RNA–Protein interactions for RNA: ENST00000580886.5

EIF4A1-215, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-215	ENST00000580886	COL16A1	Q07092	1604 aa	Predicted RBP	13.8	□□□□□ -0.2
EIF4A1-215	ENST00000580886	KRT28	Q7Z3Y7	464 aa		13.8	□□□□□ -0.2
EIF4A1-215	ENST00000580886	NGDN	Q8NEJ9	315 aa	Known RBP	13.8	□□□□□ -0.2
EIF4A1-215	ENST00000580886	TMC1	Q8TDI8	760 aa		13.8	□□□□□ -0.2
EIF4A1-215	ENST00000580886	TTC21B	Q7Z4L5	1316 aa		13.8	□□□□□ -0.2
EIF4A1-215	ENST00000580886	TTC21A	Q8NDW8	1320 aa		13.8	□□□□□ -0.2
EIF4A1-215	ENST00000580886	USP31	Q70CQ4	1352 aa		13.8	□□□□□ -0.2
EIF4A1-215	ENST00000580886	ALS2	Q96Q42	1657 aa		13.79	□□□□□ -0.2
EIF4A1-215	ENST00000580886	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.79	□□□□□ -0.2
EIF4A1-215	ENST00000580886	SPATA31A3	Q5VYP0	1347 aa		13.79	□□□□□ -0.2
EIF4A1-215	ENST00000580886	KTN1	Q86UP2	1357 aa	Known RBP	13.79	□□□□□ -0.2
EIF4A1-215	ENST00000580886	USP54	Q70EL1	1684 aa		13.79	□□□□□ -0.2
EIF4A1-215	ENST00000580886	PSME1	Q06323	249 aa		13.78	□□□□□ -0.2
EIF4A1-215	ENST00000580886	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.78	□□□□□ -0.2
EIF4A1-215	ENST00000580886	DDX17	Q92841	729 aa	Known RBP	13.78	□□□□□ -0.2
EIF4A1-215	ENST00000580886	TNS3	Q68CZ2	1445 aa		13.76	□□□□□ -0.21
EIF4A1-215	ENST00000580886	FYB1	O15117	783 aa		13.76	□□□□□ -0.21
EIF4A1-215	ENST00000580886	PIP4K2B	P78356	416 aa		13.76	□□□□□ -0.21
EIF4A1-215	ENST00000580886	LRRC59	Q96AG4	307 aa	Known RBP	13.76	□□□□□ -0.21
EIF4A1-215	ENST00000580886	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.75	□□□□□ -0.21
EIF4A1-215	ENST00000580886	MED1	Q15648	1581 aa	Predicted RBP	13.75	□□□□□ -0.21
EIF4A1-215	ENST00000580886	NSD3	Q9BZ95	1437 aa		13.75	□□□□□ -0.21
EIF4A1-215	ENST00000580886	OVOS2	A0A0J9YW53	1432 aa		13.74	□□□□□ -0.21
EIF4A1-215	ENST00000580886	OVOS2	Q6IE36	1432 aa		13.74	□□□□□ -0.21
EIF4A1-215	ENST00000580886	ARHGEF10	O15013	1369 aa		13.74	□□□□□ -0.21
EIF4A1-215	ENST00000580886	NSD2	O96028	1365 aa		13.74	□□□□□ -0.21
EIF4A1-215	ENST00000580886	USP19	O94966	1318 aa		13.74	□□□□□ -0.21
EIF4A1-215	ENST00000580886	PHLPP1	O60346	1717 aa		13.74	□□□□□ -0.21
EIF4A1-215	ENST00000580886	PIK3C2A	O00443	1686 aa		13.74	□□□□□ -0.21
EIF4A1-215	ENST00000580886	MARF1	Q9Y4F3	1742 aa	Known RBP	13.73	□□□□□ -0.21
EIF4A1-215	ENST00000580886	PNPLA6	Q8IY17	1366 aa		13.73	□□□□□ -0.21
EIF4A1-215	ENST00000580886	HSPA1L	P34931	641 aa		13.73	□□□□□ -0.21
EIF4A1-215	ENST00000580886	DDX10	Q13206	875 aa	Known RBP	13.73	□□□□□ -0.21
EIF4A1-215	ENST00000580886	SCAF1	Q9H7N4	1312 aa	Known RBP	13.72	□□□□□ -0.21
EIF4A1-215	ENST00000580886	XPC	Q01831	940 aa	Predicted RBP	13.72	□□□□□ -0.21
EIF4A1-215	ENST00000580886	POLR3GL	Q9BT43	218 aa		13.72	□□□□□ -0.21
EIF4A1-215	ENST00000580886	SLIT3	O75094	1523 aa		13.72	□□□□□ -0.21
EIF4A1-215	ENST00000580886	CRYBG1	Q9Y4K1	1723 aa		13.72	□□□□□ -0.21
EIF4A1-215	ENST00000580886	CGNL1	Q0VF96	1302 aa		13.71	□□□□□ -0.21
EIF4A1-215	ENST00000580886	SHPRH	Q149N8	1683 aa		13.71	□□□□□ -0.21
EIF4A1-215	ENST00000580886	JCAD	Q9P266	1359 aa		13.71	□□□□□ -0.22
EIF4A1-215	ENST00000580886	NME9	Q86XW9	330 aa		13.7	□□□□□ -0.22
EIF4A1-215	ENST00000580886	KNSTRN	Q9Y448	316 aa		13.7	□□□□□ -0.22
EIF4A1-215	ENST00000580886	ABTB2	Q8N961	1025 aa		13.69	□□□□□ -0.22
EIF4A1-215	ENST00000580886	NLRP13	Q86W25	1043 aa		13.68	□□□□□ -0.22
EIF4A1-215	ENST00000580886	ZRANB1	Q9UGI0	708 aa		13.68	□□□□□ -0.22
EIF4A1-215	ENST00000580886	NFAT5	O94916	1531 aa		13.68	□□□□□ -0.22
EIF4A1-215	ENST00000580886	AATK	Q6ZMQ8	1374 aa		13.68	□□□□□ -0.22
EIF4A1-215	ENST00000580886	ANKRD26	Q9UPS8	1709 aa		13.67	□□□□□ -0.22
EIF4A1-215	ENST00000580886	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
EIF4A1-215	ENST00000580886	CPD	O75976	1380 aa		13.67	□□□□□ -0.22
EIF4A1-215	ENST00000580886	PARD3	Q8TEW0	1356 aa		13.67	□□□□□ -0.22
EIF4A1-215	ENST00000580886	KIF20B	Q96Q89	1820 aa		13.67	□□□□□ -0.22
EIF4A1-215	ENST00000580886	SPATA31A6	Q5VVP1	1343 aa		13.66	□□□□□ -0.22
EIF4A1-215	ENST00000580886	NLRP6	P59044	892 aa		13.66	□□□□□ -0.22
EIF4A1-215	ENST00000580886	ABCA3	Q99758	1704 aa		13.65	□□□□□ -0.22
EIF4A1-215	ENST00000580886	PAK3	O75914	559 aa	Predicted RBP	13.65	□□□□□ -0.22
EIF4A1-215	ENST00000580886	GC	P02774	474 aa		13.65	□□□□□ -0.22
EIF4A1-215	ENST00000580886	GGNBP2	Q9H3C7	697 aa		13.65	□□□□□ -0.22
EIF4A1-215	ENST00000580886	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.64	□□□□□ -0.23
EIF4A1-215	ENST00000580886	KCNH5	Q8NCM2	988 aa		13.64	□□□□□ -0.23
EIF4A1-215	ENST00000580886	COG3	Q96JB2	828 aa		13.64	□□□□□ -0.23
EIF4A1-215	ENST00000580886	SMG6	Q86US8	1419 aa	Known RBP	13.64	□□□□□ -0.23
EIF4A1-215	ENST00000580886	INSR	P06213	1382 aa		13.63	□□□□□ -0.23
EIF4A1-215	ENST00000580886	KIF24	Q5T7B8	1368 aa		13.63	□□□□□ -0.23
EIF4A1-215	ENST00000580886	ARHGEF25	Q86VW2	580 aa		13.63	□□□□□ -0.23
EIF4A1-215	ENST00000580886	ABCC6	O95255	1503 aa		13.63	□□□□□ -0.23
EIF4A1-215	ENST00000580886	RALBP1	Q15311	655 aa		13.61	□□□□□ -0.23
EIF4A1-215	ENST00000580886	NUTM2G	Q5VZR2	741 aa		13.61	□□□□□ -0.23
EIF4A1-215	ENST00000580886	CABLES1	Q8TDN4	633 aa		13.61	□□□□□ -0.23
EIF4A1-215	ENST00000580886	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.61	□□□□□ -0.23
EIF4A1-215	ENST00000580886	LRP6	O75581	1613 aa		13.61	□□□□□ -0.23
EIF4A1-215	ENST00000580886	COL18A1	P39060	1754 aa		13.6	□□□□□ -0.23
EIF4A1-215	ENST00000580886	POLK	Q9UBT6	870 aa		13.6	□□□□□ -0.23
EIF4A1-215	ENST00000580886	MORC1	Q86VD1	984 aa		13.59	□□□□□ -0.23
EIF4A1-215	ENST00000580886	LMO7	Q8WWI1	1683 aa		13.59	□□□□□ -0.23
EIF4A1-215	ENST00000580886	CC2D1B	Q5T0F9	858 aa	Known RBP	13.58	□□□□□ -0.24
EIF4A1-215	ENST00000580886	LMOD2	Q6P5Q4	547 aa		13.58	□□□□□ -0.24
EIF4A1-215	ENST00000580886	MAP3K19	Q56UN5	1328 aa		13.58	□□□□□ -0.24
EIF4A1-215	ENST00000580886	RTL1	A6NKG5	1358 aa		13.58	□□□□□ -0.24
EIF4A1-215	ENST00000580886	FAM83G	A6ND36	823 aa		13.57	□□□□□ -0.24
EIF4A1-215	ENST00000580886	FBLN1	P23142	703 aa		13.57	□□□□□ -0.24
EIF4A1-215	ENST00000580886	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.57	□□□□□ -0.24
EIF4A1-215	ENST00000580886	SLIT2	O94813	1529 aa		13.57	□□□□□ -0.24
EIF4A1-215	ENST00000580886	KIAA0232	Q92628	1395 aa		13.57	□□□□□ -0.24
EIF4A1-215	ENST00000580886	PPP2R1A	P30153	589 aa		13.56	□□□□□ -0.24
EIF4A1-215	ENST00000580886	IP6K1	Q92551	441 aa		13.56	□□□□□ -0.24
EIF4A1-215	ENST00000580886	PEAK1	Q9H792	1746 aa		13.56	□□□□□ -0.24
EIF4A1-215	ENST00000580886	BLM	P54132	1417 aa	Predicted RBP	13.55	□□□□□ -0.24
EIF4A1-215	ENST00000580886	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.55	□□□□□ -0.24
EIF4A1-215	ENST00000580886	CAMTA1	Q9Y6Y1	1673 aa		13.54	□□□□□ -0.24
EIF4A1-215	ENST00000580886	COL14A1	Q05707	1796 aa	Known RBP	13.54	□□□□□ -0.24
EIF4A1-215	ENST00000580886	AXIN2	Q9Y2T1	843 aa		13.54	□□□□□ -0.24
EIF4A1-215	ENST00000580886	COL3A1	P02461	1466 aa	Predicted RBP	13.54	□□□□□ -0.24
EIF4A1-215	ENST00000580886	MAP2	P11137	1827 aa	Known RBP	13.53	□□□□□ -0.24
EIF4A1-215	ENST00000580886	HOXC9	P31274	260 aa		13.53	□□□□□ -0.24
EIF4A1-215	ENST00000580886	MTHFS	P49914	203 aa		13.53	□□□□□ -0.24
EIF4A1-215	ENST00000580886	ZC3H6	P61129	1189 aa	Known RBP	13.53	□□□□□ -0.24
EIF4A1-215	ENST00000580886	RRS1	Q15050	365 aa	Known RBP	13.53	□□□□□ -0.24
EIF4A1-215	ENST00000580886	DIEXF	Q68CQ4	756 aa	Known RBP	13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 190.5 ms