RNA–Protein interactions for RNA: ENST00000578998.1

RBFOX3-202, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 3,072 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-202ENST00000578998 PLEKHF1Q96S99 279 aa16.66■□□□□ 0.26
RBFOX3-202ENST00000578998 PRKAR2BP31323 418 aa16.66■□□□□ 0.26
RBFOX3-202ENST00000578998 HDGFL2Q7Z4V5 671 aaPredicted RBP16.66■□□□□ 0.26
RBFOX3-202ENST00000578998 C22orf23Q9BZE7 217 aa16.66■□□□□ 0.26
RBFOX3-202ENST00000578998 OSCARQ8IYS5 282 aa16.65■□□□□ 0.26
RBFOX3-202ENST00000578998 DDX19BQ9UMR2 479 aa16.65■□□□□ 0.26
RBFOX3-202ENST00000578998 GLI2P10070 1586 aa16.65■□□□□ 0.26
RBFOX3-202ENST00000578998 FRMPD1Q5SYB0 1578 aa16.64■□□□□ 0.25
RBFOX3-202ENST00000578998 SETBP1Q9Y6X0 1596 aa16.64■□□□□ 0.25
RBFOX3-202ENST00000578998 MYO3AQ8NEV4 1616 aa16.63■□□□□ 0.25
RBFOX3-202ENST00000578998 ABCC3O15438 1527 aa16.63■□□□□ 0.25
RBFOX3-202ENST00000578998 PPLO60437 1756 aa16.63■□□□□ 0.25
RBFOX3-202ENST00000578998 LMTK2Q8IWU2 1503 aa16.62■□□□□ 0.25
RBFOX3-202ENST00000578998 FOXD4L1Q9NU39 408 aa16.62■□□□□ 0.25
RBFOX3-202ENST00000578998 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
RBFOX3-202ENST00000578998 PHACTR3Q96KR7 559 aa16.61■□□□□ 0.25
RBFOX3-202ENST00000578998 NEURL4Q96JN8 1562 aa16.61■□□□□ 0.25
RBFOX3-202ENST00000578998 ABCC11Q96J66 1382 aa16.61■□□□□ 0.25
RBFOX3-202ENST00000578998 AAMPQ13685 434 aa16.6■□□□□ 0.25
RBFOX3-202ENST00000578998 EMILIN1Q9Y6C2 1016 aa16.6■□□□□ 0.25
RBFOX3-202ENST00000578998 NSD2O96028 1365 aa16.6■□□□□ 0.25
RBFOX3-202ENST00000578998 NLRP1Q9C000 1473 aa16.6■□□□□ 0.25
RBFOX3-202ENST00000578998 ANKRD45Q5TZF3 282 aa16.59■□□□□ 0.25
RBFOX3-202ENST00000578998 ANTXR1Q9H6X2 564 aa16.59■□□□□ 0.25
RBFOX3-202ENST00000578998 YEATS2Q9ULM3 1422 aa16.59■□□□□ 0.25
RBFOX3-202ENST00000578998 NCKAP5LQ9HCH0 1330 aa16.59■□□□□ 0.25
RBFOX3-202ENST00000578998 EIF5BO60841 1220 aaKnown RBP16.59■□□□□ 0.25
RBFOX3-202ENST00000578998 TSPYL6Q8N831 410 aa16.59■□□□□ 0.25
RBFOX3-202ENST00000578998 IPO8O15397 1037 aaKnown RBP16.59■□□□□ 0.25
RBFOX3-202ENST00000578998 SLC52A1Q9NWF4 448 aa16.59■□□□□ 0.25
RBFOX3-202ENST00000578998 CAMSAP1Q5T5Y3 1602 aa16.59■□□□□ 0.25
RBFOX3-202ENST00000578998 MLH3Q9UHC1 1453 aa16.58■□□□□ 0.25
RBFOX3-202ENST00000578998 SOX12O15370 315 aa16.57■□□□□ 0.24
RBFOX3-202ENST00000578998 ZBTB40Q9NUA8 1239 aa16.57■□□□□ 0.24
RBFOX3-202ENST00000578998 HECW2Q9P2P5 1572 aa16.57■□□□□ 0.24
RBFOX3-202ENST00000578998 NUTM2FA1L443 756 aa16.57■□□□□ 0.24
RBFOX3-202ENST00000578998 DCTN1Q14203 1278 aa16.57■□□□□ 0.24
RBFOX3-202ENST00000578998 SIGLEC1Q9BZZ2 1709 aa16.57■□□□□ 0.24
RBFOX3-202ENST00000578998 RRS1Q15050 365 aaKnown RBP16.56■□□□□ 0.24
RBFOX3-202ENST00000578998 NME9Q86XW9 330 aa16.56■□□□□ 0.24
RBFOX3-202ENST00000578998 ZC3H13Q5T200 1668 aaKnown RBP16.56■□□□□ 0.24
RBFOX3-202ENST00000578998 ATAD2Q6PL18 1390 aa16.56■□□□□ 0.24
RBFOX3-202ENST00000578998 HSCBQ8IWL3 235 aa16.56■□□□□ 0.24
RBFOX3-202ENST00000578998 POLKQ9UBT6 870 aa16.56■□□□□ 0.24
RBFOX3-202ENST00000578998 NEXMIFQ5QGS0 1516 aa16.56■□□□□ 0.24
RBFOX3-202ENST00000578998 FAM83GA6ND36 823 aa16.56■□□□□ 0.24
RBFOX3-202ENST00000578998 HDAC1Q13547 482 aaPredicted RBP16.56■□□□□ 0.24
RBFOX3-202ENST00000578998 CYB5RLQ6IPT4 315 aa16.55■□□□□ 0.24
RBFOX3-202ENST00000578998 KIF16BQ96L93 1317 aa16.55■□□□□ 0.24
RBFOX3-202ENST00000578998 CT47B1P0C2W7 299 aaPredicted RBP16.55■□□□□ 0.24
RBFOX3-202ENST00000578998 PUS7Q96PZ0 661 aaKnown RBP16.55■□□□□ 0.24
RBFOX3-202ENST00000578998 YTHDC2Q9H6S0 1430 aaKnown RBP16.55■□□□□ 0.24
RBFOX3-202ENST00000578998 APBB1O00213 710 aa16.54■□□□□ 0.24
RBFOX3-202ENST00000578998 ARHGEF28Q8N1W1 1705 aaKnown RBP16.54■□□□□ 0.24
RBFOX3-202ENST00000578998 SMC5Q8IY18 1101 aa16.54■□□□□ 0.24
RBFOX3-202ENST00000578998 HSP90AA1P07900 732 aaKnown RBP16.53■□□□□ 0.24
RBFOX3-202ENST00000578998 CHD1LQ86WJ1 897 aa16.53■□□□□ 0.24
RBFOX3-202ENST00000578998 RSPH6AQ9H0K4 717 aa16.53■□□□□ 0.24
RBFOX3-202ENST00000578998 FCHSD2O94868 740 aa16.53■□□□□ 0.24
RBFOX3-202ENST00000578998 TXNDC2Q86VQ3 553 aa16.53■□□□□ 0.24
RBFOX3-202ENST00000578998 PNNQ9H307 717 aaKnown RBP16.53■□□□□ 0.24
RBFOX3-202ENST00000578998 MCM4P33991 863 aa16.52■□□□□ 0.23
RBFOX3-202ENST00000578998 HSP90AB1P08238 724 aaKnown RBP16.51■□□□□ 0.23
RBFOX3-202ENST00000578998 NUCB1Q02818 461 aa16.51■□□□□ 0.23
RBFOX3-202ENST00000578998 VIRMAQ69YN4 1812 aaKnown RBP16.51■□□□□ 0.23
RBFOX3-202ENST00000578998 CHMP5Q9NZZ3 219 aa16.5■□□□□ 0.23
RBFOX3-202ENST00000578998 NFE2L2Q16236 605 aa16.5■□□□□ 0.23
RBFOX3-202ENST00000578998 MBIPQ9NS73 344 aa16.5■□□□□ 0.23
RBFOX3-202ENST00000578998 VAMP4O75379 141 aa16.49■□□□□ 0.23
RBFOX3-202ENST00000578998 IL16Q14005 1332 aa16.49■□□□□ 0.23
RBFOX3-202ENST00000578998 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
RBFOX3-202ENST00000578998 RBM42Q9BTD8 480 aaKnown RBP16.49■□□□□ 0.23
RBFOX3-202ENST00000578998 PIK3C2BO00750 1634 aa16.49■□□□□ 0.23
RBFOX3-202ENST00000578998 KRT24Q2M2I5 525 aa16.49■□□□□ 0.23
RBFOX3-202ENST00000578998 C8orf58Q8NAV2 365 aa16.49■□□□□ 0.23
RBFOX3-202ENST00000578998 PANK2Q9BZ23 570 aa16.49■□□□□ 0.23
RBFOX3-202ENST00000578998 PTPRMP28827 1452 aa16.49■□□□□ 0.23
RBFOX3-202ENST00000578998 CD163L1Q9NR16 1453 aa16.49■□□□□ 0.23
RBFOX3-202ENST00000578998 TWISTNBQ3B726 338 aaPredicted RBP16.49■□□□□ 0.23
RBFOX3-202ENST00000578998 COL3A1P02461 1466 aaPredicted RBP16.48■□□□□ 0.23
RBFOX3-202ENST00000578998 TRAK2O60296 914 aa16.48■□□□□ 0.23
RBFOX3-202ENST00000578998 MYO5BQ9ULV0 1848 aa16.48■□□□□ 0.23
RBFOX3-202ENST00000578998 USP32Q8NFA0 1604 aa16.47■□□□□ 0.23
RBFOX3-202ENST00000578998 ADGRB2O60241 1585 aa16.47■□□□□ 0.23
RBFOX3-202ENST00000578998 GOLGA6L3A6NEY3 463 aa16.47■□□□□ 0.23
RBFOX3-202ENST00000578998 ZBTB7BO15156 539 aaPredicted RBP16.47■□□□□ 0.23
RBFOX3-202ENST00000578998 ALDH1L2Q3SY69 923 aa16.47■□□□□ 0.23
RBFOX3-202ENST00000578998 MRPL50Q8N5N7 158 aaKnown RBP16.47■□□□□ 0.23
RBFOX3-202ENST00000578998 FAM69CQ0P6D2 419 aa16.47■□□□□ 0.23
RBFOX3-202ENST00000578998 DIP2CQ9Y2E4 1556 aa16.45■□□□□ 0.22
RBFOX3-202ENST00000578998 GNAI1P63096 354 aa16.45■□□□□ 0.22
RBFOX3-202ENST00000578998 AEBP1Q8IUX7 1158 aa16.45■□□□□ 0.22
RBFOX3-202ENST00000578998 COG3Q96JB2 828 aa16.45■□□□□ 0.22
RBFOX3-202ENST00000578998 CD2BP2O95400 341 aaKnown RBP16.44■□□□□ 0.22
RBFOX3-202ENST00000578998 NCBP3Q53F19 620 aaKnown RBP16.44■□□□□ 0.22
RBFOX3-202ENST00000578998 L1TD1Q5T7N2 865 aaKnown RBP16.44■□□□□ 0.22
RBFOX3-202ENST00000578998 SIRT2Q8IXJ6 389 aa16.44■□□□□ 0.22
RBFOX3-202ENST00000578998 XRCC6P12956 609 aaKnown RBP eCLIP16.44■□□□□ 0.22
RBFOX3-202ENST00000578998 LRRC7Q96NW7 1537 aa16.44■□□□□ 0.22
RBFOX3-202ENST00000578998 TBC1D9Q6ZT07 1266 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms