RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 TPM4P67936 248 aa12.51□□□□□ -0.41
MSI2-209ENST00000579483 ABCC2Q92887 1545 aa12.51□□□□□ -0.41
MSI2-209ENST00000579483 SYAP1Q96A49 352 aaPredicted RBP12.51□□□□□ -0.41
MSI2-209ENST00000579483 TMOD3Q9NYL9 352 aa12.51□□□□□ -0.41
MSI2-209ENST00000579483 HDGFL1Q5TGJ6 251 aa12.5□□□□□ -0.41
MSI2-209ENST00000579483 NCOA1Q15788 1441 aa12.5□□□□□ -0.41
MSI2-209ENST00000579483 RAD21O60216 631 aa12.5□□□□□ -0.41
MSI2-209ENST00000579483 REC8O95072 547 aa12.5□□□□□ -0.41
MSI2-209ENST00000579483 ERC1Q8IUD2 1116 aa12.5□□□□□ -0.41
MSI2-209ENST00000579483 CENPQQ7L2Z9 268 aaPredicted RBP12.5□□□□□ -0.41
MSI2-209ENST00000579483 PTPN23Q9H3S7 1636 aa12.49□□□□□ -0.41
MSI2-209ENST00000579483 PPP2R1AP30153 589 aa12.49□□□□□ -0.41
MSI2-209ENST00000579483 NEUROD6Q96NK8 337 aa12.49□□□□□ -0.41
MSI2-209ENST00000579483 TCP11L2Q8N4U5 519 aa12.49□□□□□ -0.41
MSI2-209ENST00000579483 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.49□□□□□ -0.41
MSI2-209ENST00000579483 NAIPQ13075 1403 aa12.49□□□□□ -0.41
MSI2-209ENST00000579483 NINLQ9Y2I6 1382 aa12.49□□□□□ -0.41
MSI2-209ENST00000579483 DHX16O60231 1041 aaKnown RBP12.49□□□□□ -0.41
MSI2-209ENST00000579483 FCHSD2O94868 740 aa12.49□□□□□ -0.41
MSI2-209ENST00000579483 WAPLQ7Z5K2 1190 aa12.49□□□□□ -0.41
MSI2-209ENST00000579483 SLC3A2P08195 630 aaKnown RBP12.48□□□□□ -0.41
MSI2-209ENST00000579483 TRIM29Q14134 588 aa12.48□□□□□ -0.41
MSI2-209ENST00000579483 ZPR1O75312 459 aa12.48□□□□□ -0.41
MSI2-209ENST00000579483 CT47B1P0C2W7 299 aaPredicted RBP12.48□□□□□ -0.41
MSI2-209ENST00000579483 CCAR1Q8IX12 1150 aaKnown RBP12.47□□□□□ -0.41
MSI2-209ENST00000579483 FAM184AQ8NB25 1140 aa12.47□□□□□ -0.41
MSI2-209ENST00000579483 FAM177BA6PVY3 158 aa12.47□□□□□ -0.41
MSI2-209ENST00000579483 CLASRPQ8N2M8 674 aaKnown RBP12.47□□□□□ -0.41
MSI2-209ENST00000579483 CNNM1Q9NRU3 951 aa12.47□□□□□ -0.41
MSI2-209ENST00000579483 DUOX2Q9NRD8 1548 aa12.47□□□□□ -0.41
MSI2-209ENST00000579483 CCDC27Q2M243 656 aa12.47□□□□□ -0.41
MSI2-209ENST00000579483 SF3A1Q15459 793 aaKnown RBP12.47□□□□□ -0.41
MSI2-209ENST00000579483 GPATCH8Q9UKJ3 1502 aaKnown RBP12.47□□□□□ -0.41
MSI2-209ENST00000579483 TEX13AQ9BXU3 409 aaPredicted RBP12.46□□□□□ -0.41
MSI2-209ENST00000579483 UHRF1BP1Q6BDS2 1440 aa12.46□□□□□ -0.41
MSI2-209ENST00000579483 MPHOSPH8Q99549 860 aa12.46□□□□□ -0.41
MSI2-209ENST00000579483 C19orf44Q9H6X5 657 aa12.46□□□□□ -0.41
MSI2-209ENST00000579483 BTBD11A6QL63 1104 aa12.46□□□□□ -0.42
MSI2-209ENST00000579483 WDHD1O75717 1129 aaPredicted RBP12.46□□□□□ -0.42
MSI2-209ENST00000579483 TWISTNBQ3B726 338 aaPredicted RBP12.46□□□□□ -0.42
MSI2-209ENST00000579483 C14orf93Q9H972 538 aaKnown RBP12.46□□□□□ -0.42
MSI2-209ENST00000579483 ATP6V1DQ9Y5K8 247 aa12.46□□□□□ -0.42
MSI2-209ENST00000579483 GNAT3A8MTJ3 354 aa12.45□□□□□ -0.42
MSI2-209ENST00000579483 CPLX1O14810 134 aa12.45□□□□□ -0.42
MSI2-209ENST00000579483 ZNF428Q96B54 188 aa12.45□□□□□ -0.42
MSI2-209ENST00000579483 H3BQV1 296 aa12.45□□□□□ -0.42
MSI2-209ENST00000579483 HSP90AB3PQ58FF7 597 aa12.45□□□□□ -0.42
MSI2-209ENST00000579483 IFFO2Q5TF58 517 aa12.45□□□□□ -0.42
MSI2-209ENST00000579483 COG6Q9Y2V7 657 aa12.45□□□□□ -0.42
MSI2-209ENST00000579483 CCT4P50991 539 aaKnown RBP12.45□□□□□ -0.42
MSI2-209ENST00000579483 CCDC158Q5M9N0 1113 aa12.44□□□□□ -0.42
MSI2-209ENST00000579483 RALYLQ86SE5 291 aaKnown RBP12.44□□□□□ -0.42
MSI2-209ENST00000579483 PLIN1O60240 522 aa12.44□□□□□ -0.42
MSI2-209ENST00000579483 WASHC4Q2M389 1173 aa12.44□□□□□ -0.42
MSI2-209ENST00000579483 LRRC59Q96AG4 307 aaKnown RBP12.44□□□□□ -0.42
MSI2-209ENST00000579483 HIP1O00291 1037 aa12.43□□□□□ -0.42
MSI2-209ENST00000579483 DNTTIP2Q5QJE6 756 aaKnown RBP12.43□□□□□ -0.42
MSI2-209ENST00000579483 LMTK3Q96Q04 1460 aa12.43□□□□□ -0.42
MSI2-209ENST00000579483 TTC21BQ7Z4L5 1316 aa12.43□□□□□ -0.42
MSI2-209ENST00000579483 CCDC47Q96A33 483 aaKnown RBP12.43□□□□□ -0.42
MSI2-209ENST00000579483 TTC21AQ8NDW8 1320 aa12.43□□□□□ -0.42
MSI2-209ENST00000579483 RRP1P56182 461 aaKnown RBP12.43□□□□□ -0.42
MSI2-209ENST00000579483 CCDC57Q2TAC2 916 aa12.43□□□□□ -0.42
MSI2-209ENST00000579483 SART3Q15020 963 aaKnown RBP12.43□□□□□ -0.42
MSI2-209ENST00000579483 SRCIN1Q9C0H9 1055 aa12.43□□□□□ -0.42
MSI2-209ENST00000579483 RRS1Q15050 365 aaKnown RBP12.42□□□□□ -0.42
MSI2-209ENST00000579483 CCDC43Q96MW1 224 aaKnown RBP12.42□□□□□ -0.42
MSI2-209ENST00000579483 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.42□□□□□ -0.425e-14■□□□□ 10.4
MSI2-209ENST00000579483 NOS1P29475 1434 aa12.42□□□□□ -0.42
MSI2-209ENST00000579483 CFAP74Q9C0B2 1584 aa12.42□□□□□ -0.42
MSI2-209ENST00000579483 NFXL1Q6ZNB6 911 aa12.42□□□□□ -0.42
MSI2-209ENST00000579483 WDR63Q8IWG1 891 aa12.42□□□□□ -0.42
MSI2-209ENST00000579483 TMOD2Q9NZR1 351 aa12.42□□□□□ -0.42
MSI2-209ENST00000579483 ITSN2Q9NZM3 1697 aa12.42□□□□□ -0.42
MSI2-209ENST00000579483 ADAMTS8Q9UP79 889 aa12.42□□□□□ -0.42
MSI2-209ENST00000579483 KIAA0556O60303 1618 aa12.41□□□□□ -0.42
MSI2-209ENST00000579483 A0A087WZG4 1122 aa12.41□□□□□ -0.42
MSI2-209ENST00000579483 IGHMBP2P38935 993 aaKnown RBP12.41□□□□□ -0.42
MSI2-209ENST00000579483 RIMS2Q9UQ26 1411 aa12.41□□□□□ -0.42
MSI2-209ENST00000579483 NSD2O96028 1365 aa12.41□□□□□ -0.42
MSI2-209ENST00000579483 NSD3Q9BZ95 1437 aa12.41□□□□□ -0.42
MSI2-209ENST00000579483 GNAI2P04899 355 aa12.41□□□□□ -0.42
MSI2-209ENST00000579483 DRC7Q8IY82 874 aa12.41□□□□□ -0.42
MSI2-209ENST00000579483 ZSCAN25Q6NSZ9 544 aa12.4□□□□□ -0.42
MSI2-209ENST00000579483 ZMYM3Q14202 1370 aa12.4□□□□□ -0.42
MSI2-209ENST00000579483 ATP10AO60312 1499 aa12.4□□□□□ -0.42
MSI2-209ENST00000579483 NUP153P49790 1475 aaKnown RBP12.4□□□□□ -0.42
MSI2-209ENST00000579483 NCBP3Q53F19 620 aaKnown RBP12.4□□□□□ -0.42
MSI2-209ENST00000579483 ADGRF5Q8IZF2 1346 aa12.4□□□□□ -0.42
MSI2-209ENST00000579483 BCL11BQ9C0K0 894 aaPredicted RBP12.4□□□□□ -0.42
MSI2-209ENST00000579483 NFE2L2Q16236 605 aa12.4□□□□□ -0.42
MSI2-209ENST00000579483 NBPF8Q3BBV2 869 aa12.4□□□□□ -0.42
MSI2-209ENST00000579483 IFNL2Q8IZJ0 200 aa12.4□□□□□ -0.42
MSI2-209ENST00000579483 SMARCC1Q92922 1105 aaPredicted RBP12.4□□□□□ -0.42
MSI2-209ENST00000579483 AK7Q96M32 723 aa12.4□□□□□ -0.42
MSI2-209ENST00000579483 SURF6O75683 361 aaKnown RBP12.39□□□□□ -0.43
MSI2-209ENST00000579483 SLC4A2P04920 1241 aa12.39□□□□□ -0.43
MSI2-209ENST00000579483 XBP1P17861 261 aa12.39□□□□□ -0.43
MSI2-209ENST00000579483 SAFBQ15424 915 aaKnown RBP eCLIP12.39□□□□□ -0.43
MSI2-209ENST00000579483 NBPF14Q5TI25 921 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms