RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 POTEEQ6S8J3 1075 aa10.57□□□□□ -0.72
SMARCE1-212ENST00000577721 NUTM2AQ8IVF1 878 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-212ENST00000577721 IRX2Q9BZI1 471 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-212ENST00000577721 C19orf44Q9H6X5 657 aa10.57□□□□□ -0.72
SMARCE1-212ENST00000577721 LHX6Q9UPM6 363 aa10.57□□□□□ -0.72
SMARCE1-212ENST00000577721 ROBO1Q9Y6N7 1651 aa10.57□□□□□ -0.72
SMARCE1-212ENST00000577721 NKTRP30414 1462 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-212ENST00000577721 SPATA31A6Q5VVP1 1343 aa10.56□□□□□ -0.72
SMARCE1-212ENST00000577721 ADGRB3O60242 1522 aa10.55□□□□□ -0.72
SMARCE1-212ENST00000577721 ARHGAP33O14559 1287 aa10.55□□□□□ -0.72
SMARCE1-212ENST00000577721 RGS20O76081 388 aa10.55□□□□□ -0.72
SMARCE1-212ENST00000577721 PHF8Q9UPP1 1060 aa10.55□□□□□ -0.72
SMARCE1-212ENST00000577721 XIRP1Q702N8 1843 aaKnown RBP10.55□□□□□ -0.72
SMARCE1-212ENST00000577721 ANKRD50Q9ULJ7 1429 aa10.55□□□□□ -0.72
SMARCE1-212ENST00000577721 RXRBP28702 533 aa10.54□□□□□ -0.72
SMARCE1-212ENST00000577721 AMOTL2Q9Y2J4 779 aa10.54□□□□□ -0.72
SMARCE1-212ENST00000577721 UPF1Q92900 1129 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMARCE1-212ENST00000577721 STAC3Q96MF2 364 aa10.53□□□□□ -0.72
SMARCE1-212ENST00000577721 ZFYVE9O95405 1425 aa10.52□□□□□ -0.73
SMARCE1-212ENST00000577721 NCOA3Q9Y6Q9 1424 aa10.52□□□□□ -0.73
SMARCE1-212ENST00000577721 ITGAEP38570 1179 aa10.52□□□□□ -0.73
SMARCE1-212ENST00000577721 RPRD2Q5VT52 1461 aaKnown RBP10.52□□□□□ -0.73
SMARCE1-212ENST00000577721 CROCC2H7BZ55 1655 aa10.52□□□□□ -0.73
SMARCE1-212ENST00000577721 KDM5AP29375 1690 aaKnown RBP10.51□□□□□ -0.73
SMARCE1-212ENST00000577721 PHLPP1O60346 1717 aa10.51□□□□□ -0.73
SMARCE1-212ENST00000577721 ZNF326Q5BKZ1 582 aaKnown RBP10.51□□□□□ -0.73
SMARCE1-212ENST00000577721 BRINP3Q76B58 766 aa10.51□□□□□ -0.73
SMARCE1-212ENST00000577721 NWD1Q149M9 1564 aa10.51□□□□□ -0.73
SMARCE1-212ENST00000577721 ADGRL2O95490 1459 aa10.5□□□□□ -0.73
SMARCE1-212ENST00000577721 PSDA5PKW4 1024 aaPredicted RBP10.5□□□□□ -0.73
SMARCE1-212ENST00000577721 TK2O00142 265 aa10.5□□□□□ -0.73
SMARCE1-212ENST00000577721 IFNLR1Q8IU57 520 aaPredicted RBP10.5□□□□□ -0.73
SMARCE1-212ENST00000577721 KCTD12Q96CX2 325 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-212ENST00000577721 PCDHGA4Q9Y5G9 962 aa10.5□□□□□ -0.73
SMARCE1-212ENST00000577721 NUP155O75694 1391 aa10.49□□□□□ -0.73
SMARCE1-212ENST00000577721 PIK3R4Q99570 1358 aa10.49□□□□□ -0.73
SMARCE1-212ENST00000577721 NLRP6P59044 892 aa10.48□□□□□ -0.73
SMARCE1-212ENST00000577721 LRRC59Q96AG4 307 aaKnown RBP10.48□□□□□ -0.73
SMARCE1-212ENST00000577721 C8orf37Q96NL8 207 aa10.48□□□□□ -0.73
SMARCE1-212ENST00000577721 AFF2P51816 1311 aa10.48□□□□□ -0.73
SMARCE1-212ENST00000577721 ADAMTS13Q76LX8 1427 aa10.48□□□□□ -0.73
SMARCE1-212ENST00000577721 LRP6O75581 1613 aa10.47□□□□□ -0.73
SMARCE1-212ENST00000577721 QTRT2Q9H974 415 aaKnown RBP10.47□□□□□ -0.73
SMARCE1-212ENST00000577721 SLC34A2O95436 690 aa10.46□□□□□ -0.73
SMARCE1-212ENST00000577721 TMEM131LA2VDJ0 1609 aa10.46□□□□□ -0.74
SMARCE1-212ENST00000577721 COL16A1Q07092 1604 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-212ENST00000577721 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-212ENST00000577721 C2orf72A6NCS6 295 aa10.45□□□□□ -0.74
SMARCE1-212ENST00000577721 RIOK3O14730 519 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-212ENST00000577721 HRO43593 1189 aa10.45□□□□□ -0.74
SMARCE1-212ENST00000577721 DDX17Q92841 729 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-212ENST00000577721 NGLY1Q96IV0 654 aa10.45□□□□□ -0.74
SMARCE1-212ENST00000577721 ZFP91Q96JP5 570 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-212ENST00000577721 SETD1AO15047 1707 aaKnown RBP10.44□□□□□ -0.74
SMARCE1-212ENST00000577721 PTPRUQ92729 1446 aa10.44□□□□□ -0.74
SMARCE1-212ENST00000577721 ADAMTS2O95450 1211 aa10.44□□□□□ -0.74
SMARCE1-212ENST00000577721 RBM6P78332 1123 aaKnown RBP10.44□□□□□ -0.74
SMARCE1-212ENST00000577721 CHD2O14647 1828 aaKnown RBP10.44□□□□□ -0.74
SMARCE1-212ENST00000577721 KIF3CO14782 793 aa10.43□□□□□ -0.74
SMARCE1-212ENST00000577721 VGFO15240 615 aaPredicted RBP10.43□□□□□ -0.74
SMARCE1-212ENST00000577721 PPARGC1BQ86YN6 1023 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-212ENST00000577721 GCC2Q8IWJ2 1684 aa10.43□□□□□ -0.74
SMARCE1-212ENST00000577721 TRPM2O94759 1503 aa10.43□□□□□ -0.74
SMARCE1-212ENST00000577721 ROCK1Q13464 1354 aa10.42□□□□□ -0.74
SMARCE1-212ENST00000577721 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-212ENST00000577721 AHDC1Q5TGY3 1603 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-212ENST00000577721 DIP2AQ14689 1571 aa10.42□□□□□ -0.74
SMARCE1-212ENST00000577721 METP08581 1390 aa10.41□□□□□ -0.74
SMARCE1-212ENST00000577721 DCCP43146 1447 aa10.41□□□□□ -0.74
SMARCE1-212ENST00000577721 SETD5Q9C0A6 1442 aa10.41□□□□□ -0.74
SMARCE1-212ENST00000577721 IFFO2Q5TF58 517 aa10.4□□□□□ -0.74
SMARCE1-212ENST00000577721 DMRTA1Q5VZB9 504 aa10.4□□□□□ -0.74
SMARCE1-212ENST00000577721 MST1RQ04912 1400 aa10.4□□□□□ -0.75
SMARCE1-212ENST00000577721 MYO5BQ9ULV0 1848 aa10.4□□□□□ -0.75
SMARCE1-212ENST00000577721 ASXL1Q8IXJ9 1541 aa10.39□□□□□ -0.75
SMARCE1-212ENST00000577721 PTPN5P54829 565 aa10.39□□□□□ -0.75
SMARCE1-212ENST00000577721 USP21Q9UK80 565 aa10.39□□□□□ -0.75
SMARCE1-212ENST00000577721 PNPLA6Q8IY17 1366 aa10.39□□□□□ -0.75
SMARCE1-212ENST00000577721 CDK12Q9NYV4 1490 aaPredicted RBP10.38□□□□□ -0.75
SMARCE1-212ENST00000577721 PSEN2P49810 448 aa10.38□□□□□ -0.75
SMARCE1-212ENST00000577721 ORAI2Q96SN7 254 aa10.38□□□□□ -0.75
SMARCE1-212ENST00000577721 UNC13BO14795 1591 aa10.38□□□□□ -0.75
SMARCE1-212ENST00000577721 E9PCH4 1651 aa10.38□□□□□ -0.75
SMARCE1-212ENST00000577721 SHPRHQ149N8 1683 aa10.38□□□□□ -0.75
SMARCE1-212ENST00000577721 TMC2Q8TDI7 906 aa10.37□□□□□ -0.75
SMARCE1-212ENST00000577721 TRPC5Q9UL62 973 aaPredicted RBP10.37□□□□□ -0.75
SMARCE1-212ENST00000577721 RGS12O14924 1447 aa10.36□□□□□ -0.75
SMARCE1-212ENST00000577721 ADGRL3Q9HAR2 1447 aa10.36□□□□□ -0.75
SMARCE1-212ENST00000577721 ESCO1Q5FWF5 840 aa10.35□□□□□ -0.75
SMARCE1-212ENST00000577721 FBXO22Q8NEZ5 403 aa10.35□□□□□ -0.75
SMARCE1-212ENST00000577721 IQGAP3Q86VI3 1631 aa10.35□□□□□ -0.75
SMARCE1-212ENST00000577721 C1orf167Q5SNV9 1468 aa10.35□□□□□ -0.75
SMARCE1-212ENST00000577721 A0A0G2JS52 829 aa10.34□□□□□ -0.75
SMARCE1-212ENST00000577721 PPP4R3BQ5MIZ7 849 aa10.34□□□□□ -0.75
SMARCE1-212ENST00000577721 ATAD2Q6PL18 1390 aa10.34□□□□□ -0.75
SMARCE1-212ENST00000577721 SETBP1Q9Y6X0 1596 aa10.34□□□□□ -0.75
SMARCE1-212ENST00000577721 SOS2Q07890 1332 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-212ENST00000577721 FNBP4Q8N3X1 1017 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-212ENST00000577721 ROBO2Q9HCK4 1378 aa10.32□□□□□ -0.76
SMARCE1-212ENST00000577721 NUTM2FA1L443 756 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms