RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 PPP1R1BQ9UD71 204 aaPredicted RBP5.16□□□□□ -1.58
CDH19-204ENST00000579658 R3HDM1Q15032 1099 aaKnown RBP5.15□□□□□ -1.58
CDH19-204ENST00000579658 U3KPZ7 1027 aaPredicted RBP5.15□□□□□ -1.58
CDH19-204ENST00000579658 ANKRD50Q9ULJ7 1429 aa5.15□□□□□ -1.58
CDH19-204ENST00000579658 ARHGEF10O15013 1369 aa5.15□□□□□ -1.59
CDH19-204ENST00000579658 KNDC1Q76NI1 1749 aa5.15□□□□□ -1.59
CDH19-204ENST00000579658 FMN2Q9NZ56 1722 aa5.15□□□□□ -1.59
CDH19-204ENST00000579658 PLEKHG5O94827 1062 aa5.14□□□□□ -1.59
CDH19-204ENST00000579658 ZNF784Q8NCA9 323 aaPredicted RBP5.14□□□□□ -1.59
CDH19-204ENST00000579658 OTUD5Q96G74 571 aa5.14□□□□□ -1.59
CDH19-204ENST00000579658 KIF1BO60333 1816 aa5.14□□□□□ -1.59
CDH19-204ENST00000579658 METP08581 1390 aa5.14□□□□□ -1.59
CDH19-204ENST00000579658 KCNQ2O43526 872 aa5.14□□□□□ -1.59
CDH19-204ENST00000579658 CHGAP10645 457 aaKnown RBP5.14□□□□□ -1.59
CDH19-204ENST00000579658 TNS3Q68CZ2 1445 aa5.14□□□□□ -1.59
CDH19-204ENST00000579658 SBNO1A3KN83 1393 aa5.14□□□□□ -1.59
CDH19-204ENST00000579658 SPATA31A3Q5VYP0 1347 aa5.14□□□□□ -1.59
CDH19-204ENST00000579658 PSME1Q06323 249 aa5.13□□□□□ -1.59
CDH19-204ENST00000579658 IFNLR1Q8IU57 520 aaPredicted RBP5.13□□□□□ -1.59
CDH19-204ENST00000579658 DDX17Q92841 729 aaKnown RBP5.13□□□□□ -1.59
CDH19-204ENST00000579658 CASZ1Q86V15 1759 aa5.13□□□□□ -1.59
CDH19-204ENST00000579658 EN1Q05925 392 aaPredicted RBP5.13□□□□□ -1.59
CDH19-204ENST00000579658 FAM196AQ6ZSG2 479 aa5.13□□□□□ -1.59
CDH19-204ENST00000579658 CAMKK2Q96RR4 588 aa5.13□□□□□ -1.59
CDH19-204ENST00000579658 DLC1Q96QB1 1528 aa5.13□□□□□ -1.59
CDH19-204ENST00000579658 MYCNP04198 464 aaPredicted RBP5.12□□□□□ -1.59
CDH19-204ENST00000579658 ORAI2Q96SN7 254 aa5.12□□□□□ -1.59
CDH19-204ENST00000579658 TSHZ2Q9NRE2 1034 aa5.12□□□□□ -1.59
CDH19-204ENST00000579658 RPGRIP1LQ68CZ1 1315 aa5.12□□□□□ -1.59
CDH19-204ENST00000579658 TECPR2O15040 1411 aa5.12□□□□□ -1.59
CDH19-204ENST00000579658 FAM50AQ14320 339 aaKnown RBP5.11□□□□□ -1.59
CDH19-204ENST00000579658 TMEM132AQ24JP5 1023 aa5.11□□□□□ -1.59
CDH19-204ENST00000579658 CCDC9Q9Y3X0 531 aaKnown RBP5.11□□□□□ -1.59
CDH19-204ENST00000579658 MAP3K5Q99683 1374 aa5.11□□□□□ -1.59
CDH19-204ENST00000579658 NRKQ7Z2Y5 1582 aa5.11□□□□□ -1.59
CDH19-204ENST00000579658 CAMTA1Q9Y6Y1 1673 aa5.11□□□□□ -1.59
CDH19-204ENST00000579658 ROBO2Q9HCK4 1378 aa5.11□□□□□ -1.59
CDH19-204ENST00000579658 GIGYF1O75420 1035 aaPredicted RBP5.11□□□□□ -1.59
CDH19-204ENST00000579658 ESCO1Q5FWF5 840 aa5.11□□□□□ -1.59
CDH19-204ENST00000579658 PAXIP1Q6ZW49 1069 aaPredicted RBP5.11□□□□□ -1.59
CDH19-204ENST00000579658 HOMEZQ8IX15 550 aa5.11□□□□□ -1.59
CDH19-204ENST00000579658 CHIC2Q9UKJ5 165 aa5.11□□□□□ -1.59
CDH19-204ENST00000579658 IFT172Q9UG01 1749 aa5.11□□□□□ -1.59
CDH19-204ENST00000579658 ROCK1Q13464 1354 aa5.11□□□□□ -1.59
CDH19-204ENST00000579658 VGFO15240 615 aaPredicted RBP5.1□□□□□ -1.59
CDH19-204ENST00000579658 ITGAEP38570 1179 aa5.1□□□□□ -1.59
CDH19-204ENST00000579658 PCGF6Q9BYE7 350 aa5.1□□□□□ -1.59
CDH19-204ENST00000579658 NAIPQ13075 1403 aa5.1□□□□□ -1.59
CDH19-204ENST00000579658 A0A0G2JS52 829 aa5.1□□□□□ -1.59
CDH19-204ENST00000579658 MYT1Q01538 1121 aa5.1□□□□□ -1.59
CDH19-204ENST00000579658 EZH2Q15910 746 aaKnown RBP5.1□□□□□ -1.59
CDH19-204ENST00000579658 SPATA31A5Q5VU36 1347 aa5.1□□□□□ -1.59
CDH19-204ENST00000579658 SPATA31A7Q8IWB4 1347 aa5.1□□□□□ -1.59
CDH19-204ENST00000579658 PPLO60437 1756 aa5.1□□□□□ -1.59
CDH19-204ENST00000579658 MYOM1P52179 1685 aa5.1□□□□□ -1.59
CDH19-204ENST00000579658 NRXN1Q9ULB1 1477 aa5.09□□□□□ -1.59
CDH19-204ENST00000579658 ZNF326Q5BKZ1 582 aaKnown RBP5.09□□□□□ -1.59
CDH19-204ENST00000579658 CRYBG1Q9Y4K1 1723 aa5.09□□□□□ -1.6
CDH19-204ENST00000579658 CLTCL1P53675 1640 aa5.09□□□□□ -1.6
CDH19-204ENST00000579658 APBA3O96018 575 aa5.09□□□□□ -1.6
CDH19-204ENST00000579658 CFAP44Q96MT7 982 aa5.09□□□□□ -1.6
CDH19-204ENST00000579658 ALS2Q96Q42 1657 aa5.08□□□□□ -1.6
CDH19-204ENST00000579658 TRPM3Q9HCF6 1732 aaPredicted RBP5.08□□□□□ -1.6
CDH19-204ENST00000579658 PARP4Q9UKK3 1724 aaKnown RBP5.08□□□□□ -1.6
CDH19-204ENST00000579658 EIF3AQ14152 1382 aaKnown RBP5.08□□□□□ -1.6
CDH19-204ENST00000579658 ANKARQ7Z5J8 1434 aa5.08□□□□□ -1.6
CDH19-204ENST00000579658 FOXO3O43524 673 aa5.08□□□□□ -1.6
CDH19-204ENST00000579658 FAM98CQ17RN3 349 aaKnown RBP5.08□□□□□ -1.6
CDH19-204ENST00000579658 KRT28Q7Z3Y7 464 aa5.08□□□□□ -1.6
CDH19-204ENST00000579658 CDAN1Q8IWY9 1227 aa5.08□□□□□ -1.6
CDH19-204ENST00000579658 SIRT1Q96EB6 747 aa5.08□□□□□ -1.6
CDH19-204ENST00000579658 FAM83GA6ND36 823 aa5.08□□□□□ -1.6
CDH19-204ENST00000579658 POTEIP0CG38 1075 aa5.07□□□□□ -1.6
CDH19-204ENST00000579658 VASPP50552 380 aaPredicted RBP5.07□□□□□ -1.6
CDH19-204ENST00000579658 MMRN1Q13201 1228 aa5.07□□□□□ -1.6
CDH19-204ENST00000579658 BARGINQ6ZT62 677 aa5.07□□□□□ -1.6
CDH19-204ENST00000579658 REM2Q8IYK8 340 aaPredicted RBP5.07□□□□□ -1.6
CDH19-204ENST00000579658 PLSCR1O15162 318 aa5.06□□□□□ -1.6
CDH19-204ENST00000579658 ABCC11Q96J66 1382 aa5.06□□□□□ -1.6
CDH19-204ENST00000579658 COL24A1Q17RW2 1714 aa5.06□□□□□ -1.6
CDH19-204ENST00000579658 QSER1Q2KHR3 1735 aa5.06□□□□□ -1.6
CDH19-204ENST00000579658 SHANK3Q9BYB0 1731 aa5.06□□□□□ -1.6
CDH19-204ENST00000579658 TRIM37O94972 964 aa5.06□□□□□ -1.6
CDH19-204ENST00000579658 BBXQ8WY36 941 aaPredicted RBP5.06□□□□□ -1.6
CDH19-204ENST00000579658 PHF8Q9UPP1 1060 aa5.06□□□□□ -1.6
CDH19-204ENST00000579658 THRAP3Q9Y2W1 955 aaKnown RBP5.06□□□□□ -1.6
CDH19-204ENST00000579658 SPATA31A1Q5TZJ5 1347 aa5.06□□□□□ -1.6
CDH19-204ENST00000579658 NUP155O75694 1391 aa5.06□□□□□ -1.6
CDH19-204ENST00000579658 DHX57Q6P158 1386 aaKnown RBP5.06□□□□□ -1.6
CDH19-204ENST00000579658 BCL9O00512 1426 aa5.05□□□□□ -1.6
CDH19-204ENST00000579658 PDE3BQ13370 1112 aa5.05□□□□□ -1.6
CDH19-204ENST00000579658 AATKQ6ZMQ8 1374 aa5.05□□□□□ -1.6
CDH19-204ENST00000579658 SBF2Q86WG5 1849 aa5.05□□□□□ -1.6
CDH19-204ENST00000579658 PEAK1Q9H792 1746 aa5.05□□□□□ -1.6
CDH19-204ENST00000579658 BTG4Q9NY30 223 aa5.05□□□□□ -1.6
CDH19-204ENST00000579658 ATP7BP35670 1465 aa5.05□□□□□ -1.6
CDH19-204ENST00000579658 OVOS2A0A0G2JMS6 1433 aa5.05□□□□□ -1.6
CDH19-204ENST00000579658 OVOS2A0A0J9YW53 1432 aa5.05□□□□□ -1.6
CDH19-204ENST00000579658 OVOS2Q6IE36 1432 aa5.05□□□□□ -1.6
CDH19-204ENST00000579658 EP400Q96L91 3159 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms