RNA–Protein interactions for RNA: ENST00000578103.1

TTC19-209, Transcript of tetratricopeptide repeat domain 19, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TTC19, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-209ENST00000578103 PHF8Q9UPP1 1060 aa8.86□□□□□ -0.99
TTC19-209ENST00000578103 TRAK1Q9UPV9 953 aa8.86□□□□□ -0.99
TTC19-209ENST00000578103 SBNO1A3KN83 1393 aa8.86□□□□□ -0.99
TTC19-209ENST00000578103 ARHGEF10O15013 1369 aa8.86□□□□□ -0.99
TTC19-209ENST00000578103 TULP4Q9NRJ4 1543 aa8.85□□□□□ -0.99
TTC19-209ENST00000578103 NUTM2BA6NNL0 878 aaPredicted RBP8.85□□□□□ -0.99
TTC19-209ENST00000578103 NUTM2EB1AL46 878 aaPredicted RBP8.85□□□□□ -0.99
TTC19-209ENST00000578103 FOXO3O43524 673 aa8.85□□□□□ -0.99
TTC19-209ENST00000578103 TRIM26Q12899 539 aaPredicted RBP8.85□□□□□ -0.99
TTC19-209ENST00000578103 NBR1Q14596 966 aa8.85□□□□□ -0.99
TTC19-209ENST00000578103 NUTM2AQ8IVF1 878 aaPredicted RBP8.85□□□□□ -0.99
TTC19-209ENST00000578103 DDX17Q92841 729 aaKnown RBP8.85□□□□□ -0.99
TTC19-209ENST00000578103 CDK12Q9NYV4 1490 aaPredicted RBP8.84□□□□□ -0.99
TTC19-209ENST00000578103 COL22A1Q8NFW1 1626 aaPredicted RBP8.84□□□□□ -0.99
TTC19-209ENST00000578103 WASLO00401 505 aaPredicted RBP8.84□□□□□ -0.99
TTC19-209ENST00000578103 SAFB2Q14151 953 aaKnown RBP eCLIP8.84□□□□□ -0.99
TTC19-209ENST00000578103 POTEAQ6S8J7 498 aa8.84□□□□□ -0.99
TTC19-209ENST00000578103 GPRASP1Q5JY77 1395 aa8.84□□□□□ -0.99
TTC19-209ENST00000578103 AFF2P51816 1311 aa8.83□□□□□ -1
TTC19-209ENST00000578103 SPATA31A3Q5VYP0 1347 aa8.83□□□□□ -1
TTC19-209ENST00000578103 TNS3Q68CZ2 1445 aa8.83□□□□□ -1
TTC19-209ENST00000578103 NUTM2FA1L443 756 aa8.83□□□□□ -1
TTC19-209ENST00000578103 C8orf37Q96NL8 207 aa8.83□□□□□ -1
TTC19-209ENST00000578103 MINK1Q8N4C8 1332 aaPredicted RBP8.82□□□□□ -1
TTC19-209ENST00000578103 RIOK3O14730 519 aaKnown RBP8.82□□□□□ -1
TTC19-209ENST00000578103 RXRBP28702 533 aa8.82□□□□□ -1
TTC19-209ENST00000578103 DCAF8Q5TAQ9 597 aa8.82□□□□□ -1
TTC19-209ENST00000578103 KRT28Q7Z3Y7 464 aa8.82□□□□□ -1
TTC19-209ENST00000578103 FNBP4Q8N3X1 1017 aaPredicted RBP8.82□□□□□ -1
TTC19-209ENST00000578103 L3MBTL2Q969R5 705 aa8.82□□□□□ -1
TTC19-209ENST00000578103 NGLY1Q96IV0 654 aa8.82□□□□□ -1
TTC19-209ENST00000578103 CENPJQ9HC77 1338 aaPredicted RBP8.81□□□□□ -1
TTC19-209ENST00000578103 ADAMTS2O95450 1211 aa8.81□□□□□ -1
TTC19-209ENST00000578103 TRPC5Q9UL62 973 aaPredicted RBP8.81□□□□□ -1
TTC19-209ENST00000578103 ARHGEF28Q8N1W1 1705 aaKnown RBP8.8□□□□□ -1
TTC19-209ENST00000578103 RBM6P78332 1123 aaKnown RBP8.8□□□□□ -1
TTC19-209ENST00000578103 XPCQ01831 940 aaPredicted RBP8.8□□□□□ -1
TTC19-209ENST00000578103 HIRIP3Q9BW71 556 aaPredicted RBP8.8□□□□□ -1
TTC19-209ENST00000578103 ROCK2O75116 1388 aaKnown RBP8.8□□□□□ -1
TTC19-209ENST00000578103 TONSLQ96HA7 1378 aa8.8□□□□□ -1
TTC19-209ENST00000578103 ATP7BP35670 1465 aa8.8□□□□□ -1
TTC19-209ENST00000578103 BRD4O60885 1362 aaPredicted RBP8.79□□□□□ -1
TTC19-209ENST00000578103 GTPBP6O43824 516 aaPredicted RBP8.79□□□□□ -1
TTC19-209ENST00000578103 NGDNQ8NEJ9 315 aaKnown RBP8.79□□□□□ -1
TTC19-209ENST00000578103 NUDT16Q96DE0 195 aaKnown RBP8.79□□□□□ -1
TTC19-209ENST00000578103 USP21Q9UK80 565 aa8.79□□□□□ -1
TTC19-209ENST00000578103 CCDC61Q9Y6R9 512 aa8.79□□□□□ -1
TTC19-209ENST00000578103 PRR36Q9H6K5 1346 aa8.79□□□□□ -1
TTC19-209ENST00000578103 NEUROD1Q13562 356 aa8.78□□□□□ -1
TTC19-209ENST00000578103 NBPF1Q3BBV0 1214 aa8.78□□□□□ -1
TTC19-209ENST00000578103 CDK19Q9BWU1 502 aa8.78□□□□□ -1
TTC19-209ENST00000578103 QTRT2Q9H974 415 aaKnown RBP8.78□□□□□ -1
TTC19-209ENST00000578103 USP32Q8NFA0 1604 aa8.78□□□□□ -1
TTC19-209ENST00000578103 ITSN1Q15811 1721 aa8.77□□□□□ -1
TTC19-209ENST00000578103 POLR3AO14802 1390 aaPredicted RBP8.77□□□□□ -1.01
TTC19-209ENST00000578103 SBNO2Q9Y2G9 1366 aa8.77□□□□□ -1.01
TTC19-209ENST00000578103 PLEKHG3A1L390 1219 aa8.77□□□□□ -1.01
TTC19-209ENST00000578103 STK25O00506 426 aa8.77□□□□□ -1.01
TTC19-209ENST00000578103 PMFBP1Q8TBY8 1022 aa8.77□□□□□ -1.01
TTC19-209ENST00000578103 SIN3AQ96ST3 1273 aa8.77□□□□□ -1.01
TTC19-209ENST00000578103 ATRNO75882 1429 aa8.77□□□□□ -1.01
TTC19-209ENST00000578103 EVC2Q86UK5 1308 aa8.77□□□□□ -1.01
TTC19-209ENST00000578103 CLSPNQ9HAW4 1339 aa8.77□□□□□ -1.01
TTC19-209ENST00000578103 SRPK2P78362 688 aaKnown RBP8.76□□□□□ -1.01
TTC19-209ENST00000578103 LMOD2Q6P5Q4 547 aa8.76□□□□□ -1.01
TTC19-209ENST00000578103 CREBZFQ9NS37 354 aa8.76□□□□□ -1.01
TTC19-209ENST00000578103 RALGAPBQ86X10 1494 aa8.76□□□□□ -1.01
TTC19-209ENST00000578103 TRPM1Q7Z4N2 1603 aa8.76□□□□□ -1.01
TTC19-209ENST00000578103 SLIT2O94813 1529 aa8.75□□□□□ -1.01
TTC19-209ENST00000578103 ATAD2Q6PL18 1390 aa8.75□□□□□ -1.01
TTC19-209ENST00000578103 UNC5CLQ8IV45 518 aa8.75□□□□□ -1.01
TTC19-209ENST00000578103 FAM212AQ96EL1 285 aa8.75□□□□□ -1.01
TTC19-209ENST00000578103 BCL9LQ86UU0 1499 aa8.75□□□□□ -1.01
TTC19-209ENST00000578103 RGS12O14924 1447 aa8.74□□□□□ -1.01
TTC19-209ENST00000578103 PAK3O75914 559 aaPredicted RBP8.74□□□□□ -1.01
TTC19-209ENST00000578103 CACNB1Q02641 598 aaPredicted RBP8.74□□□□□ -1.01
TTC19-209ENST00000578103 SPDYE1Q8NFV5 336 aaPredicted RBP8.74□□□□□ -1.01
TTC19-209ENST00000578103 TIMELESSQ9UNS1 1208 aa8.74□□□□□ -1.01
TTC19-209ENST00000578103 ACEP12821 1306 aa8.74□□□□□ -1.01
TTC19-209ENST00000578103 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.74□□□□□ -1.01
TTC19-209ENST00000578103 TRPM3Q9HCF6 1732 aaPredicted RBP8.74□□□□□ -1.01
TTC19-209ENST00000578103 PPIP5K1Q6PFW1 1433 aa8.73□□□□□ -1.01
TTC19-209ENST00000578103 TOPAZ1Q8N9V7 1692 aa8.73□□□□□ -1.01
TTC19-209ENST00000578103 MNX1P50219 401 aaPredicted RBP8.73□□□□□ -1.01
TTC19-209ENST00000578103 VPS72Q15906 364 aa8.73□□□□□ -1.01
TTC19-209ENST00000578103 NBPF8Q3BBV2 869 aa8.73□□□□□ -1.01
TTC19-209ENST00000578103 GJD4Q96KN9 370 aaPredicted RBP8.73□□□□□ -1.01
TTC19-209ENST00000578103 CARD11Q9BXL7 1154 aa8.73□□□□□ -1.01
TTC19-209ENST00000578103 CLEC11AQ9Y240 323 aa8.73□□□□□ -1.01
TTC19-209ENST00000578103 ALS2Q96Q42 1657 aa8.72□□□□□ -1.01
TTC19-209ENST00000578103 QRICH2Q9H0J4 1663 aa8.72□□□□□ -1.01
TTC19-209ENST00000578103 MARF1Q9Y4F3 1742 aaKnown RBP8.72□□□□□ -1.01
TTC19-209ENST00000578103 RGPD8O14715 1765 aaPredicted RBP8.72□□□□□ -1.01
TTC19-209ENST00000578103 RASEFQ8IZ41 740 aa8.72□□□□□ -1.01
TTC19-209ENST00000578103 PUS7Q96PZ0 661 aaKnown RBP8.72□□□□□ -1.01
TTC19-209ENST00000578103 NWD2Q9ULI1 1742 aa8.71□□□□□ -1.01
TTC19-209ENST00000578103 CABP2Q9NPB3 220 aa8.71□□□□□ -1.02
TTC19-209ENST00000578103 PRDM11Q9NQV5 511 aa8.71□□□□□ -1.02
TTC19-209ENST00000578103 USP19O94966 1318 aa8.71□□□□□ -1.02
TTC19-209ENST00000578103 NINLQ9Y2I6 1382 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms