RNA–Protein interactions for RNA: ENST00000578698.1

PTPRM-209, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-209ENST00000578698 PURBQ96QR8 312 aaKnown RBP6.53□□□□□ -1.36
PTPRM-209ENST00000578698 PLEKHG3A1L390 1219 aa6.52□□□□□ -1.37
PTPRM-209ENST00000578698 SOBPA7XYQ1 873 aa6.52□□□□□ -1.37
PTPRM-209ENST00000578698 MRPL14Q6P1L8 145 aaKnown RBP6.52□□□□□ -1.37
PTPRM-209ENST00000578698 UNC93B1Q9H1C4 597 aa6.52□□□□□ -1.37
PTPRM-209ENST00000578698 IRF6O14896 467 aa6.51□□□□□ -1.37
PTPRM-209ENST00000578698 FDX1P10109 184 aa6.51□□□□□ -1.37
PTPRM-209ENST00000578698 BAP1Q92560 729 aa6.51□□□□□ -1.37
PTPRM-209ENST00000578698 GPBP1L1Q9HC44 474 aaPredicted RBP6.51□□□□□ -1.37
PTPRM-209ENST00000578698 WDR4P57081 412 aaKnown RBP6.5□□□□□ -1.37
PTPRM-209ENST00000578698 GPCPD1Q9NPB8 672 aa6.5□□□□□ -1.37
PTPRM-209ENST00000578698 ADH1CP00326 375 aa6.49□□□□□ -1.37
PTPRM-209ENST00000578698 CLCN1P35523 988 aa6.49□□□□□ -1.37
PTPRM-209ENST00000578698 PTPRNQ16849 979 aa6.49□□□□□ -1.37
PTPRM-209ENST00000578698 ZNF511Q8NB15 262 aa6.49□□□□□ -1.37
PTPRM-209ENST00000578698 CCDC102AQ96A19 550 aa6.49□□□□□ -1.37
PTPRM-209ENST00000578698 FAM217BQ9NTX9 383 aaPredicted RBP6.49□□□□□ -1.37
PTPRM-209ENST00000578698 TIMP2P16035 220 aa6.48□□□□□ -1.37
PTPRM-209ENST00000578698 VARSP26640 1264 aaKnown RBP6.48□□□□□ -1.37
PTPRM-209ENST00000578698 SUZ12Q15022 739 aaKnown RBP6.48□□□□□ -1.37
PTPRM-209ENST00000578698 KDM4CQ9H3R0 1056 aa6.48□□□□□ -1.37
PTPRM-209ENST00000578698 PCDHGC3Q9UN70 934 aa6.48□□□□□ -1.37
PTPRM-209ENST00000578698 MINK1Q8N4C8 1332 aaPredicted RBP6.48□□□□□ -1.37
PTPRM-209ENST00000578698 TRIM66O15016 1216 aa6.47□□□□□ -1.37
PTPRM-209ENST00000578698 MAN1A2O60476 641 aa6.47□□□□□ -1.37
PTPRM-209ENST00000578698 PDE4DQ08499 809 aa6.47□□□□□ -1.37
PTPRM-209ENST00000578698 C6orf118Q5T5N4 469 aa6.47□□□□□ -1.37
PTPRM-209ENST00000578698 EVA1BQ9NVM1 165 aa6.47□□□□□ -1.37
PTPRM-209ENST00000578698 VSIG8P0DPA2 414 aa6.46□□□□□ -1.38
PTPRM-209ENST00000578698 KCNH2Q12809 1159 aa6.46□□□□□ -1.38
PTPRM-209ENST00000578698 ARID5BQ14865 1188 aa6.46□□□□□ -1.38
PTPRM-209ENST00000578698 KCTD17Q8N5Z5 321 aa6.46□□□□□ -1.38
PTPRM-209ENST00000578698 CTHP32929 405 aa6.45□□□□□ -1.38
PTPRM-209ENST00000578698 IL27Q8NEV9 243 aa6.45□□□□□ -1.38
PTPRM-209ENST00000578698 PRR7Q8TB68 274 aa6.45□□□□□ -1.38
PTPRM-209ENST00000578698 FAM174AQ8TBP5 190 aa6.45□□□□□ -1.38
PTPRM-209ENST00000578698 PODXL2Q9NZ53 605 aa6.45□□□□□ -1.38
PTPRM-209ENST00000578698 ZIC2O95409 532 aaPredicted RBP6.44□□□□□ -1.38
PTPRM-209ENST00000578698 ZFAND3Q9H8U3 227 aa6.44□□□□□ -1.38
PTPRM-209ENST00000578698 UPP2O95045 317 aa6.43□□□□□ -1.38
PTPRM-209ENST00000578698 NDUFV2P19404 249 aa6.43□□□□□ -1.38
PTPRM-209ENST00000578698 KCNMA1Q12791 1236 aa6.43□□□□□ -1.38
PTPRM-209ENST00000578698 MPNDQ8N594 471 aa6.43□□□□□ -1.38
PTPRM-209ENST00000578698 PPFIA3O75145 1194 aa6.42□□□□□ -1.38
PTPRM-209ENST00000578698 BMP2P12643 396 aa6.42□□□□□ -1.38
PTPRM-209ENST00000578698 MTMR2Q13614 643 aa6.42□□□□□ -1.38
PTPRM-209ENST00000578698 AGERQ15109 404 aa6.42□□□□□ -1.38
PTPRM-209ENST00000578698 SPIRE2Q8WWL2 714 aa6.42□□□□□ -1.38
PTPRM-209ENST00000578698 ITPKCQ96DU7 683 aa6.42□□□□□ -1.38
PTPRM-209ENST00000578698 MOXD2PA6NHM9 499 aa6.41□□□□□ -1.38
PTPRM-209ENST00000578698 UBTFP17480 764 aaKnown RBP6.41□□□□□ -1.38
PTPRM-209ENST00000578698 TMEM151AQ8N4L1 468 aa6.41□□□□□ -1.38
PTPRM-209ENST00000578698 SSTR3P32745 418 aaPredicted RBP6.4□□□□□ -1.38
PTPRM-209ENST00000578698 TTLL12Q14166 644 aaPredicted RBP6.4□□□□□ -1.38
PTPRM-209ENST00000578698 FOXJ1Q92949 421 aa6.4□□□□□ -1.38
PTPRM-209ENST00000578698 KLF16Q9BXK1 252 aaPredicted RBP6.4□□□□□ -1.38
PTPRM-209ENST00000578698 SPDYE5A6NIY4 337 aa6.39□□□□□ -1.39
PTPRM-209ENST00000578698 RNF225M0QZC1 329 aaPredicted RBP6.39□□□□□ -1.39
PTPRM-209ENST00000578698 GDF11O95390 407 aa6.39□□□□□ -1.39
PTPRM-209ENST00000578698 AMHR2Q16671 573 aa6.39□□□□□ -1.39
PTPRM-209ENST00000578698 DESI1Q6ICB0 168 aa6.39□□□□□ -1.39
PTPRM-209ENST00000578698 LINC00528Q8N1L1 170 aa6.39□□□□□ -1.39
PTPRM-209ENST00000578698 DDRGK1Q96HY6 314 aa6.39□□□□□ -1.39
PTPRM-209ENST00000578698 NR3C2P08235 984 aa6.38□□□□□ -1.39
PTPRM-209ENST00000578698 GSK3AP49840 483 aa6.38□□□□□ -1.39
PTPRM-209ENST00000578698 RASSF7Q02833 373 aa6.38□□□□□ -1.39
PTPRM-209ENST00000578698 NR5A1Q13285 461 aa6.38□□□□□ -1.39
PTPRM-209ENST00000578698 PARP9Q8IXQ6 854 aa6.38□□□□□ -1.39
PTPRM-209ENST00000578698 CNTNAP3BQ96NU0 1288 aa6.38□□□□□ -1.39
PTPRM-209ENST00000578698 CDK15Q96Q40 435 aa6.38□□□□□ -1.39
PTPRM-209ENST00000578698 CNTNAP3Q9BZ76 1288 aa6.38□□□□□ -1.39
PTPRM-209ENST00000578698 FAM117AQ9C073 453 aa6.38□□□□□ -1.39
PTPRM-209ENST00000578698 MAP10Q9P2G4 905 aa6.37□□□□□ -1.39
PTPRM-209ENST00000578698 DNMT3LQ9UJW3 386 aa6.37□□□□□ -1.39
PTPRM-209ENST00000578698 MEIOBQ8N635 442 aa6.36□□□□□ -1.39
PTPRM-209ENST00000578698 SOS2Q07890 1332 aaPredicted RBP6.35□□□□□ -1.39
PTPRM-209ENST00000578698 SPTLC1O15269 473 aa6.35□□□□□ -1.39
PTPRM-209ENST00000578698 FSHRP23945 695 aa6.35□□□□□ -1.39
PTPRM-209ENST00000578698 KRT76Q01546 638 aa6.35□□□□□ -1.39
PTPRM-209ENST00000578698 TRIM26Q12899 539 aaPredicted RBP6.35□□□□□ -1.39
PTPRM-209ENST00000578698 LYPD8Q6UX82 237 aa6.35□□□□□ -1.39
PTPRM-209ENST00000578698 SVOPQ8N4V2 548 aa6.35□□□□□ -1.39
PTPRM-209ENST00000578698 ADAMTS8Q9UP79 889 aa6.35□□□□□ -1.39
PTPRM-209ENST00000578698 CFAP99D6REC4 459 aa6.34□□□□□ -1.39
PTPRM-209ENST00000578698 C4orf48Q5BLP8 95 aa6.34□□□□□ -1.39
PTPRM-209ENST00000578698 BPHLQ86WA6 291 aaPredicted RBP6.34□□□□□ -1.39
PTPRM-209ENST00000578698 GPR161Q8N6U8 529 aaKnown RBP6.34□□□□□ -1.39
PTPRM-209ENST00000578698 GRM5P41594 1212 aa6.33□□□□□ -1.4
PTPRM-209ENST00000578698 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.33□□□□□ -1.4
PTPRM-209ENST00000578698 GPAT2Q6NUI2 795 aa6.33□□□□□ -1.4
PTPRM-209ENST00000578698 TSC1Q92574 1164 aa6.33□□□□□ -1.4
PTPRM-209ENST00000578698 TSEN34Q9BSV6 310 aaKnown RBP6.33□□□□□ -1.4
PTPRM-209ENST00000578698 BEGAINQ9BUH8 593 aa6.33□□□□□ -1.4
PTPRM-209ENST00000578698 COL25A1Q9BXS0 654 aaPredicted RBP6.33□□□□□ -1.4
PTPRM-209ENST00000578698 TTLL8A6PVC2 850 aa6.32□□□□□ -1.4
PTPRM-209ENST00000578698 F12P00748 615 aaPredicted RBP6.32□□□□□ -1.4
PTPRM-209ENST00000578698 PTSQ03393 145 aa6.32□□□□□ -1.4
PTPRM-209ENST00000578698 RSBN1LQ6PCB5 846 aaPredicted RBP6.32□□□□□ -1.4
PTPRM-209ENST00000578698 GIGYF2Q6Y7W6 1299 aaKnown RBP6.32□□□□□ -1.4
PTPRM-209ENST00000578698 VASH1Q7L8A9 365 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms