RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 SSH2Q76I76 1423 aa11.74□□□□□ -0.53
PRPF8-213ENST00000576407 NRKQ7Z2Y5 1582 aa11.74□□□□□ -0.53
PRPF8-213ENST00000576407 PER1O15534 1290 aaPredicted RBP11.73□□□□□ -0.53
PRPF8-213ENST00000576407 SOS2Q07890 1332 aaPredicted RBP11.73□□□□□ -0.53
PRPF8-213ENST00000576407 NSD3Q9BZ95 1437 aa11.73□□□□□ -0.53
PRPF8-213ENST00000576407 TRPM3Q9HCF6 1732 aaPredicted RBP11.73□□□□□ -0.53
PRPF8-213ENST00000576407 BRD4O60885 1362 aaPredicted RBP11.72□□□□□ -0.53
PRPF8-213ENST00000576407 TTC21BQ7Z4L5 1316 aa11.72□□□□□ -0.53
PRPF8-213ENST00000576407 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.72□□□□□ -0.53
PRPF8-213ENST00000576407 KNSTRNQ9Y448 316 aa11.72□□□□□ -0.53
PRPF8-213ENST00000576407 PHLPP1O60346 1717 aa11.72□□□□□ -0.53
PRPF8-213ENST00000576407 SBNO1A3KN83 1393 aa11.71□□□□□ -0.53
PRPF8-213ENST00000576407 PAK3O75914 559 aaPredicted RBP11.71□□□□□ -0.53
PRPF8-213ENST00000576407 CGNL1Q0VF96 1302 aa11.7□□□□□ -0.54
PRPF8-213ENST00000576407 TTC21AQ8NDW8 1320 aa11.7□□□□□ -0.54
PRPF8-213ENST00000576407 COL16A1Q07092 1604 aaPredicted RBP11.7□□□□□ -0.54
PRPF8-213ENST00000576407 TNS3Q68CZ2 1445 aa11.69□□□□□ -0.54
PRPF8-213ENST00000576407 PIK3C2AO00443 1686 aa11.69□□□□□ -0.54
PRPF8-213ENST00000576407 ALS2Q96Q42 1657 aa11.69□□□□□ -0.54
PRPF8-213ENST00000576407 SPATA31A3Q5VYP0 1347 aa11.69□□□□□ -0.54
PRPF8-213ENST00000576407 FYB1O15117 783 aa11.69□□□□□ -0.54
PRPF8-213ENST00000576407 AMER1Q5JTC6 1135 aaPredicted RBP11.69□□□□□ -0.54
PRPF8-213ENST00000576407 NME9Q86XW9 330 aa11.69□□□□□ -0.54
PRPF8-213ENST00000576407 KIF20BQ96Q89 1820 aa11.68□□□□□ -0.54
PRPF8-213ENST00000576407 LMOD2Q6P5Q4 547 aa11.68□□□□□ -0.54
PRPF8-213ENST00000576407 ABTB2Q8N961 1025 aa11.68□□□□□ -0.54
PRPF8-213ENST00000576407 LRRC59Q96AG4 307 aaKnown RBP11.68□□□□□ -0.54
PRPF8-213ENST00000576407 ZRANB1Q9UGI0 708 aa11.68□□□□□ -0.54
PRPF8-213ENST00000576407 HSPA1LP34931 641 aa11.67□□□□□ -0.54
PRPF8-213ENST00000576407 NUTM2GQ5VZR2 741 aa11.67□□□□□ -0.54
PRPF8-213ENST00000576407 GGNBP2Q9H3C7 697 aa11.67□□□□□ -0.54
PRPF8-213ENST00000576407 ARHGEF10O15013 1369 aa11.67□□□□□ -0.54
PRPF8-213ENST00000576407 NPC1L1Q9UHC9 1359 aa11.67□□□□□ -0.54
PRPF8-213ENST00000576407 SOCS7O14512 581 aa11.66□□□□□ -0.54
PRPF8-213ENST00000576407 NLRP6P59044 892 aa11.66□□□□□ -0.54
PRPF8-213ENST00000576407 CC2D1BQ5T0F9 858 aaKnown RBP11.66□□□□□ -0.54
PRPF8-213ENST00000576407 NSD2O96028 1365 aa11.66□□□□□ -0.54
PRPF8-213ENST00000576407 USP31Q70CQ4 1352 aa11.66□□□□□ -0.54
PRPF8-213ENST00000576407 CNGB1Q14028 1251 aaPredicted RBP11.65□□□□□ -0.54
PRPF8-213ENST00000576407 ILDR2Q71H61 639 aa11.65□□□□□ -0.54
PRPF8-213ENST00000576407 NLRP13Q86W25 1043 aa11.65□□□□□ -0.54
PRPF8-213ENST00000576407 COG3Q96JB2 828 aa11.65□□□□□ -0.54
PRPF8-213ENST00000576407 OVOS2A0A0J9YW53 1432 aa11.65□□□□□ -0.54
PRPF8-213ENST00000576407 OVOS2Q6IE36 1432 aa11.65□□□□□ -0.54
PRPF8-213ENST00000576407 ANKRD26Q9UPS8 1709 aa11.65□□□□□ -0.54
PRPF8-213ENST00000576407 MARF1Q9Y4F3 1742 aaKnown RBP11.65□□□□□ -0.54
PRPF8-213ENST00000576407 USP54Q70EL1 1684 aa11.65□□□□□ -0.55
PRPF8-213ENST00000576407 PLEKHG5O94827 1062 aa11.64□□□□□ -0.55
PRPF8-213ENST00000576407 PNPLA6Q8IY17 1366 aa11.64□□□□□ -0.55
PRPF8-213ENST00000576407 USP19O94966 1318 aa11.63□□□□□ -0.55
PRPF8-213ENST00000576407 MED1Q15648 1581 aaPredicted RBP11.63□□□□□ -0.55
PRPF8-213ENST00000576407 MORC1Q86VD1 984 aa11.63□□□□□ -0.55
PRPF8-213ENST00000576407 COL22A1Q8NFW1 1626 aaPredicted RBP11.63□□□□□ -0.55
PRPF8-213ENST00000576407 SHPRHQ149N8 1683 aa11.62□□□□□ -0.55
PRPF8-213ENST00000576407 SLIT3O75094 1523 aa11.62□□□□□ -0.55
PRPF8-213ENST00000576407 DIEXFQ68CQ4 756 aaKnown RBP11.62□□□□□ -0.55
PRPF8-213ENST00000576407 CABLES1Q8TDN4 633 aa11.62□□□□□ -0.55
PRPF8-213ENST00000576407 CRYBG1Q9Y4K1 1723 aa11.62□□□□□ -0.55
PRPF8-213ENST00000576407 JCADQ9P266 1359 aa11.62□□□□□ -0.55
PRPF8-213ENST00000576407 PHRF1Q9P1Y6 1649 aaKnown RBP11.61□□□□□ -0.55
PRPF8-213ENST00000576407 ABCA3Q99758 1704 aa11.6□□□□□ -0.55
PRPF8-213ENST00000576407 PARD3Q8TEW0 1356 aa11.6□□□□□ -0.55
PRPF8-213ENST00000576407 SOX12O15370 315 aa11.6□□□□□ -0.55
PRPF8-213ENST00000576407 GCP02774 474 aa11.6□□□□□ -0.55
PRPF8-213ENST00000576407 TNNT2P45379 298 aaPredicted RBP11.6□□□□□ -0.55
PRPF8-213ENST00000576407 PRKRIP1Q9H875 184 aaPredicted RBP11.6□□□□□ -0.55
PRPF8-213ENST00000576407 ANP32CO43423 234 aa11.59□□□□□ -0.55
PRPF8-213ENST00000576407 FBLN1P23142 703 aa11.59□□□□□ -0.55
PRPF8-213ENST00000576407 RALBP1Q15311 655 aa11.59□□□□□ -0.55
PRPF8-213ENST00000576407 KCNH5Q8NCM2 988 aa11.59□□□□□ -0.55
PRPF8-213ENST00000576407 NFAT5O94916 1531 aa11.59□□□□□ -0.55
PRPF8-213ENST00000576407 HAP1P54257 671 aaPredicted RBP11.58□□□□□ -0.56
PRPF8-213ENST00000576407 SPATA31A6Q5VVP1 1343 aa11.58□□□□□ -0.56
PRPF8-213ENST00000576407 AATKQ6ZMQ8 1374 aa11.57□□□□□ -0.56
PRPF8-213ENST00000576407 NUTM2BA6NNL0 878 aaPredicted RBP11.57□□□□□ -0.56
PRPF8-213ENST00000576407 NUTM2EB1AL46 878 aaPredicted RBP11.57□□□□□ -0.56
PRPF8-213ENST00000576407 ZC3H6P61129 1189 aaKnown RBP11.57□□□□□ -0.56
PRPF8-213ENST00000576407 NUTM2AQ8IVF1 878 aaPredicted RBP11.57□□□□□ -0.56
PRPF8-213ENST00000576407 PPP2R1AP30153 589 aa11.56□□□□□ -0.56
PRPF8-213ENST00000576407 RRS1Q15050 365 aaKnown RBP11.56□□□□□ -0.56
PRPF8-213ENST00000576407 MAP3K19Q56UN5 1328 aa11.56□□□□□ -0.56
PRPF8-213ENST00000576407 CPDO75976 1380 aa11.55□□□□□ -0.56
PRPF8-213ENST00000576407 KIAA0232Q92628 1395 aa11.55□□□□□ -0.56
PRPF8-213ENST00000576407 LTN1O94822 1766 aa11.55□□□□□ -0.56
PRPF8-213ENST00000576407 ARHGEF25Q86VW2 580 aa11.55□□□□□ -0.56
PRPF8-213ENST00000576407 POLKQ9UBT6 870 aa11.55□□□□□ -0.56
PRPF8-213ENST00000576407 EMILIN1Q9Y6C2 1016 aa11.55□□□□□ -0.56
PRPF8-213ENST00000576407 MAP2P11137 1827 aaKnown RBP11.55□□□□□ -0.56
PRPF8-213ENST00000576407 MYBBP1AQ9BQG0 1328 aaKnown RBP11.55□□□□□ -0.56
PRPF8-213ENST00000576407 LRP6O75581 1613 aa11.54□□□□□ -0.56
PRPF8-213ENST00000576407 ZBTB7CA1YPR0 619 aa11.54□□□□□ -0.56
PRPF8-213ENST00000576407 PPM1GO15355 546 aaPredicted RBP11.54□□□□□ -0.56
PRPF8-213ENST00000576407 ADAMTS2O95450 1211 aa11.54□□□□□ -0.56
PRPF8-213ENST00000576407 MTHFSP49914 203 aa11.54□□□□□ -0.56
PRPF8-213ENST00000576407 SMG6Q86US8 1419 aaKnown RBP11.53□□□□□ -0.56
PRPF8-213ENST00000576407 PEAK1Q9H792 1746 aa11.53□□□□□ -0.56
PRPF8-213ENST00000576407 AMPHP49418 695 aa11.53□□□□□ -0.56
PRPF8-213ENST00000576407 CHRNA2Q15822 529 aa11.53□□□□□ -0.56
PRPF8-213ENST00000576407 PRDM11Q9NQV5 511 aa11.53□□□□□ -0.56
PRPF8-213ENST00000576407 FAM83GA6ND36 823 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms