RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 CTC1Q2NKJ3 1217 aa6.71□□□□□ -1.34
CDH8-204ENST00000577536 EHBP1Q8NDI1 1231 aa6.71□□□□□ -1.34
CDH8-204ENST00000577536 LILRB3O75022 631 aa6.7□□□□□ -1.34
CDH8-204ENST00000577536 SMCPP49901 116 aaPredicted RBP6.7□□□□□ -1.34
CDH8-204ENST00000577536 QPCTQ16769 361 aa6.7□□□□□ -1.34
CDH8-204ENST00000577536 BAP1Q92560 729 aa6.7□□□□□ -1.34
CDH8-204ENST00000577536 RSPH6AQ9H0K4 717 aa6.7□□□□□ -1.34
CDH8-204ENST00000577536 NUTM2BA6NNL0 878 aaPredicted RBP6.69□□□□□ -1.34
CDH8-204ENST00000577536 NUTM2EB1AL46 878 aaPredicted RBP6.69□□□□□ -1.34
CDH8-204ENST00000577536 CTHP32929 405 aa6.69□□□□□ -1.34
CDH8-204ENST00000577536 CLK2P49760 499 aaKnown RBP6.69□□□□□ -1.34
CDH8-204ENST00000577536 LINC01559Q495D7 138 aa6.69□□□□□ -1.34
CDH8-204ENST00000577536 NUTM2DQ5VT03 806 aaPredicted RBP6.69□□□□□ -1.34
CDH8-204ENST00000577536 NUTM2AQ8IVF1 878 aaPredicted RBP6.69□□□□□ -1.34
CDH8-204ENST00000577536 SIAH2O43255 324 aa6.68□□□□□ -1.34
CDH8-204ENST00000577536 ALDH1A1P00352 501 aa6.68□□□□□ -1.34
CDH8-204ENST00000577536 F12P00748 615 aaPredicted RBP6.68□□□□□ -1.34
CDH8-204ENST00000577536 ZNF511Q8NB15 262 aa6.68□□□□□ -1.34
CDH8-204ENST00000577536 HPS1Q92902 700 aa6.68□□□□□ -1.34
CDH8-204ENST00000577536 KDM4CQ9H3R0 1056 aa6.68□□□□□ -1.34
CDH8-204ENST00000577536 GPBP1L1Q9HC44 474 aaPredicted RBP6.68□□□□□ -1.34
CDH8-204ENST00000577536 MAP10Q9P2G4 905 aa6.68□□□□□ -1.34
CDH8-204ENST00000577536 PER1O15534 1290 aaPredicted RBP6.67□□□□□ -1.34
CDH8-204ENST00000577536 TSC1Q92574 1164 aa6.67□□□□□ -1.34
CDH8-204ENST00000577536 POLR3EQ9NVU0 708 aa6.67□□□□□ -1.34
CDH8-204ENST00000577536 RTL5Q5HYW3 569 aaPredicted RBP6.66□□□□□ -1.34
CDH8-204ENST00000577536 VARSP26640 1264 aaKnown RBP6.65□□□□□ -1.34
CDH8-204ENST00000577536 HELBQ8NG08 1087 aaPredicted RBP6.65□□□□□ -1.34
CDH8-204ENST00000577536 FAM117AQ9C073 453 aa6.65□□□□□ -1.34
CDH8-204ENST00000577536 SUZ12Q15022 739 aaKnown RBP6.64□□□□□ -1.35
CDH8-204ENST00000577536 SKIV2LQ15477 1246 aaKnown RBP6.64□□□□□ -1.35
CDH8-204ENST00000577536 DDRGK1Q96HY6 314 aa6.64□□□□□ -1.35
CDH8-204ENST00000577536 WASF2Q9Y6W5 498 aa6.64□□□□□ -1.35
CDH8-204ENST00000577536 TERTO14746 1132 aaKnown RBP6.63□□□□□ -1.35
CDH8-204ENST00000577536 SH3D19Q5HYK7 790 aa6.63□□□□□ -1.35
CDH8-204ENST00000577536 MPNDQ8N594 471 aa6.63□□□□□ -1.35
CDH8-204ENST00000577536 ATP13A2Q9NQ11 1180 aa6.63□□□□□ -1.35
CDH8-204ENST00000577536 TLL2Q9Y6L7 1015 aa6.63□□□□□ -1.35
CDH8-204ENST00000577536 PLEKHG3A1L390 1219 aa6.62□□□□□ -1.35
CDH8-204ENST00000577536 SNRPBP14678 240 aaKnown RBP6.62□□□□□ -1.35
CDH8-204ENST00000577536 FOXJ1Q92949 421 aa6.62□□□□□ -1.35
CDH8-204ENST00000577536 FAM181BA6NEQ2 426 aa6.61□□□□□ -1.35
CDH8-204ENST00000577536 ARMC2Q8NEN0 867 aa6.61□□□□□ -1.35
CDH8-204ENST00000577536 FAM174AQ8TBP5 190 aa6.61□□□□□ -1.35
CDH8-204ENST00000577536 CTDSPL2Q05D32 466 aa6.6□□□□□ -1.35
CDH8-204ENST00000577536 PROCA1Q8NCQ7 364 aaPredicted RBP6.6□□□□□ -1.35
CDH8-204ENST00000577536 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDH8-204ENST00000577536 AGERQ15109 404 aa6.59□□□□□ -1.35
CDH8-204ENST00000577536 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.35
CDH8-204ENST00000577536 FBXO31Q5XUX0 539 aaPredicted RBP6.59□□□□□ -1.35
CDH8-204ENST00000577536 BPHLQ86WA6 291 aaPredicted RBP6.59□□□□□ -1.35
CDH8-204ENST00000577536 TRIM47Q96LD4 638 aa6.59□□□□□ -1.35
CDH8-204ENST00000577536 SENP2Q9HC62 589 aa6.59□□□□□ -1.35
CDH8-204ENST00000577536 CAPN5O15484 640 aaPredicted RBP6.58□□□□□ -1.36
CDH8-204ENST00000577536 ADH1CP00326 375 aa6.58□□□□□ -1.36
CDH8-204ENST00000577536 NNTQ13423 1086 aa6.58□□□□□ -1.36
CDH8-204ENST00000577536 NBPF14Q5TI25 921 aa6.58□□□□□ -1.36
CDH8-204ENST00000577536 PPP2R2DQ66LE6 453 aa6.58□□□□□ -1.36
CDH8-204ENST00000577536 CDK15Q96Q40 435 aa6.58□□□□□ -1.36
CDH8-204ENST00000577536 ATP1B4Q9UN42 357 aaPredicted RBP6.58□□□□□ -1.36
CDH8-204ENST00000577536 ARID5BQ14865 1188 aa6.57□□□□□ -1.36
CDH8-204ENST00000577536 SH3RF1Q7Z6J0 888 aa6.57□□□□□ -1.36
CDH8-204ENST00000577536 LRRN4Q8WUT4 740 aa6.57□□□□□ -1.36
CDH8-204ENST00000577536 KIFC2Q96AC6 838 aa6.57□□□□□ -1.36
CDH8-204ENST00000577536 BMP1P13497 986 aa6.56□□□□□ -1.36
CDH8-204ENST00000577536 SH3BP5LQ7L8J4 393 aa6.56□□□□□ -1.36
CDH8-204ENST00000577536 ZSCAN1Q8NBB4 408 aa6.56□□□□□ -1.36
CDH8-204ENST00000577536 GPKOWQ92917 476 aaPredicted RBP eCLIP6.56□□□□□ -1.36
CDH8-204ENST00000577536 C1QTNF2Q9BXJ5 285 aa6.56□□□□□ -1.36
CDH8-204ENST00000577536 TRIM46Q7Z4K8 759 aa6.55□□□□□ -1.36
CDH8-204ENST00000577536 KLF16Q9BXK1 252 aaPredicted RBP6.55□□□□□ -1.36
CDH8-204ENST00000577536 AP1G2O75843 785 aa6.54□□□□□ -1.36
CDH8-204ENST00000577536 TIMP2P16035 220 aa6.54□□□□□ -1.36
CDH8-204ENST00000577536 GMPRP36959 345 aa6.54□□□□□ -1.36
CDH8-204ENST00000577536 GRM5P41594 1212 aa6.54□□□□□ -1.36
CDH8-204ENST00000577536 WDR4P57081 412 aaKnown RBP6.54□□□□□ -1.36
CDH8-204ENST00000577536 NR5A1Q13285 461 aa6.54□□□□□ -1.36
CDH8-204ENST00000577536 NEUROD2Q15784 382 aa6.54□□□□□ -1.36
CDH8-204ENST00000577536 GOPCQ9HD26 462 aa6.54□□□□□ -1.36
CDH8-204ENST00000577536 MAGEB6P1A0A0J9YX57 407 aa6.53□□□□□ -1.36
CDH8-204ENST00000577536 NR3C2P08235 984 aa6.53□□□□□ -1.36
CDH8-204ENST00000577536 NR6A1Q15406 480 aa6.53□□□□□ -1.36
CDH8-204ENST00000577536 PDXDC2PQ6P474 469 aa6.53□□□□□ -1.36
CDH8-204ENST00000577536 TRMT44Q8IYL2 757 aaKnown RBP6.53□□□□□ -1.36
CDH8-204ENST00000577536 CARD14Q9BXL6 1004 aa6.53□□□□□ -1.36
CDH8-204ENST00000577536 FKBPLQ9UIM3 349 aa6.53□□□□□ -1.36
CDH8-204ENST00000577536 MAP4K5Q9Y4K4 846 aa6.53□□□□□ -1.36
CDH8-204ENST00000577536 LORP23490 312 aaPredicted RBP6.52□□□□□ -1.37
CDH8-204ENST00000577536 RFC5P40937 340 aa6.52□□□□□ -1.37
CDH8-204ENST00000577536 ZIC2O95409 532 aaPredicted RBP6.51□□□□□ -1.37
CDH8-204ENST00000577536 USP17L8P0C7I0 530 aa6.51□□□□□ -1.37
CDH8-204ENST00000577536 BRPF1P55201 1214 aaPredicted RBP6.51□□□□□ -1.37
CDH8-204ENST00000577536 ERFEQ4G0M1 354 aa6.51□□□□□ -1.37
CDH8-204ENST00000577536 MRPL14Q6P1L8 145 aaKnown RBP6.51□□□□□ -1.37
CDH8-204ENST00000577536 VASH1Q7L8A9 365 aaPredicted RBP6.51□□□□□ -1.37
CDH8-204ENST00000577536 IL27Q8NEV9 243 aa6.51□□□□□ -1.37
CDH8-204ENST00000577536 SLC16A10Q8TF71 515 aa6.51□□□□□ -1.37
CDH8-204ENST00000577536 PCMTD1Q96MG8 357 aaPredicted RBP6.51□□□□□ -1.37
CDH8-204ENST00000577536 ZFP42Q96MM3 310 aa6.51□□□□□ -1.37
CDH8-204ENST00000577536 ARHGAP9Q9BRR9 750 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms