RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 KRT28Q7Z3Y7 464 aa14.02□□□□□ -0.17
TOP3A-211ENST00000581536 PMFBP1Q8TBY8 1022 aa14.02□□□□□ -0.17
TOP3A-211ENST00000581536 USP32Q8NFA0 1604 aa14.01□□□□□ -0.17
TOP3A-211ENST00000581536 NPHP3Q7Z494 1330 aa14.01□□□□□ -0.17
TOP3A-211ENST00000581536 IFNLR1Q8IU57 520 aaPredicted RBP14.01□□□□□ -0.17
TOP3A-211ENST00000581536 PHF8Q9UPP1 1060 aa14.01□□□□□ -0.17
TOP3A-211ENST00000581536 KIAA1210Q9ULL0 1709 aa14.01□□□□□ -0.17
TOP3A-211ENST00000581536 PXDNQ92626 1479 aa14□□□□□ -0.17
TOP3A-211ENST00000581536 PRR36Q9H6K5 1346 aa14□□□□□ -0.17
TOP3A-211ENST00000581536 WASLO00401 505 aaPredicted RBP14□□□□□ -0.17
TOP3A-211ENST00000581536 C8orf37Q96NL8 207 aa14□□□□□ -0.17
TOP3A-211ENST00000581536 KLHL34Q8N239 644 aa13.99□□□□□ -0.17
TOP3A-211ENST00000581536 AFF2P51816 1311 aa13.98□□□□□ -0.17
TOP3A-211ENST00000581536 NBPF8Q3BBV2 869 aa13.98□□□□□ -0.17
TOP3A-211ENST00000581536 PSME1Q06323 249 aa13.97□□□□□ -0.17
TOP3A-211ENST00000581536 NGLY1Q96IV0 654 aa13.97□□□□□ -0.17
TOP3A-211ENST00000581536 CDK19Q9BWU1 502 aa13.97□□□□□ -0.17
TOP3A-211ENST00000581536 SPATA31A3Q5VYP0 1347 aa13.96□□□□□ -0.17
TOP3A-211ENST00000581536 KIF1AQ12756 1690 aa13.96□□□□□ -0.17
TOP3A-211ENST00000581536 ZNF772Q68DY9 489 aaPredicted RBP13.96□□□□□ -0.17
TOP3A-211ENST00000581536 ADGRB2O60241 1585 aa13.96□□□□□ -0.18
TOP3A-211ENST00000581536 COL22A1Q8NFW1 1626 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-211ENST00000581536 CABLES1Q8TDN4 633 aa13.95□□□□□ -0.18
TOP3A-211ENST00000581536 NUDT16Q96DE0 195 aaKnown RBP13.95□□□□□ -0.18
TOP3A-211ENST00000581536 QTRT2Q9H974 415 aaKnown RBP13.95□□□□□ -0.18
TOP3A-211ENST00000581536 LMOD2Q6P5Q4 547 aa13.94□□□□□ -0.18
TOP3A-211ENST00000581536 TRPM1Q7Z4N2 1603 aa13.93□□□□□ -0.18
TOP3A-211ENST00000581536 MARF1Q9Y4F3 1742 aaKnown RBP13.93□□□□□ -0.18
TOP3A-211ENST00000581536 ANKARQ7Z5J8 1434 aa13.92□□□□□ -0.18
TOP3A-211ENST00000581536 RXRBP28702 533 aa13.92□□□□□ -0.18
TOP3A-211ENST00000581536 TULP4Q9NRJ4 1543 aa13.91□□□□□ -0.18
TOP3A-211ENST00000581536 NGDNQ8NEJ9 315 aaKnown RBP13.91□□□□□ -0.18
TOP3A-211ENST00000581536 CABP2Q9NPB3 220 aa13.91□□□□□ -0.18
TOP3A-211ENST00000581536 USP21Q9UK80 565 aa13.91□□□□□ -0.18
TOP3A-211ENST00000581536 TRPM3Q9HCF6 1732 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-211ENST00000581536 FNBP4Q8N3X1 1017 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-211ENST00000581536 CENPJQ9HC77 1338 aaPredicted RBP13.9□□□□□ -0.19
TOP3A-211ENST00000581536 QRICH2Q9H0J4 1663 aa13.89□□□□□ -0.19
TOP3A-211ENST00000581536 SBNO1A3KN83 1393 aa13.89□□□□□ -0.19
TOP3A-211ENST00000581536 PAK3O75914 559 aaPredicted RBP13.89□□□□□ -0.19
TOP3A-211ENST00000581536 PCGF6Q9BYE7 350 aa13.89□□□□□ -0.19
TOP3A-211ENST00000581536 SRPK2P78362 688 aaKnown RBP13.88□□□□□ -0.19
TOP3A-211ENST00000581536 SPOCK2Q92563 424 aa13.88□□□□□ -0.19
TOP3A-211ENST00000581536 TNS3Q68CZ2 1445 aa13.88□□□□□ -0.19
TOP3A-211ENST00000581536 ACEP12821 1306 aa13.88□□□□□ -0.19
TOP3A-211ENST00000581536 ATP7BP35670 1465 aa13.87□□□□□ -0.19
TOP3A-211ENST00000581536 ITSN1Q15811 1721 aa13.87□□□□□ -0.19
TOP3A-211ENST00000581536 ROCK2O75116 1388 aaKnown RBP13.87□□□□□ -0.19
TOP3A-211ENST00000581536 CCDC61Q9Y6R9 512 aa13.87□□□□□ -0.19
TOP3A-211ENST00000581536 BCL9LQ86UU0 1499 aa13.87□□□□□ -0.19
TOP3A-211ENST00000581536 EIF3AQ14152 1382 aaKnown RBP13.86□□□□□ -0.19
TOP3A-211ENST00000581536 GPRASP1Q5JY77 1395 aa13.86□□□□□ -0.19
TOP3A-211ENST00000581536 ALS2Q96Q42 1657 aa13.86□□□□□ -0.19
TOP3A-211ENST00000581536 PLEKHG3A1L390 1219 aa13.86□□□□□ -0.19
TOP3A-211ENST00000581536 FAM83GA6ND36 823 aa13.86□□□□□ -0.19
TOP3A-211ENST00000581536 RBM6P78332 1123 aaKnown RBP13.86□□□□□ -0.19
TOP3A-211ENST00000581536 NUTM2GQ5VZR2 741 aa13.86□□□□□ -0.19
TOP3A-211ENST00000581536 TONSLQ96HA7 1378 aa13.85□□□□□ -0.19
TOP3A-211ENST00000581536 HAP1P54257 671 aaPredicted RBP13.85□□□□□ -0.19
TOP3A-211ENST00000581536 ABCA3Q99758 1704 aa13.84□□□□□ -0.19
TOP3A-211ENST00000581536 NUBP1P53384 320 aa13.84□□□□□ -0.19
TOP3A-211ENST00000581536 CABP1Q9NZU7 370 aa13.84□□□□□ -0.19
TOP3A-211ENST00000581536 TRPC5Q9UL62 973 aaPredicted RBP13.84□□□□□ -0.19
TOP3A-211ENST00000581536 TOPAZ1Q8N9V7 1692 aa13.84□□□□□ -0.19
TOP3A-211ENST00000581536 CARD11Q9BXL7 1154 aa13.83□□□□□ -0.2
TOP3A-211ENST00000581536 ARHGEF10O15013 1369 aa13.83□□□□□ -0.2
TOP3A-211ENST00000581536 C19orf67A6NJJ6 358 aa13.82□□□□□ -0.2
TOP3A-211ENST00000581536 HAX1O00165 279 aa13.82□□□□□ -0.2
TOP3A-211ENST00000581536 UNC5CLQ8IV45 518 aa13.82□□□□□ -0.2
TOP3A-211ENST00000581536 POLR3AO14802 1390 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-211ENST00000581536 ATRNO75882 1429 aa13.81□□□□□ -0.2
TOP3A-211ENST00000581536 PPIP5K1Q6PFW1 1433 aa13.81□□□□□ -0.2
TOP3A-211ENST00000581536 GJD4Q96KN9 370 aaPredicted RBP13.81□□□□□ -0.2
TOP3A-211ENST00000581536 EVC2Q86UK5 1308 aa13.81□□□□□ -0.2
TOP3A-211ENST00000581536 RGS12O14924 1447 aa13.81□□□□□ -0.2
TOP3A-211ENST00000581536 SLIT2O94813 1529 aa13.8□□□□□ -0.2
TOP3A-211ENST00000581536 UPF1Q92900 1129 aaKnown RBP eCLIP13.8□□□□□ -0.2
TOP3A-211ENST00000581536 CRYBG1Q9Y4K1 1723 aa13.8□□□□□ -0.2
TOP3A-211ENST00000581536 PLCH1Q4KWH8 1693 aa13.79□□□□□ -0.2
TOP3A-211ENST00000581536 ABTB2Q8N961 1025 aa13.79□□□□□ -0.2
TOP3A-211ENST00000581536 ZC3H6P61129 1189 aaKnown RBP13.78□□□□□ -0.2
TOP3A-211ENST00000581536 BTG4Q9NY30 223 aa13.78□□□□□ -0.2
TOP3A-211ENST00000581536 CDK12Q9NYV4 1490 aaPredicted RBP13.78□□□□□ -0.2
TOP3A-211ENST00000581536 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.78□□□□□ -0.2
TOP3A-211ENST00000581536 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
TOP3A-211ENST00000581536 CHRNA2Q15822 529 aa13.77□□□□□ -0.21
TOP3A-211ENST00000581536 BRWD3Q6RI45 1802 aa13.77□□□□□ -0.21
TOP3A-211ENST00000581536 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
TOP3A-211ENST00000581536 NWD2Q9ULI1 1742 aa13.76□□□□□ -0.21
TOP3A-211ENST00000581536 GLI3P10071 1580 aa13.76□□□□□ -0.21
TOP3A-211ENST00000581536 RALGAPBQ86X10 1494 aa13.76□□□□□ -0.21
TOP3A-211ENST00000581536 CCDC9Q9Y3X0 531 aaKnown RBP13.76□□□□□ -0.21
TOP3A-211ENST00000581536 ST20-MTHFSA0A0A6YYL1 179 aa13.75□□□□□ -0.21
TOP3A-211ENST00000581536 VPS72Q15906 364 aa13.75□□□□□ -0.21
TOP3A-211ENST00000581536 FAM212AQ96EL1 285 aa13.75□□□□□ -0.21
TOP3A-211ENST00000581536 PHRF1Q9P1Y6 1649 aaKnown RBP13.75□□□□□ -0.21
TOP3A-211ENST00000581536 EP400Q96L91 3159 aa13.75□□□□□ -0.21
TOP3A-211ENST00000581536 AKAP12Q02952 1782 aa13.74□□□□□ -0.21
TOP3A-211ENST00000581536 COL14A1Q05707 1796 aaKnown RBP13.74□□□□□ -0.21
TOP3A-211ENST00000581536 NRAPQ86VF7 1730 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms