RNA–Protein interactions for RNA: ENST00000581419.1

SKAP1-205, Transcript of src kinase associated phosphoprotein 1, humanhuman

TSL 3

Gene SKAP1, Length 696 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1-205ENST00000581419 UPF1Q92900 1129 aaKnown RBP eCLIP11.15□□□□□ -0.62
SKAP1-205ENST00000581419 ZNF692Q9BU19 519 aaPredicted RBP11.15□□□□□ -0.62
SKAP1-205ENST00000581419 CABP2Q9NPB3 220 aa11.15□□□□□ -0.62
SKAP1-205ENST00000581419 COL16A1Q07092 1604 aaPredicted RBP11.15□□□□□ -0.62
SKAP1-205ENST00000581419 BRD4O60885 1362 aaPredicted RBP11.15□□□□□ -0.63
SKAP1-205ENST00000581419 CDCA8Q53HL2 280 aa11.14□□□□□ -0.63
SKAP1-205ENST00000581419 NGDNQ8NEJ9 315 aaKnown RBP11.14□□□□□ -0.63
SKAP1-205ENST00000581419 PMFBP1Q8TBY8 1022 aa11.14□□□□□ -0.63
SKAP1-205ENST00000581419 DDX17Q92841 729 aaKnown RBP11.14□□□□□ -0.63
SKAP1-205ENST00000581419 POLR3AO14802 1390 aaPredicted RBP11.14□□□□□ -0.63
SKAP1-205ENST00000581419 ATAD2Q6PL18 1390 aa11.14□□□□□ -0.63
SKAP1-205ENST00000581419 USP32Q8NFA0 1604 aa11.13□□□□□ -0.63
SKAP1-205ENST00000581419 ATP7BP35670 1465 aa11.13□□□□□ -0.63
SKAP1-205ENST00000581419 PXDNQ92626 1479 aa11.13□□□□□ -0.63
SKAP1-205ENST00000581419 SPATA31A3Q5VYP0 1347 aa11.13□□□□□ -0.63
SKAP1-205ENST00000581419 QRICH2Q9H0J4 1663 aa11.13□□□□□ -0.63
SKAP1-205ENST00000581419 USP47Q96K76 1375 aa11.13□□□□□ -0.63
SKAP1-205ENST00000581419 EIF4G2P78344 907 aaKnown RBP eCLIP11.12□□□□□ -0.63
SKAP1-205ENST00000581419 TMF1P82094 1093 aa11.12□□□□□ -0.63
SKAP1-205ENST00000581419 CABP1Q9NZU7 370 aa11.12□□□□□ -0.63
SKAP1-205ENST00000581419 RGPD8O14715 1765 aaPredicted RBP11.12□□□□□ -0.63
SKAP1-205ENST00000581419 ACEP12821 1306 aa11.11□□□□□ -0.63
SKAP1-205ENST00000581419 PNPLA6Q8IY17 1366 aa11.11□□□□□ -0.63
SKAP1-205ENST00000581419 PPIP5K1Q6PFW1 1433 aa11.1□□□□□ -0.63
SKAP1-205ENST00000581419 ARHGEF10O15013 1369 aa11.1□□□□□ -0.63
SKAP1-205ENST00000581419 NINLQ9Y2I6 1382 aa11.1□□□□□ -0.63
SKAP1-205ENST00000581419 SHPRHQ149N8 1683 aa11.1□□□□□ -0.63
SKAP1-205ENST00000581419 ITSN1Q15811 1721 aa11.09□□□□□ -0.63
SKAP1-205ENST00000581419 XPCQ01831 940 aaPredicted RBP11.09□□□□□ -0.63
SKAP1-205ENST00000581419 TNS3Q68CZ2 1445 aa11.08□□□□□ -0.64
SKAP1-205ENST00000581419 TERF2IPQ9NYB0 399 aa11.07□□□□□ -0.64
SKAP1-205ENST00000581419 SSUH2Q9Y2M2 353 aa11.07□□□□□ -0.64
SKAP1-205ENST00000581419 CPSF1Q10570 1443 aaKnown RBP11.07□□□□□ -0.64
SKAP1-205ENST00000581419 TOPAZ1Q8N9V7 1692 aa11.07□□□□□ -0.64
SKAP1-205ENST00000581419 COL22A1Q8NFW1 1626 aaPredicted RBP11.06□□□□□ -0.64
SKAP1-205ENST00000581419 HSPA5P11021 654 aaKnown RBP11.06□□□□□ -0.64
SKAP1-205ENST00000581419 SLC12A5Q9H2X9 1139 aa11.06□□□□□ -0.64
SKAP1-205ENST00000581419 SSH2Q76I76 1423 aa11.06□□□□□ -0.64
SKAP1-205ENST00000581419 PAK3O75914 559 aaPredicted RBP11.05□□□□□ -0.64
SKAP1-205ENST00000581419 HDGFL2Q7Z4V5 671 aaPredicted RBP11.05□□□□□ -0.64
SKAP1-205ENST00000581419 NLRP13Q86W25 1043 aa11.05□□□□□ -0.64
SKAP1-205ENST00000581419 TMC1Q8TDI8 760 aa11.05□□□□□ -0.64
SKAP1-205ENST00000581419 TTC21AQ8NDW8 1320 aa11.05□□□□□ -0.64
SKAP1-205ENST00000581419 USP6P35125 1406 aa11.04□□□□□ -0.64
SKAP1-205ENST00000581419 NUTM2BA6NNL0 878 aaPredicted RBP11.04□□□□□ -0.64
SKAP1-205ENST00000581419 NUTM2EB1AL46 878 aaPredicted RBP11.04□□□□□ -0.64
SKAP1-205ENST00000581419 ZNF772Q68DY9 489 aaPredicted RBP11.04□□□□□ -0.64
SKAP1-205ENST00000581419 NUTM2AQ8IVF1 878 aaPredicted RBP11.04□□□□□ -0.64
SKAP1-205ENST00000581419 FNBP4Q8N3X1 1017 aaPredicted RBP11.04□□□□□ -0.64
SKAP1-205ENST00000581419 ABTB2Q8N961 1025 aa11.04□□□□□ -0.64
SKAP1-205ENST00000581419 TRPM3Q9HCF6 1732 aaPredicted RBP11.04□□□□□ -0.64
SKAP1-205ENST00000581419 ZEB1P37275 1124 aaPredicted RBP11.03□□□□□ -0.64
SKAP1-205ENST00000581419 MEX3CQ5U5Q3 659 aaKnown RBP11.03□□□□□ -0.64
SKAP1-205ENST00000581419 LMOD2Q6P5Q4 547 aa11.03□□□□□ -0.64
SKAP1-205ENST00000581419 TTC21BQ7Z4L5 1316 aa11.03□□□□□ -0.64
SKAP1-205ENST00000581419 KTN1Q86UP2 1357 aaKnown RBP11.03□□□□□ -0.64
SKAP1-205ENST00000581419 SPDYE4A6NLX3 237 aa11.02□□□□□ -0.65
SKAP1-205ENST00000581419 NGLY1Q96IV0 654 aa11.02□□□□□ -0.65
SKAP1-205ENST00000581419 LRP6O75581 1613 aa11.02□□□□□ -0.65
SKAP1-205ENST00000581419 ALS2Q96Q42 1657 aa11.01□□□□□ -0.65
SKAP1-205ENST00000581419 ANKRD36BQ8N2N9 1353 aa11.01□□□□□ -0.65
SKAP1-205ENST00000581419 CD163L1Q9NR16 1453 aa11□□□□□ -0.65
SKAP1-205ENST00000581419 ADAMTS2O95450 1211 aa11□□□□□ -0.65
SKAP1-205ENST00000581419 HAP1P54257 671 aaPredicted RBP11□□□□□ -0.65
SKAP1-205ENST00000581419 NLRP6P59044 892 aa11□□□□□ -0.65
SKAP1-205ENST00000581419 REM2Q8IYK8 340 aaPredicted RBP11□□□□□ -0.65
SKAP1-205ENST00000581419 KCNH5Q8NCM2 988 aa11□□□□□ -0.65
SKAP1-205ENST00000581419 CABLES1Q8TDN4 633 aa11□□□□□ -0.65
SKAP1-205ENST00000581419 USP31Q70CQ4 1352 aa11□□□□□ -0.65
SKAP1-205ENST00000581419 GCP02774 474 aa10.99□□□□□ -0.65
SKAP1-205ENST00000581419 C8orf37Q96NL8 207 aa10.99□□□□□ -0.65
SKAP1-205ENST00000581419 USP19O94966 1318 aa10.99□□□□□ -0.65
SKAP1-205ENST00000581419 EDC4Q6P2E9 1401 aaKnown RBP10.99□□□□□ -0.65
SKAP1-205ENST00000581419 AKAP12Q02952 1782 aa10.98□□□□□ -0.65
SKAP1-205ENST00000581419 FAM83GA6ND36 823 aa10.98□□□□□ -0.65
SKAP1-205ENST00000581419 AFF2P51816 1311 aa10.98□□□□□ -0.65
SKAP1-205ENST00000581419 A0A1W2PP64 1363 aa10.98□□□□□ -0.65
SKAP1-205ENST00000581419 C11orf95C9JLR9 678 aaPredicted RBP10.97□□□□□ -0.65
SKAP1-205ENST00000581419 QTRT2Q9H974 415 aaKnown RBP10.97□□□□□ -0.65
SKAP1-205ENST00000581419 USP21Q9UK80 565 aa10.97□□□□□ -0.65
SKAP1-205ENST00000581419 TRPC5Q9UL62 973 aaPredicted RBP10.97□□□□□ -0.65
SKAP1-205ENST00000581419 CPDO75976 1380 aa10.97□□□□□ -0.65
SKAP1-205ENST00000581419 UNC5CLQ8IV45 518 aa10.96□□□□□ -0.65
SKAP1-205ENST00000581419 CARD14Q9BXL6 1004 aa10.96□□□□□ -0.65
SKAP1-205ENST00000581419 MON2Q7Z3U7 1717 aa10.95□□□□□ -0.66
SKAP1-205ENST00000581419 SLIT2O94813 1529 aa10.95□□□□□ -0.66
SKAP1-205ENST00000581419 BCL9LQ86UU0 1499 aa10.95□□□□□ -0.66
SKAP1-205ENST00000581419 FYB1O15117 783 aa10.95□□□□□ -0.66
SKAP1-205ENST00000581419 IFFO2Q5TF58 517 aa10.95□□□□□ -0.66
SKAP1-205ENST00000581419 NUTM2GQ5VZR2 741 aa10.95□□□□□ -0.66
SKAP1-205ENST00000581419 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.95□□□□□ -0.66
SKAP1-205ENST00000581419 PRDM11Q9NQV5 511 aa10.95□□□□□ -0.66
SKAP1-205ENST00000581419 RXRBP28702 533 aa10.94□□□□□ -0.66
SKAP1-205ENST00000581419 RBM6P78332 1123 aaKnown RBP10.94□□□□□ -0.66
SKAP1-205ENST00000581419 ARHGEF25Q86VW2 580 aa10.94□□□□□ -0.66
SKAP1-205ENST00000581419 MARF1Q9Y4F3 1742 aaKnown RBP10.94□□□□□ -0.66
SKAP1-205ENST00000581419 KIF7Q2M1P5 1343 aa10.93□□□□□ -0.66
SKAP1-205ENST00000581419 ZC3H6P61129 1189 aaKnown RBP10.93□□□□□ -0.66
SKAP1-205ENST00000581419 VPS72Q15906 364 aa10.93□□□□□ -0.66
SKAP1-205ENST00000581419 NME9Q86XW9 330 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms