
KRT222-204ENST00000581564 H3BM21 787 aa10.28□□□□□ -0.76
KRT222-204ENST00000581564 SH3D19Q5HYK7 790 aa10.28□□□□□ -0.76
KRT222-204ENST00000581564 BPHLQ86WA6 291 aaPredicted RBP10.28□□□□□ -0.76
KRT222-204ENST00000581564 PURBQ96QR8 312 aaKnown RBP10.28□□□□□ -0.76
KRT222-204ENST00000581564 KLF16Q9BXK1 252 aaPredicted RBP10.28□□□□□ -0.76
KRT222-204ENST00000581564 NR5A1Q13285 461 aa10.27□□□□□ -0.77
KRT222-204ENST00000581564 ATP1B4Q9UN42 357 aaPredicted RBP10.27□□□□□ -0.77
KRT222-204ENST00000581564 GMPRP36959 345 aa10.26□□□□□ -0.77
KRT222-204ENST00000581564 VEGFBP49765 207 aa10.26□□□□□ -0.77
KRT222-204ENST00000581564 ARMC2Q8NEN0 867 aa10.26□□□□□ -0.77
KRT222-204ENST00000581564 ZIC2O95409 532 aaPredicted RBP10.25□□□□□ -0.77
KRT222-204ENST00000581564 C4orf48Q5BLP8 95 aa10.25□□□□□ -0.77
KRT222-204ENST00000581564 NBPF14Q5TI25 921 aa10.24□□□□□ -0.77
KRT222-204ENST00000581564 PROCA1Q8NCQ7 364 aaPredicted RBP10.24□□□□□ -0.77
KRT222-204ENST00000581564 FAM181BA6NEQ2 426 aa10.23□□□□□ -0.77
KRT222-204ENST00000581564 NR3C2P08235 984 aa10.23□□□□□ -0.77
KRT222-204ENST00000581564 ITPKCQ96DU7 683 aa10.23□□□□□ -0.77
KRT222-204ENST00000581564 ZFAND3Q9H8U3 227 aa10.23□□□□□ -0.77
KRT222-204ENST00000581564 GRM5P41594 1212 aa10.22□□□□□ -0.77
KRT222-204ENST00000581564 CTDSPL2Q05D32 466 aa10.22□□□□□ -0.77
KRT222-204ENST00000581564 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.21□□□□□ -0.77
KRT222-204ENST00000581564 C1QTNF2Q9BXJ5 285 aa10.21□□□□□ -0.77
KRT222-204ENST00000581564 ERBB4Q15303 1308 aa10.21□□□□□ -0.78
KRT222-204ENST00000581564 PPP2R2DQ66LE6 453 aa10.2□□□□□ -0.78
KRT222-204ENST00000581564 SH3RF1Q7Z6J0 888 aa10.2□□□□□ -0.78
KRT222-204ENST00000581564 ZSCAN1Q8NBB4 408 aa10.2□□□□□ -0.78
KRT222-204ENST00000581564 SOBPA7XYQ1 873 aa10.19□□□□□ -0.78
KRT222-204ENST00000581564 UPP2O95045 317 aa10.19□□□□□ -0.78
KRT222-204ENST00000581564 FSHRP23945 695 aa10.19□□□□□ -0.78
KRT222-204ENST00000581564 C6orf118Q5T5N4 469 aa10.19□□□□□ -0.78
KRT222-204ENST00000581564 MAP4K5Q9Y4K4 846 aa10.19□□□□□ -0.78
KRT222-204ENST00000581564 MAN1A2O60476 641 aa10.18□□□□□ -0.78
KRT222-204ENST00000581564 NEUROD2Q15784 382 aa10.18□□□□□ -0.78
KRT222-204ENST00000581564 SH3BP5LQ7L8J4 393 aa10.18□□□□□ -0.78
KRT222-204ENST00000581564 TRMT44Q8IYL2 757 aaKnown RBP10.18□□□□□ -0.78
KRT222-204ENST00000581564 MEIOBQ8N635 442 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms