RNA–Protein interactions for RNA: ENST00000575919.1

SLC52A1-205, Transcript of solute carrier family 52 member 1, humanhuman

TSL 5

Gene SLC52A1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-205ENST00000575919 SLIT1O75093 1534 aa19.67■□□□□ 0.74
SLC52A1-205ENST00000575919 ATP7BP35670 1465 aa19.67■□□□□ 0.74
SLC52A1-205ENST00000575919 ARHGAP23Q9P227 1491 aa19.67■□□□□ 0.74
SLC52A1-205ENST00000575919 WWC1Q8IX03 1113 aa19.67■□□□□ 0.74
SLC52A1-205ENST00000575919 CCDC136Q96JN2 1154 aa19.67■□□□□ 0.74
SLC52A1-205ENST00000575919 RIMS1Q86UR5 1692 aaKnown RBP19.67■□□□□ 0.74
SLC52A1-205ENST00000575919 TBX22Q9Y458 520 aa19.66■□□□□ 0.74
SLC52A1-205ENST00000575919 MED14O60244 1454 aa19.66■□□□□ 0.74
SLC52A1-205ENST00000575919 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.66■□□□□ 0.74
SLC52A1-205ENST00000575919 CPSF1Q10570 1443 aaKnown RBP19.65■□□□□ 0.74
SLC52A1-205ENST00000575919 KIF20BQ96Q89 1820 aa19.64■□□□□ 0.73
SLC52A1-205ENST00000575919 ANKRD26Q9UPS8 1709 aa19.63■□□□□ 0.73
SLC52A1-205ENST00000575919 TRMT2AQ8IZ69 625 aaKnown RBP19.63■□□□□ 0.73
SLC52A1-205ENST00000575919 POLKQ9UBT6 870 aa19.63■□□□□ 0.73
SLC52A1-205ENST00000575919 E9PSI1 815 aa19.62■□□□□ 0.73
SLC52A1-205ENST00000575919 DIAPH1O60610 1272 aaKnown RBP19.62■□□□□ 0.73
SLC52A1-205ENST00000575919 EDC4Q6P2E9 1401 aaKnown RBP19.61■□□□□ 0.73
SLC52A1-205ENST00000575919 C20orf194Q5TEA3 1177 aa19.61■□□□□ 0.73
SLC52A1-205ENST00000575919 EMILIN1Q9Y6C2 1016 aa19.61■□□□□ 0.73
SLC52A1-205ENST00000575919 ACEP12821 1306 aa19.6■□□□□ 0.73
SLC52A1-205ENST00000575919 KCNA6P17658 529 aa19.6■□□□□ 0.73
SLC52A1-205ENST00000575919 PMFBP1Q8TBY8 1022 aa19.6■□□□□ 0.73
SLC52A1-205ENST00000575919 CEP170BQ9Y4F5 1589 aaPredicted RBP19.6■□□□□ 0.73
SLC52A1-205ENST00000575919 NGEFQ8N5V2 710 aa19.59■□□□□ 0.73
SLC52A1-205ENST00000575919 COG3Q96JB2 828 aa19.59■□□□□ 0.73
SLC52A1-205ENST00000575919 ZNF692Q9BU19 519 aaPredicted RBP19.59■□□□□ 0.73
SLC52A1-205ENST00000575919 RRS1Q15050 365 aaKnown RBP19.58■□□□□ 0.73
SLC52A1-205ENST00000575919 RBM33Q96EV2 1170 aaKnown RBP19.58■□□□□ 0.73
SLC52A1-205ENST00000575919 COL3A1P02461 1466 aaPredicted RBP19.58■□□□□ 0.73
SLC52A1-205ENST00000575919 CDC42BPGQ6DT37 1551 aa19.58■□□□□ 0.73
SLC52A1-205ENST00000575919 CRBNQ96SW2 442 aa19.58■□□□□ 0.72
SLC52A1-205ENST00000575919 MAP2P11137 1827 aaKnown RBP19.57■□□□□ 0.72
SLC52A1-205ENST00000575919 BCAR3O75815 825 aa19.57■□□□□ 0.72
SLC52A1-205ENST00000575919 PLEKHF1Q96S99 279 aa19.57■□□□□ 0.72
SLC52A1-205ENST00000575919 IQSEC2Q5JU85 1478 aa19.56■□□□□ 0.72
SLC52A1-205ENST00000575919 ANKLE2Q86XL3 938 aa19.56■□□□□ 0.72
SLC52A1-205ENST00000575919 NKTRP30414 1462 aaKnown RBP19.56■□□□□ 0.72
SLC52A1-205ENST00000575919 PNPLA6Q8IY17 1366 aa19.55■□□□□ 0.72
SLC52A1-205ENST00000575919 MAPK8IP3Q9UPT6 1336 aa19.54■□□□□ 0.72
SLC52A1-205ENST00000575919 SOX12O15370 315 aa19.54■□□□□ 0.72
SLC52A1-205ENST00000575919 PHF23Q9BUL5 403 aaPredicted RBP19.54■□□□□ 0.72
SLC52A1-205ENST00000575919 TTC21BQ7Z4L5 1316 aa19.54■□□□□ 0.72
SLC52A1-205ENST00000575919 PLEKHG3A1L390 1219 aa19.54■□□□□ 0.72
SLC52A1-205ENST00000575919 HMOX1P09601 288 aa19.54■□□□□ 0.72
SLC52A1-205ENST00000575919 ITSN1Q15811 1721 aa19.53■□□□□ 0.72
SLC52A1-205ENST00000575919 MON2Q7Z3U7 1717 aa19.53■□□□□ 0.72
SLC52A1-205ENST00000575919 ADGRB2O60241 1585 aa19.53■□□□□ 0.72
SLC52A1-205ENST00000575919 TMPOP42166 694 aaKnown RBP19.52■□□□□ 0.72
SLC52A1-205ENST00000575919 AKAP12Q02952 1782 aa19.52■□□□□ 0.72
SLC52A1-205ENST00000575919 WDR63Q8IWG1 891 aa19.51■□□□□ 0.71
SLC52A1-205ENST00000575919 ADAMTSL3P82987 1691 aa19.51■□□□□ 0.71
SLC52A1-205ENST00000575919 PTCH1Q13635 1447 aa19.51■□□□□ 0.71
SLC52A1-205ENST00000575919 CCDC27Q2M243 656 aa19.51■□□□□ 0.71
SLC52A1-205ENST00000575919 NGDNQ8NEJ9 315 aaKnown RBP19.51■□□□□ 0.71
SLC52A1-205ENST00000575919 PRKAR2BP31323 418 aa19.5■□□□□ 0.71
SLC52A1-205ENST00000575919 RIPK4P57078 832 aa19.5■□□□□ 0.71
SLC52A1-205ENST00000575919 RGPD8O14715 1765 aaPredicted RBP19.5■□□□□ 0.71
SLC52A1-205ENST00000575919 TRIM35Q9UPQ4 493 aa19.49■□□□□ 0.71
SLC52A1-205ENST00000575919 DIP2AQ14689 1571 aa19.48■□□□□ 0.71
SLC52A1-205ENST00000575919 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.48■□□□□ 0.71
SLC52A1-205ENST00000575919 USP6P35125 1406 aa19.48■□□□□ 0.71
SLC52A1-205ENST00000575919 FCHSD2O94868 740 aa19.48■□□□□ 0.71
SLC52A1-205ENST00000575919 TSR2Q969E8 191 aaKnown RBP19.48■□□□□ 0.71
SLC52A1-205ENST00000575919 IL13P35225 146 aa19.47■□□□□ 0.71
SLC52A1-205ENST00000575919 SETD1BQ9UPS6 1966 aaKnown RBP19.47■□□□□ 0.71
SLC52A1-205ENST00000575919 PHACTR3Q96KR7 559 aa19.47■□□□□ 0.71
SLC52A1-205ENST00000575919 RSPH6AQ9H0K4 717 aa19.47■□□□□ 0.71
SLC52A1-205ENST00000575919 ANO8Q9HCE9 1232 aaPredicted RBP19.47■□□□□ 0.71
SLC52A1-205ENST00000575919 TOPAZ1Q8N9V7 1692 aa19.46■□□□□ 0.71
SLC52A1-205ENST00000575919 BCL2L13Q9BXK5 485 aa19.46■□□□□ 0.71
SLC52A1-205ENST00000575919 AATKQ6ZMQ8 1374 aa19.46■□□□□ 0.71
SLC52A1-205ENST00000575919 XRN1Q8IZH2 1706 aaKnown RBP19.45■□□□□ 0.7
SLC52A1-205ENST00000575919 FRAT1Q92837 279 aaPredicted RBP19.45■□□□□ 0.7
SLC52A1-205ENST00000575919 PNNQ9H307 717 aaKnown RBP19.45■□□□□ 0.7
SLC52A1-205ENST00000575919 MYH16Q9H6N6 1097 aa19.44■□□□□ 0.7
SLC52A1-205ENST00000575919 NOP58Q9Y2X3 529 aaKnown RBP19.44■□□□□ 0.7
SLC52A1-205ENST00000575919 NEFMP07197 916 aa19.43■□□□□ 0.7
SLC52A1-205ENST00000575919 NUTM2GQ5VZR2 741 aa19.43■□□□□ 0.7
SLC52A1-205ENST00000575919 PIK3R4Q99570 1358 aa19.43■□□□□ 0.7
SLC52A1-205ENST00000575919 CANXP27824 592 aaKnown RBP19.43■□□□□ 0.7
SLC52A1-205ENST00000575919 LRRC7Q96NW7 1537 aa19.43■□□□□ 0.7
SLC52A1-205ENST00000575919 RARSP54136 660 aaKnown RBP19.42■□□□□ 0.7
SLC52A1-205ENST00000575919 NRKQ7Z2Y5 1582 aa19.41■□□□□ 0.7
SLC52A1-205ENST00000575919 HSP90AB2PQ58FF8 381 aa19.41■□□□□ 0.7
SLC52A1-205ENST00000575919 CDK12Q9NYV4 1490 aaPredicted RBP19.41■□□□□ 0.7
SLC52A1-205ENST00000575919 NCBP3Q53F19 620 aaKnown RBP19.41■□□□□ 0.7
SLC52A1-205ENST00000575919 ZNF142P52746 1687 aaPredicted RBP19.4■□□□□ 0.7
SLC52A1-205ENST00000575919 PAK3O75914 559 aaPredicted RBP19.4■□□□□ 0.7
SLC52A1-205ENST00000575919 THUMPD2Q9BTF0 503 aaKnown RBP19.4■□□□□ 0.7
SLC52A1-205ENST00000575919 EXOSC9Q06265 439 aaKnown RBP19.4■□□□□ 0.7
SLC52A1-205ENST00000575919 LAS1LQ9Y4W2 734 aaKnown RBP19.4■□□□□ 0.7
SLC52A1-205ENST00000575919 OVOS2A0A0J9YW53 1432 aa19.4■□□□□ 0.7
SLC52A1-205ENST00000575919 OVOS2Q6IE36 1432 aa19.4■□□□□ 0.7
SLC52A1-205ENST00000575919 SSH2Q76I76 1423 aa19.4■□□□□ 0.7
SLC52A1-205ENST00000575919 EIF4A2Q14240 407 aaKnown RBP19.39■□□□□ 0.69
SLC52A1-205ENST00000575919 C14orf37Q86TY3 774 aa19.39■□□□□ 0.69
SLC52A1-205ENST00000575919 SKAP1Q86WV1 359 aa19.39■□□□□ 0.69
SLC52A1-205ENST00000575919 PANK1Q8TE04 598 aa19.39■□□□□ 0.69
SLC52A1-205ENST00000575919 CHD2O14647 1828 aaKnown RBP19.39■□□□□ 0.69
SLC52A1-205ENST00000575919 NLRP6P59044 892 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms