RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 HSPA5P11021 654 aaKnown RBP14.04□□□□□ -0.16
MKS1-208ENST00000579358 LMOD2Q6P5Q4 547 aa14.04□□□□□ -0.16
MKS1-208ENST00000579358 CD163L1Q9NR16 1453 aa14.03□□□□□ -0.16
MKS1-208ENST00000579358 HDGFL2Q7Z4V5 671 aaPredicted RBP14.02□□□□□ -0.17
MKS1-208ENST00000579358 TMC1Q8TDI8 760 aa14.02□□□□□ -0.17
MKS1-208ENST00000579358 KTN1Q86UP2 1357 aaKnown RBP14.01□□□□□ -0.17
MKS1-208ENST00000579358 TTC21AQ8NDW8 1320 aa14.01□□□□□ -0.17
MKS1-208ENST00000579358 ADAMTS2O95450 1211 aa14.01□□□□□ -0.17
MKS1-208ENST00000579358 SLC12A5Q9H2X9 1139 aa14.01□□□□□ -0.17
MKS1-208ENST00000579358 TERF2IPQ9NYB0 399 aa14.01□□□□□ -0.17
MKS1-208ENST00000579358 RGS17Q9UGC6 210 aaPredicted RBP14.01□□□□□ -0.17
MKS1-208ENST00000579358 A0A1W2PP64 1363 aa14□□□□□ -0.17
MKS1-208ENST00000579358 USP19O94966 1318 aa14□□□□□ -0.17
MKS1-208ENST00000579358 HAP1P54257 671 aaPredicted RBP14□□□□□ -0.17
MKS1-208ENST00000579358 ZNF772Q68DY9 489 aaPredicted RBP14□□□□□ -0.17
MKS1-208ENST00000579358 ABTB2Q8N961 1025 aa14□□□□□ -0.17
MKS1-208ENST00000579358 C8orf37Q96NL8 207 aa14□□□□□ -0.17
MKS1-208ENST00000579358 NRKQ7Z2Y5 1582 aa14□□□□□ -0.17
MKS1-208ENST00000579358 EDC4Q6P2E9 1401 aaKnown RBP13.99□□□□□ -0.17
MKS1-208ENST00000579358 ANKRD36BQ8N2N9 1353 aa13.99□□□□□ -0.17
MKS1-208ENST00000579358 TTC21BQ7Z4L5 1316 aa13.99□□□□□ -0.17
MKS1-208ENST00000579358 NLRP13Q86W25 1043 aa13.99□□□□□ -0.17
MKS1-208ENST00000579358 CABLES1Q8TDN4 633 aa13.99□□□□□ -0.17
MKS1-208ENST00000579358 AFF2P51816 1311 aa13.98□□□□□ -0.17
MKS1-208ENST00000579358 FNBP4Q8N3X1 1017 aaPredicted RBP13.98□□□□□ -0.17
MKS1-208ENST00000579358 AKAP12Q02952 1782 aa13.98□□□□□ -0.17
MKS1-208ENST00000579358 ABCA3Q99758 1704 aa13.98□□□□□ -0.17
MKS1-208ENST00000579358 NGLY1Q96IV0 654 aa13.97□□□□□ -0.17
MKS1-208ENST00000579358 MON2Q7Z3U7 1717 aa13.97□□□□□ -0.17
MKS1-208ENST00000579358 CRYBG1Q9Y4K1 1723 aa13.96□□□□□ -0.17
MKS1-208ENST00000579358 USP31Q70CQ4 1352 aa13.96□□□□□ -0.18
MKS1-208ENST00000579358 SLIT3O75094 1523 aa13.95□□□□□ -0.18
MKS1-208ENST00000579358 SLIT2O94813 1529 aa13.95□□□□□ -0.18
MKS1-208ENST00000579358 NLRP6P59044 892 aa13.95□□□□□ -0.18
MKS1-208ENST00000579358 NUTM2GQ5VZR2 741 aa13.95□□□□□ -0.18
MKS1-208ENST00000579358 POTEAQ6S8J7 498 aa13.95□□□□□ -0.18
MKS1-208ENST00000579358 PIK3C2AO00443 1686 aa13.95□□□□□ -0.18
MKS1-208ENST00000579358 PHRF1Q9P1Y6 1649 aaKnown RBP13.94□□□□□ -0.18
MKS1-208ENST00000579358 PLEKHG5O94827 1062 aa13.94□□□□□ -0.18
MKS1-208ENST00000579358 USP21Q9UK80 565 aa13.94□□□□□ -0.18
MKS1-208ENST00000579358 CPDO75976 1380 aa13.94□□□□□ -0.18
MKS1-208ENST00000579358 BCL9LQ86UU0 1499 aa13.93□□□□□ -0.18
MKS1-208ENST00000579358 GCP02774 474 aa13.93□□□□□ -0.18
MKS1-208ENST00000579358 MARF1Q9Y4F3 1742 aaKnown RBP13.93□□□□□ -0.18
MKS1-208ENST00000579358 MYOM1P52179 1685 aa13.92□□□□□ -0.18
MKS1-208ENST00000579358 FAM83GA6ND36 823 aa13.92□□□□□ -0.18
MKS1-208ENST00000579358 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.92□□□□□ -0.18
MKS1-208ENST00000579358 KCNH5Q8NCM2 988 aa13.92□□□□□ -0.18
MKS1-208ENST00000579358 PRDM11Q9NQV5 511 aa13.92□□□□□ -0.18
MKS1-208ENST00000579358 KIAA0232Q92628 1395 aa13.92□□□□□ -0.18
MKS1-208ENST00000579358 OVOS2A0A0J9YW53 1432 aa13.91□□□□□ -0.18
MKS1-208ENST00000579358 ATRNO75882 1429 aa13.91□□□□□ -0.18
MKS1-208ENST00000579358 OVOS2Q6IE36 1432 aa13.91□□□□□ -0.18
MKS1-208ENST00000579358 NME9Q86XW9 330 aa13.91□□□□□ -0.18
MKS1-208ENST00000579358 UNC5CLQ8IV45 518 aa13.91□□□□□ -0.18
MKS1-208ENST00000579358 TRPC5Q9UL62 973 aaPredicted RBP13.91□□□□□ -0.18
MKS1-208ENST00000579358 USP54Q70EL1 1684 aa13.91□□□□□ -0.18
MKS1-208ENST00000579358 C11orf95C9JLR9 678 aaPredicted RBP13.9□□□□□ -0.18
MKS1-208ENST00000579358 ILDR2Q71H61 639 aa13.9□□□□□ -0.18
MKS1-208ENST00000579358 COL14A1Q05707 1796 aaKnown RBP13.9□□□□□ -0.18
MKS1-208ENST00000579358 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.9□□□□□ -0.18
MKS1-208ENST00000579358 KIF7Q2M1P5 1343 aa13.9□□□□□ -0.19
MKS1-208ENST00000579358 ZC3H6P61129 1189 aaKnown RBP13.89□□□□□ -0.19
MKS1-208ENST00000579358 POLR3GLQ9BT43 218 aa13.89□□□□□ -0.19
MKS1-208ENST00000579358 QTRT2Q9H974 415 aaKnown RBP13.89□□□□□ -0.19
MKS1-208ENST00000579358 CDK12Q9NYV4 1490 aaPredicted RBP13.88□□□□□ -0.19
MKS1-208ENST00000579358 NWD2Q9ULI1 1742 aa13.88□□□□□ -0.19
MKS1-208ENST00000579358 RXRBP28702 533 aa13.88□□□□□ -0.19
MKS1-208ENST00000579358 ZEB1P37275 1124 aaPredicted RBP13.88□□□□□ -0.19
MKS1-208ENST00000579358 RBM6P78332 1123 aaKnown RBP13.88□□□□□ -0.19
MKS1-208ENST00000579358 NSD3Q9BZ95 1437 aa13.88□□□□□ -0.19
MKS1-208ENST00000579358 PLCH1Q4KWH8 1693 aa13.88□□□□□ -0.19
MKS1-208ENST00000579358 AATKQ6ZMQ8 1374 aa13.87□□□□□ -0.19
MKS1-208ENST00000579358 NFAT5O94916 1531 aa13.87□□□□□ -0.19
MKS1-208ENST00000579358 VPS72Q15906 364 aa13.87□□□□□ -0.19
MKS1-208ENST00000579358 CARD14Q9BXL6 1004 aa13.87□□□□□ -0.19
MKS1-208ENST00000579358 BTG4Q9NY30 223 aa13.87□□□□□ -0.19
MKS1-208ENST00000579358 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
MKS1-208ENST00000579358 FYB1O15117 783 aa13.86□□□□□ -0.19
MKS1-208ENST00000579358 CHRNA2Q15822 529 aa13.86□□□□□ -0.19
MKS1-208ENST00000579358 ARHGEF25Q86VW2 580 aa13.86□□□□□ -0.19
MKS1-208ENST00000579358 COG3Q96JB2 828 aa13.86□□□□□ -0.19
MKS1-208ENST00000579358 LMO7Q8WWI1 1683 aa13.85□□□□□ -0.19
MKS1-208ENST00000579358 ABCC6O95255 1503 aa13.85□□□□□ -0.19
MKS1-208ENST00000579358 CCDC7Q96M83 1385 aa13.85□□□□□ -0.19
MKS1-208ENST00000579358 GJD4Q96KN9 370 aaPredicted RBP13.85□□□□□ -0.19
MKS1-208ENST00000579358 CGNL1Q0VF96 1302 aa13.85□□□□□ -0.19
MKS1-208ENST00000579358 NRAPQ86VF7 1730 aa13.84□□□□□ -0.19
MKS1-208ENST00000579358 PANK3Q9H999 370 aa13.84□□□□□ -0.19
MKS1-208ENST00000579358 CAMTA1Q9Y6Y1 1673 aa13.83□□□□□ -0.2
MKS1-208ENST00000579358 GGNBP2Q9H3C7 697 aa13.83□□□□□ -0.2
MKS1-208ENST00000579358 WASHC2AQ641Q2 1341 aa13.83□□□□□ -0.2
MKS1-208ENST00000579358 RGS12O14924 1447 aa13.82□□□□□ -0.2
MKS1-208ENST00000579358 COL5A2P05997 1499 aaPredicted RBP13.82□□□□□ -0.2
MKS1-208ENST00000579358 SOX12O15370 315 aa13.82□□□□□ -0.2
MKS1-208ENST00000579358 NSD2O96028 1365 aa13.82□□□□□ -0.2
MKS1-208ENST00000579358 GLI3P10071 1580 aa13.81□□□□□ -0.2
MKS1-208ENST00000579358 SPATA31A5Q5VU36 1347 aa13.81□□□□□ -0.2
MKS1-208ENST00000579358 SPATA31A7Q8IWB4 1347 aa13.81□□□□□ -0.2
MKS1-208ENST00000579358 ZBTB7CA1YPR0 619 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms