RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 PNPLA6Q8IY17 1366 aa18.22■□□□□ 0.51
RAB40B-211ENST00000576359 UBR1Q8IWV7 1749 aa18.22■□□□□ 0.51
RAB40B-211ENST00000576359 PDE3AQ14432 1141 aa18.21■□□□□ 0.51
RAB40B-211ENST00000576359 TXNDC2Q86VQ3 553 aa18.2■□□□□ 0.5
RAB40B-211ENST00000576359 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.2■□□□□ 0.5
RAB40B-211ENST00000576359 CPSF1Q10570 1443 aaKnown RBP18.19■□□□□ 0.5
RAB40B-211ENST00000576359 WASLO00401 505 aaPredicted RBP18.19■□□□□ 0.5
RAB40B-211ENST00000576359 PANK1Q8TE04 598 aa18.19■□□□□ 0.5
RAB40B-211ENST00000576359 TECPR2O15040 1411 aa18.19■□□□□ 0.5
RAB40B-211ENST00000576359 PRKCSHP14314 528 aaPredicted RBP18.19■□□□□ 0.5
RAB40B-211ENST00000576359 FBLN1P23142 703 aa18.19■□□□□ 0.5
RAB40B-211ENST00000576359 TMPOP42166 694 aaKnown RBP18.18■□□□□ 0.5
RAB40B-211ENST00000576359 CPS1P31327 1500 aa18.18■□□□□ 0.5
RAB40B-211ENST00000576359 PPIP5K1Q6PFW1 1433 aa18.18■□□□□ 0.5
RAB40B-211ENST00000576359 TRIM35Q9UPQ4 493 aa18.18■□□□□ 0.5
RAB40B-211ENST00000576359 CDC42BPGQ6DT37 1551 aa18.17■□□□□ 0.5
RAB40B-211ENST00000576359 DIAPH1O60610 1272 aaKnown RBP18.17■□□□□ 0.5
RAB40B-211ENST00000576359 FRAT1Q92837 279 aaPredicted RBP18.17■□□□□ 0.5
RAB40B-211ENST00000576359 TMEM2Q9UHN6 1383 aa18.17■□□□□ 0.5
RAB40B-211ENST00000576359 FAM135BQ49AJ0 1406 aa18.17■□□□□ 0.5
RAB40B-211ENST00000576359 MYH16Q9H6N6 1097 aa18.17■□□□□ 0.5
RAB40B-211ENST00000576359 TNNQ9UQP3 1299 aa18.17■□□□□ 0.5
RAB40B-211ENST00000576359 COG6Q9Y2V7 657 aa18.17■□□□□ 0.5
RAB40B-211ENST00000576359 CANXP27824 592 aaKnown RBP18.16■□□□□ 0.5
RAB40B-211ENST00000576359 BCL2L13Q9BXK5 485 aa18.16■□□□□ 0.5
RAB40B-211ENST00000576359 POLKQ9UBT6 870 aa18.16■□□□□ 0.5
RAB40B-211ENST00000576359 NCKAP5LQ9HCH0 1330 aa18.16■□□□□ 0.5
RAB40B-211ENST00000576359 EDC4Q6P2E9 1401 aaKnown RBP18.15■□□□□ 0.5
RAB40B-211ENST00000576359 NBR1Q14596 966 aa18.15■□□□□ 0.5
RAB40B-211ENST00000576359 IGHDP01880 384 aa18.15■□□□□ 0.5
RAB40B-211ENST00000576359 TSR2Q969E8 191 aaKnown RBP18.15■□□□□ 0.5
RAB40B-211ENST00000576359 LRRC7Q96NW7 1537 aa18.14■□□□□ 0.5
RAB40B-211ENST00000576359 MAPK8IP3Q9UPT6 1336 aa18.14■□□□□ 0.49
RAB40B-211ENST00000576359 MAP2P11137 1827 aaKnown RBP18.14■□□□□ 0.49
RAB40B-211ENST00000576359 RLBP1P12271 317 aa18.14■□□□□ 0.49
RAB40B-211ENST00000576359 ADAMTS13Q76LX8 1427 aa18.14■□□□□ 0.49
RAB40B-211ENST00000576359 SIRT1Q96EB6 747 aa18.14■□□□□ 0.49
RAB40B-211ENST00000576359 MON2Q7Z3U7 1717 aa18.14■□□□□ 0.49
RAB40B-211ENST00000576359 CLUAP1Q96AJ1 413 aa18.13■□□□□ 0.49
RAB40B-211ENST00000576359 NUDT16Q96DE0 195 aaKnown RBP18.13■□□□□ 0.49
RAB40B-211ENST00000576359 HDGFP51858 240 aaKnown RBP18.13■□□□□ 0.49
RAB40B-211ENST00000576359 NME9Q86XW9 330 aa18.13■□□□□ 0.49
RAB40B-211ENST00000576359 ZRANB1Q9UGI0 708 aa18.13■□□□□ 0.49
RAB40B-211ENST00000576359 ROBO2Q9HCK4 1378 aa18.12■□□□□ 0.49
RAB40B-211ENST00000576359 AKAP12Q02952 1782 aa18.11■□□□□ 0.49
RAB40B-211ENST00000576359 PPM1GO15355 546 aaPredicted RBP18.11■□□□□ 0.49
RAB40B-211ENST00000576359 PRR36Q9H6K5 1346 aa18.11■□□□□ 0.49
RAB40B-211ENST00000576359 RGS3P49796 1198 aa18.11■□□□□ 0.49
RAB40B-211ENST00000576359 LTKP29376 864 aa18.1■□□□□ 0.49
RAB40B-211ENST00000576359 RIPK4P57078 832 aa18.1■□□□□ 0.49
RAB40B-211ENST00000576359 EMILIN1Q9Y6C2 1016 aa18.1■□□□□ 0.49
RAB40B-211ENST00000576359 RSPH6AQ9H0K4 717 aa18.1■□□□□ 0.49
RAB40B-211ENST00000576359 CCDC61Q9Y6R9 512 aa18.1■□□□□ 0.49
RAB40B-211ENST00000576359 C3P01024 1663 aa18.1■□□□□ 0.49
RAB40B-211ENST00000576359 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.09■□□□□ 0.49
RAB40B-211ENST00000576359 CEBPAP49715 358 aaPredicted RBP18.09■□□□□ 0.49
RAB40B-211ENST00000576359 EXOSC9Q06265 439 aaKnown RBP18.09■□□□□ 0.49
RAB40B-211ENST00000576359 FAM161AQ3B820 660 aa18.09■□□□□ 0.49
RAB40B-211ENST00000576359 ITSN1Q15811 1721 aa18.09■□□□□ 0.49
RAB40B-211ENST00000576359 FCHSD2O94868 740 aa18.09■□□□□ 0.49
RAB40B-211ENST00000576359 C8orf34Q49A92 452 aa18.08■□□□□ 0.49
RAB40B-211ENST00000576359 IL16Q14005 1332 aa18.08■□□□□ 0.48
RAB40B-211ENST00000576359 PLEKHG1Q9ULL1 1385 aa18.08■□□□□ 0.48
RAB40B-211ENST00000576359 PRKAR2BP31323 418 aa18.07■□□□□ 0.48
RAB40B-211ENST00000576359 CT47B1P0C2W7 299 aaPredicted RBP18.07■□□□□ 0.48
RAB40B-211ENST00000576359 PNNQ9H307 717 aaKnown RBP18.07■□□□□ 0.48
RAB40B-211ENST00000576359 CDK12Q9NYV4 1490 aaPredicted RBP18.07■□□□□ 0.48
RAB40B-211ENST00000576359 AATKQ6ZMQ8 1374 aa18.06■□□□□ 0.48
RAB40B-211ENST00000576359 PCDHB15Q9Y5E8 787 aa18.05■□□□□ 0.48
RAB40B-211ENST00000576359 PTPRUQ92729 1446 aa18.05■□□□□ 0.48
RAB40B-211ENST00000576359 HMOX1P09601 288 aa18.05■□□□□ 0.48
RAB40B-211ENST00000576359 IL13P35225 146 aa18.05■□□□□ 0.48
RAB40B-211ENST00000576359 DDRGK1Q96HY6 314 aa18.05■□□□□ 0.48
RAB40B-211ENST00000576359 TOPAZ1Q8N9V7 1692 aa18.05■□□□□ 0.48
RAB40B-211ENST00000576359 PHACTR3Q96KR7 559 aa18.04■□□□□ 0.48
RAB40B-211ENST00000576359 NRKQ7Z2Y5 1582 aa18.04■□□□□ 0.48
RAB40B-211ENST00000576359 SSH1Q8WYL5 1049 aa18.03■□□□□ 0.48
RAB40B-211ENST00000576359 COG3Q96JB2 828 aa18.03■□□□□ 0.48
RAB40B-211ENST00000576359 RRS1Q15050 365 aaKnown RBP18.03■□□□□ 0.48
RAB40B-211ENST00000576359 ZKSCAN2Q63HK3 967 aa18.03■□□□□ 0.48
RAB40B-211ENST00000576359 SMC4Q9NTJ3 1288 aa18.03■□□□□ 0.48
RAB40B-211ENST00000576359 AAMPQ13685 434 aa18.02■□□□□ 0.48
RAB40B-211ENST00000576359 MVPQ14764 893 aaKnown RBP18.02■□□□□ 0.48
RAB40B-211ENST00000576359 SLC26A8Q96RN1 970 aa18.02■□□□□ 0.47
RAB40B-211ENST00000576359 ZNF692Q9BU19 519 aaPredicted RBP18.01■□□□□ 0.47
RAB40B-211ENST00000576359 SLIT1O75093 1534 aa18.01■□□□□ 0.47
RAB40B-211ENST00000576359 ARHGAP23Q9P227 1491 aa18■□□□□ 0.47
RAB40B-211ENST00000576359 TRIM27P14373 513 aa18■□□□□ 0.47
RAB40B-211ENST00000576359 NFE2L2Q16236 605 aa18■□□□□ 0.47
RAB40B-211ENST00000576359 DZIP1LQ8IYY4 767 aaKnown RBP18■□□□□ 0.47
RAB40B-211ENST00000576359 LAS1LQ9Y4W2 734 aaKnown RBP18■□□□□ 0.47
RAB40B-211ENST00000576359 DEKP35659 375 aaKnown RBP18■□□□□ 0.47
RAB40B-211ENST00000576359 RTL5Q5HYW3 569 aaPredicted RBP18■□□□□ 0.47
RAB40B-211ENST00000576359 PMFBP1Q8TBY8 1022 aa18■□□□□ 0.47
RAB40B-211ENST00000576359 VIRMAQ69YN4 1812 aaKnown RBP17.99■□□□□ 0.47
RAB40B-211ENST00000576359 FER1L4A9Z1Z3 1794 aa17.99■□□□□ 0.47
RAB40B-211ENST00000576359 NUTM2FA1L443 756 aa17.99■□□□□ 0.47
RAB40B-211ENST00000576359 ACEP12821 1306 aa17.98■□□□□ 0.47
RAB40B-211ENST00000576359 FTSJ3Q8IY81 847 aaKnown RBP17.98■□□□□ 0.47
RAB40B-211ENST00000576359 THUMPD2Q9BTF0 503 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms