RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 RICTORQ6R327 1708 aa9.05□□□□□ -0.96
KRT39-203ENST00000578078 NEURL4Q96JN8 1562 aa9.05□□□□□ -0.96
KRT39-203ENST00000578078 PTPRTO14522 1441 aa9.04□□□□□ -0.96
KRT39-203ENST00000578078 LMTK2Q8IWU2 1503 aa9.04□□□□□ -0.96
KRT39-203ENST00000578078 TCERG1O14776 1098 aaKnown RBP9.04□□□□□ -0.96
KRT39-203ENST00000578078 PPRC1Q5VV67 1664 aaKnown RBP9.04□□□□□ -0.96
KRT39-203ENST00000578078 MADDQ8WXG6 1647 aa9.04□□□□□ -0.96
KRT39-203ENST00000578078 PRR29P0C7W0 189 aa9.04□□□□□ -0.96
KRT39-203ENST00000578078 TTLL12Q14166 644 aaPredicted RBP9.04□□□□□ -0.96
KRT39-203ENST00000578078 RGL3Q3MIN7 710 aa9.04□□□□□ -0.96
KRT39-203ENST00000578078 SH3D19Q5HYK7 790 aa9.04□□□□□ -0.96
KRT39-203ENST00000578078 AMOTL2Q9Y2J4 779 aa9.04□□□□□ -0.96
KRT39-203ENST00000578078 SMG6Q86US8 1419 aaKnown RBP9.03□□□□□ -0.96
KRT39-203ENST00000578078 SPDYE16A6NNV3 312 aaPredicted RBP9.03□□□□□ -0.96
KRT39-203ENST00000578078 HNRNPUQ00839 825 aaKnown RBP eCLIP9.03□□□□□ -0.96
KRT39-203ENST00000578078 HSP90AA2PQ14568 343 aaPredicted RBP9.03□□□□□ -0.96
KRT39-203ENST00000578078 PDIA6Q15084 440 aa9.03□□□□□ -0.96
KRT39-203ENST00000578078 GPRASP1Q5JY77 1395 aa9.03□□□□□ -0.96
KRT39-203ENST00000578078 FRMPD1Q5SYB0 1578 aa9.02□□□□□ -0.97
KRT39-203ENST00000578078 KIAA1210Q9ULL0 1709 aa9.02□□□□□ -0.97
KRT39-203ENST00000578078 ZNF579Q8NAF0 562 aaKnown RBP9.01□□□□□ -0.97
KRT39-203ENST00000578078 STAC3Q96MF2 364 aa9.01□□□□□ -0.97
KRT39-203ENST00000578078 BRPF3Q9ULD4 1205 aa9.01□□□□□ -0.97
KRT39-203ENST00000578078 IQGAP1P46940 1657 aa9.01□□□□□ -0.97
KRT39-203ENST00000578078 ZC3H13Q5T200 1668 aaKnown RBP9.01□□□□□ -0.97
KRT39-203ENST00000578078 DIP2CQ9Y2E4 1556 aa9.01□□□□□ -0.97
KRT39-203ENST00000578078 IFT172Q9UG01 1749 aa9.01□□□□□ -0.97
KRT39-203ENST00000578078 DIP2BQ9P265 1576 aa9□□□□□ -0.97
KRT39-203ENST00000578078 CAMSAP1Q5T5Y3 1602 aa9□□□□□ -0.97
KRT39-203ENST00000578078 ST20-MTHFSA0A0A6YYL1 179 aa9□□□□□ -0.97
KRT39-203ENST00000578078 KCNA1Q09470 495 aa9□□□□□ -0.97
KRT39-203ENST00000578078 CYB5RLQ6IPT4 315 aa9□□□□□ -0.97
KRT39-203ENST00000578078 GIGYF2Q6Y7W6 1299 aaKnown RBP9□□□□□ -0.97
KRT39-203ENST00000578078 POLR3GLQ9BT43 218 aa9□□□□□ -0.97
KRT39-203ENST00000578078 COG6Q9Y2V7 657 aa9□□□□□ -0.97
KRT39-203ENST00000578078 DPYSL4O14531 572 aa8.99□□□□□ -0.97
KRT39-203ENST00000578078 L1TD1Q5T7N2 865 aaKnown RBP8.99□□□□□ -0.97
KRT39-203ENST00000578078 OXER1Q8TDS5 423 aa8.99□□□□□ -0.97
KRT39-203ENST00000578078 PRKRIP1Q9H875 184 aaPredicted RBP8.99□□□□□ -0.97
KRT39-203ENST00000578078 CABP2Q9NPB3 220 aa8.99□□□□□ -0.97
KRT39-203ENST00000578078 MROH2AA6NES4 1674 aa8.99□□□□□ -0.97
KRT39-203ENST00000578078 TSPOAP1O95153 1857 aa8.99□□□□□ -0.97
KRT39-203ENST00000578078 GNPATO15228 680 aa8.98□□□□□ -0.97
KRT39-203ENST00000578078 HSP90AA1P07900 732 aaKnown RBP8.98□□□□□ -0.97
KRT39-203ENST00000578078 FGD1P98174 961 aa8.98□□□□□ -0.97
KRT39-203ENST00000578078 CALD1Q05682 793 aaKnown RBP8.98□□□□□ -0.97
KRT39-203ENST00000578078 B4GALNT3Q6L9W6 998 aa8.98□□□□□ -0.97
KRT39-203ENST00000578078 ABCC3O15438 1527 aa8.98□□□□□ -0.97
KRT39-203ENST00000578078 CFAP65Q6ZU64 1925 aaKnown RBP8.98□□□□□ -0.97
KRT39-203ENST00000578078 MYOM2P54296 1465 aa8.97□□□□□ -0.97
KRT39-203ENST00000578078 COL17A1Q9UMD9 1497 aaPredicted RBP8.97□□□□□ -0.97
KRT39-203ENST00000578078 ZNF330Q9Y3S2 320 aaPredicted RBP8.97□□□□□ -0.97
KRT39-203ENST00000578078 ZMYM4Q5VZL5 1548 aa8.97□□□□□ -0.97
KRT39-203ENST00000578078 SPDYE5A6NIY4 337 aa8.97□□□□□ -0.97
KRT39-203ENST00000578078 BRD1O95696 1058 aa8.97□□□□□ -0.97
KRT39-203ENST00000578078 CLCN1P35523 988 aa8.97□□□□□ -0.97
KRT39-203ENST00000578078 AAMPQ13685 434 aa8.97□□□□□ -0.97
KRT39-203ENST00000578078 UGGT1Q9NYU2 1555 aa8.97□□□□□ -0.97
KRT39-203ENST00000578078 ADGRB3O60242 1522 aa8.96□□□□□ -0.97
KRT39-203ENST00000578078 NUTM2FA1L443 756 aa8.96□□□□□ -0.98
KRT39-203ENST00000578078 NBPF1Q3BBV0 1214 aa8.96□□□□□ -0.98
KRT39-203ENST00000578078 PPP1R15BQ5SWA1 713 aa8.96□□□□□ -0.98
KRT39-203ENST00000578078 PPLO60437 1756 aa8.96□□□□□ -0.98
KRT39-203ENST00000578078 RAPGEF3O95398 923 aa8.95□□□□□ -0.98
KRT39-203ENST00000578078 MS4A4AQ96JQ5 239 aa8.95□□□□□ -0.98
KRT39-203ENST00000578078 TSPYL2Q9H2G4 693 aaPredicted RBP8.95□□□□□ -0.98
KRT39-203ENST00000578078 PDCL3Q9H2J4 239 aa8.95□□□□□ -0.98
KRT39-203ENST00000578078 MRS2Q9HD23 443 aa8.95□□□□□ -0.98
KRT39-203ENST00000578078 CLEC11AQ9Y240 323 aa8.95□□□□□ -0.98
KRT39-203ENST00000578078 KTN1Q86UP2 1357 aaKnown RBP8.95□□□□□ -0.98
KRT39-203ENST00000578078 SKIV2LQ15477 1246 aaKnown RBP8.94□□□□□ -0.98
KRT39-203ENST00000578078 NFKBIBQ15653 356 aa8.94□□□□□ -0.98
KRT39-203ENST00000578078 GGT6Q6P531 493 aa8.94□□□□□ -0.98
KRT39-203ENST00000578078 BACH2Q9BYV9 841 aa8.94□□□□□ -0.98
KRT39-203ENST00000578078 EMILIN3Q9NT22 766 aa8.94□□□□□ -0.98
KRT39-203ENST00000578078 EIF3AQ14152 1382 aaKnown RBP8.94□□□□□ -0.98
KRT39-203ENST00000578078 NPATQ14207 1427 aa8.94□□□□□ -0.98
KRT39-203ENST00000578078 SCAF11Q99590 1463 aaKnown RBP8.94□□□□□ -0.98
KRT39-203ENST00000578078 FAM69CQ0P6D2 419 aa8.94□□□□□ -0.98
KRT39-203ENST00000578078 HIC1Q14526 733 aa8.94□□□□□ -0.98
KRT39-203ENST00000578078 PIK3C2BO00750 1634 aa8.93□□□□□ -0.98
KRT39-203ENST00000578078 SIGLEC1Q9BZZ2 1709 aa8.93□□□□□ -0.98
KRT39-203ENST00000578078 TPM2P07951 284 aa8.93□□□□□ -0.98
KRT39-203ENST00000578078 NCLP19338 710 aaKnown RBP8.93□□□□□ -0.98
KRT39-203ENST00000578078 TMF1P82094 1093 aa8.93□□□□□ -0.98
KRT39-203ENST00000578078 CCDC27Q2M243 656 aa8.93□□□□□ -0.98
KRT39-203ENST00000578078 FRAT1Q92837 279 aaPredicted RBP8.93□□□□□ -0.98
KRT39-203ENST00000578078 MAP7D2Q96T17 732 aa8.93□□□□□ -0.98
KRT39-203ENST00000578078 KIF13AQ9H1H9 1805 aa8.93□□□□□ -0.98
KRT39-203ENST00000578078 KDM5AP29375 1690 aaKnown RBP8.92□□□□□ -0.98
KRT39-203ENST00000578078 REREQ9P2R6 1566 aa8.92□□□□□ -0.98
KRT39-203ENST00000578078 FECHP22830 423 aa8.92□□□□□ -0.98
KRT39-203ENST00000578078 PREX1Q8TCU6 1659 aa8.92□□□□□ -0.98
KRT39-203ENST00000578078 SETBP1Q9Y6X0 1596 aa8.92□□□□□ -0.98
KRT39-203ENST00000578078 NRXN1Q9ULB1 1477 aa8.92□□□□□ -0.98
KRT39-203ENST00000578078 ARHGAP31Q2M1Z3 1444 aa8.92□□□□□ -0.98
KRT39-203ENST00000578078 YEATS2Q9ULM3 1422 aa8.92□□□□□ -0.98
KRT39-203ENST00000578078 DISP3Q9P2K9 1392 aa8.91□□□□□ -0.98
KRT39-203ENST00000578078 IRX6P78412 446 aaPredicted RBP8.91□□□□□ -0.98
KRT39-203ENST00000578078 REPIN1Q9BWE0 567 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms