RNA–Protein interactions for RNA: ENST00000581029.5

GAPLINC-203, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-203ENST00000581029 SLAIN2Q9P270 581 aa12.4□□□□□ -0.42
GAPLINC-203ENST00000581029 USP6P35125 1406 aa12.38□□□□□ -0.43
GAPLINC-203ENST00000581029 MON2Q7Z3U7 1717 aa12.38□□□□□ -0.43
GAPLINC-203ENST00000581029 PRKRIP1Q9H875 184 aaPredicted RBP12.38□□□□□ -0.43
GAPLINC-203ENST00000581029 CD163L1Q9NR16 1453 aa12.38□□□□□ -0.43
GAPLINC-203ENST00000581029 CCER2I3L3R5 266 aa12.37□□□□□ -0.43
GAPLINC-203ENST00000581029 AMER1Q5JTC6 1135 aaPredicted RBP12.37□□□□□ -0.43
GAPLINC-203ENST00000581029 PMFBP1Q8TBY8 1022 aa12.37□□□□□ -0.43
GAPLINC-203ENST00000581029 CARD14Q9BXL6 1004 aa12.37□□□□□ -0.43
GAPLINC-203ENST00000581029 RGPD8O14715 1765 aaPredicted RBP12.37□□□□□ -0.43
GAPLINC-203ENST00000581029 TTC21BQ7Z4L5 1316 aa12.37□□□□□ -0.43
GAPLINC-203ENST00000581029 COG3Q96JB2 828 aa12.36□□□□□ -0.43
GAPLINC-203ENST00000581029 MORC1Q86VD1 984 aa12.35□□□□□ -0.43
GAPLINC-203ENST00000581029 MYBBP1AQ9BQG0 1328 aaKnown RBP12.35□□□□□ -0.43
GAPLINC-203ENST00000581029 SBNO1A3KN83 1393 aa12.34□□□□□ -0.43
GAPLINC-203ENST00000581029 PARD3Q8TEW0 1356 aa12.34□□□□□ -0.43
GAPLINC-203ENST00000581029 CC2D1BQ5T0F9 858 aaKnown RBP12.34□□□□□ -0.43
GAPLINC-203ENST00000581029 CERKQ8TCT0 537 aa12.34□□□□□ -0.43
GAPLINC-203ENST00000581029 ORAI2Q96SN7 254 aa12.34□□□□□ -0.43
GAPLINC-203ENST00000581029 SSH2Q76I76 1423 aa12.34□□□□□ -0.43
GAPLINC-203ENST00000581029 USP31Q70CQ4 1352 aa12.33□□□□□ -0.44
GAPLINC-203ENST00000581029 KIF20BQ96Q89 1820 aa12.33□□□□□ -0.44
GAPLINC-203ENST00000581029 FYB1O15117 783 aa12.33□□□□□ -0.44
GAPLINC-203ENST00000581029 FOXO3O43524 673 aa12.33□□□□□ -0.44
GAPLINC-203ENST00000581029 BRINP3Q76B58 766 aa12.33□□□□□ -0.44
GAPLINC-203ENST00000581029 KRT28Q7Z3Y7 464 aa12.33□□□□□ -0.44
GAPLINC-203ENST00000581029 NLRP13Q86W25 1043 aa12.33□□□□□ -0.44
GAPLINC-203ENST00000581029 ANKRD26Q9UPS8 1709 aa12.33□□□□□ -0.44
GAPLINC-203ENST00000581029 ARHGEF10O15013 1369 aa12.32□□□□□ -0.44
GAPLINC-203ENST00000581029 NRKQ7Z2Y5 1582 aa12.32□□□□□ -0.44
GAPLINC-203ENST00000581029 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.32□□□□□ -0.44
GAPLINC-203ENST00000581029 ABTB2Q8N961 1025 aa12.32□□□□□ -0.44
GAPLINC-203ENST00000581029 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
GAPLINC-203ENST00000581029 KCNH5Q8NCM2 988 aa12.31□□□□□ -0.44
GAPLINC-203ENST00000581029 CFAP53Q96M91 514 aa12.3□□□□□ -0.44
GAPLINC-203ENST00000581029 SOS2Q07890 1332 aaPredicted RBP12.3□□□□□ -0.44
GAPLINC-203ENST00000581029 AATKQ6ZMQ8 1374 aa12.3□□□□□ -0.44
GAPLINC-203ENST00000581029 UBAP1LF5GYI3 381 aa12.29□□□□□ -0.44
GAPLINC-203ENST00000581029 NLRP6P59044 892 aa12.29□□□□□ -0.44
GAPLINC-203ENST00000581029 LRRC59Q96AG4 307 aaKnown RBP12.29□□□□□ -0.44
GAPLINC-203ENST00000581029 KIF24Q5T7B8 1368 aa12.29□□□□□ -0.44
GAPLINC-203ENST00000581029 USP54Q70EL1 1684 aa12.29□□□□□ -0.44
GAPLINC-203ENST00000581029 MIER1Q8N108 512 aa12.28□□□□□ -0.44
GAPLINC-203ENST00000581029 GGNBP2Q9H3C7 697 aa12.28□□□□□ -0.44
GAPLINC-203ENST00000581029 NHSL1Q5SYE7 1610 aa12.28□□□□□ -0.44
GAPLINC-203ENST00000581029 TNS3Q68CZ2 1445 aa12.28□□□□□ -0.44
GAPLINC-203ENST00000581029 AHDC1Q5TGY3 1603 aaPredicted RBP12.27□□□□□ -0.44
GAPLINC-203ENST00000581029 NME9Q86XW9 330 aa12.27□□□□□ -0.45
GAPLINC-203ENST00000581029 OVOS2A0A0J9YW53 1432 aa12.27□□□□□ -0.45
GAPLINC-203ENST00000581029 OVOS2Q6IE36 1432 aa12.27□□□□□ -0.45
GAPLINC-203ENST00000581029 PXDNQ92626 1479 aa12.27□□□□□ -0.45
GAPLINC-203ENST00000581029 PPP2R1AP30153 589 aa12.26□□□□□ -0.45
GAPLINC-203ENST00000581029 SPATA31A3Q5VYP0 1347 aa12.26□□□□□ -0.45
GAPLINC-203ENST00000581029 ROBO1Q9Y6N7 1651 aa12.26□□□□□ -0.45
GAPLINC-203ENST00000581029 TRPM3Q9HCF6 1732 aaPredicted RBP12.25□□□□□ -0.45
GAPLINC-203ENST00000581029 LMOD2Q6P5Q4 547 aa12.25□□□□□ -0.45
GAPLINC-203ENST00000581029 MRS2Q9HD23 443 aa12.25□□□□□ -0.45
GAPLINC-203ENST00000581029 PIK3C2AO00443 1686 aa12.24□□□□□ -0.45
GAPLINC-203ENST00000581029 CNGB1Q14028 1251 aaPredicted RBP12.24□□□□□ -0.45
GAPLINC-203ENST00000581029 NUDCQ9Y266 331 aa12.24□□□□□ -0.45
GAPLINC-203ENST00000581029 ALS2Q96Q42 1657 aa12.23□□□□□ -0.45
GAPLINC-203ENST00000581029 USP19O94966 1318 aa12.23□□□□□ -0.45
GAPLINC-203ENST00000581029 RTL1A6NKG5 1358 aa12.22□□□□□ -0.45
GAPLINC-203ENST00000581029 INSRP06213 1382 aa12.22□□□□□ -0.45
GAPLINC-203ENST00000581029 MTHFSP49914 203 aa12.22□□□□□ -0.45
GAPLINC-203ENST00000581029 HAP1P54257 671 aaPredicted RBP12.22□□□□□ -0.45
GAPLINC-203ENST00000581029 PNNQ9H307 717 aaKnown RBP12.22□□□□□ -0.45
GAPLINC-203ENST00000581029 MED1Q15648 1581 aaPredicted RBP12.22□□□□□ -0.45
GAPLINC-203ENST00000581029 SMG6Q86US8 1419 aaKnown RBP12.21□□□□□ -0.45
GAPLINC-203ENST00000581029 GCP02774 474 aa12.21□□□□□ -0.45
GAPLINC-203ENST00000581029 PIP4K2BP78356 416 aa12.21□□□□□ -0.45
GAPLINC-203ENST00000581029 XPCQ01831 940 aaPredicted RBP12.21□□□□□ -0.45
GAPLINC-203ENST00000581029 SLIT3O75094 1523 aa12.21□□□□□ -0.46
GAPLINC-203ENST00000581029 CDK12Q9NYV4 1490 aaPredicted RBP12.21□□□□□ -0.46
GAPLINC-203ENST00000581029 TNNT2P45379 298 aaPredicted RBP12.2□□□□□ -0.46
GAPLINC-203ENST00000581029 AMPHP49418 695 aa12.2□□□□□ -0.46
GAPLINC-203ENST00000581029 WDR43Q15061 677 aaKnown RBP eCLIP12.2□□□□□ -0.46
GAPLINC-203ENST00000581029 POLKQ9UBT6 870 aa12.2□□□□□ -0.46
GAPLINC-203ENST00000581029 MAP2P11137 1827 aaKnown RBP12.2□□□□□ -0.46
GAPLINC-203ENST00000581029 PHLPP1O60346 1717 aa12.2□□□□□ -0.46
GAPLINC-203ENST00000581029 FLT4P35916 1363 aa12.19□□□□□ -0.46
GAPLINC-203ENST00000581029 PNPLA6Q8IY17 1366 aa12.19□□□□□ -0.46
GAPLINC-203ENST00000581029 ABCC6O95255 1503 aa12.19□□□□□ -0.46
GAPLINC-203ENST00000581029 DIAPH1O60610 1272 aaKnown RBP12.18□□□□□ -0.46
GAPLINC-203ENST00000581029 NUTM2GQ5VZR2 741 aa12.18□□□□□ -0.46
GAPLINC-203ENST00000581029 CPDO75976 1380 aa12.18□□□□□ -0.46
GAPLINC-203ENST00000581029 NEFMP07197 916 aa12.17□□□□□ -0.46
GAPLINC-203ENST00000581029 DDX17Q92841 729 aaKnown RBP12.17□□□□□ -0.46
GAPLINC-203ENST00000581029 ZRANB1Q9UGI0 708 aa12.17□□□□□ -0.46
GAPLINC-203ENST00000581029 PHRF1Q9P1Y6 1649 aaKnown RBP12.17□□□□□ -0.46
GAPLINC-203ENST00000581029 BLMP54132 1417 aaPredicted RBP12.17□□□□□ -0.46
GAPLINC-203ENST00000581029 JCADQ9P266 1359 aa12.17□□□□□ -0.46
GAPLINC-203ENST00000581029 COL22A1Q8NFW1 1626 aaPredicted RBP12.16□□□□□ -0.46
GAPLINC-203ENST00000581029 PPM1GO15355 546 aaPredicted RBP12.16□□□□□ -0.46
GAPLINC-203ENST00000581029 ARHGEF25Q86VW2 580 aa12.16□□□□□ -0.46
GAPLINC-203ENST00000581029 NGEFQ8N5V2 710 aa12.16□□□□□ -0.46
GAPLINC-203ENST00000581029 PNISRQ8TF01 805 aaKnown RBP12.16□□□□□ -0.46
GAPLINC-203ENST00000581029 IP6K1Q92551 441 aa12.16□□□□□ -0.46
GAPLINC-203ENST00000581029 COL16A1Q07092 1604 aaPredicted RBP12.15□□□□□ -0.46
GAPLINC-203ENST00000581029 MAP3K19Q56UN5 1328 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms