RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 RUNDC1Q96C34 613 aa20.82■□□□□ 0.92
USP43-204ENST00000573955 TCP11L2Q8N4U5 519 aa20.82■□□□□ 0.92
USP43-204ENST00000573955 NUDT16Q96DE0 195 aaKnown RBP20.82■□□□□ 0.92
USP43-204ENST00000573955 PPIP5K1Q6PFW1 1433 aa20.82■□□□□ 0.92
USP43-204ENST00000573955 PPM1GO15355 546 aaPredicted RBP20.81■□□□□ 0.92
USP43-204ENST00000573955 THEMISQ8N1K5 641 aaPredicted RBP20.81■□□□□ 0.92
USP43-204ENST00000573955 WWC1Q8IX03 1113 aa20.8■□□□□ 0.92
USP43-204ENST00000573955 C20orf194Q5TEA3 1177 aa20.79■□□□□ 0.92
USP43-204ENST00000573955 ZMYND15Q9H091 742 aa20.79■□□□□ 0.92
USP43-204ENST00000573955 PLEKHG1Q9ULL1 1385 aa20.79■□□□□ 0.92
USP43-204ENST00000573955 ZRANB1Q9UGI0 708 aa20.78■□□□□ 0.92
USP43-204ENST00000573955 FAM135BQ49AJ0 1406 aa20.77■□□□□ 0.92
USP43-204ENST00000573955 NME9Q86XW9 330 aa20.77■□□□□ 0.92
USP43-204ENST00000573955 CRBNQ96SW2 442 aa20.77■□□□□ 0.92
USP43-204ENST00000573955 TECPR2O15040 1411 aa20.76■□□□□ 0.91
USP43-204ENST00000573955 PTPRUQ92729 1446 aa20.76■□□□□ 0.91
USP43-204ENST00000573955 E9PSI1 815 aa20.76■□□□□ 0.91
USP43-204ENST00000573955 ATP7BP35670 1465 aa20.76■□□□□ 0.91
USP43-204ENST00000573955 AMOTL2Q9Y2J4 779 aa20.76■□□□□ 0.91
USP43-204ENST00000573955 PRR36Q9H6K5 1346 aa20.76■□□□□ 0.91
USP43-204ENST00000573955 CPS1P31327 1500 aa20.76■□□□□ 0.91
USP43-204ENST00000573955 TRMT2AQ8IZ69 625 aaKnown RBP20.75■□□□□ 0.91
USP43-204ENST00000573955 CCDC61Q9Y6R9 512 aa20.75■□□□□ 0.91
USP43-204ENST00000573955 KNDC1Q76NI1 1749 aa20.75■□□□□ 0.91
USP43-204ENST00000573955 RSPH6AQ9H0K4 717 aa20.74■□□□□ 0.91
USP43-204ENST00000573955 KIF20BQ96Q89 1820 aa20.74■□□□□ 0.91
USP43-204ENST00000573955 ANKRD26Q9UPS8 1709 aa20.74■□□□□ 0.91
USP43-204ENST00000573955 SIRT1Q96EB6 747 aa20.73■□□□□ 0.91
USP43-204ENST00000573955 IQSEC2Q5JU85 1478 aa20.73■□□□□ 0.91
USP43-204ENST00000573955 ADAMTSL3P82987 1691 aa20.73■□□□□ 0.91
USP43-204ENST00000573955 MED14O60244 1454 aa20.72■□□□□ 0.91
USP43-204ENST00000573955 NKTRP30414 1462 aaKnown RBP20.72■□□□□ 0.91
USP43-204ENST00000573955 CEP170BQ9Y4F5 1589 aaPredicted RBP20.72■□□□□ 0.91
USP43-204ENST00000573955 BCAR3O75815 825 aa20.72■□□□□ 0.91
USP43-204ENST00000573955 VSIG10Q8N0Z9 540 aa20.72■□□□□ 0.91
USP43-204ENST00000573955 CPSF1Q10570 1443 aaKnown RBP20.71■□□□□ 0.91
USP43-204ENST00000573955 DIAPH1O60610 1272 aaKnown RBP20.71■□□□□ 0.91
USP43-204ENST00000573955 NGEFQ8N5V2 710 aa20.71■□□□□ 0.91
USP43-204ENST00000573955 COL3A1P02461 1466 aaPredicted RBP20.7■□□□□ 0.9
USP43-204ENST00000573955 POLKQ9UBT6 870 aa20.7■□□□□ 0.9
USP43-204ENST00000573955 EMILIN1Q9Y6C2 1016 aa20.7■□□□□ 0.9
USP43-204ENST00000573955 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.7■□□□□ 0.9
USP43-204ENST00000573955 KCNA6P17658 529 aa20.7■□□□□ 0.9
USP43-204ENST00000573955 EDC4Q6P2E9 1401 aaKnown RBP20.7■□□□□ 0.9
USP43-204ENST00000573955 ARHGAP23Q9P227 1491 aa20.69■□□□□ 0.9
USP43-204ENST00000573955 SLIT1O75093 1534 aa20.68■□□□□ 0.9
USP43-204ENST00000573955 CDC42BPGQ6DT37 1551 aa20.67■□□□□ 0.9
USP43-204ENST00000573955 MAPK8IP3Q9UPT6 1336 aa20.67■□□□□ 0.9
USP43-204ENST00000573955 RRS1Q15050 365 aaKnown RBP20.66■□□□□ 0.9
USP43-204ENST00000573955 PLEKHF1Q96S99 279 aa20.66■□□□□ 0.9
USP43-204ENST00000573955 COG3Q96JB2 828 aa20.66■□□□□ 0.9
USP43-204ENST00000573955 ANKLE2Q86XL3 938 aa20.65■□□□□ 0.9
USP43-204ENST00000573955 TBX22Q9Y458 520 aa20.65■□□□□ 0.9
USP43-204ENST00000573955 ACEP12821 1306 aa20.65■□□□□ 0.9
USP43-204ENST00000573955 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.65■□□□□ 0.9
USP43-204ENST00000573955 HSPA2P54652 639 aa20.64■□□□□ 0.9
USP43-204ENST00000573955 PMFBP1Q8TBY8 1022 aa20.64■□□□□ 0.9
USP43-204ENST00000573955 PHF23Q9BUL5 403 aaPredicted RBP20.64■□□□□ 0.9
USP43-204ENST00000573955 HMOX1P09601 288 aa20.63■□□□□ 0.89
USP43-204ENST00000573955 PNPLA6Q8IY17 1366 aa20.63■□□□□ 0.89
USP43-204ENST00000573955 SOX12O15370 315 aa20.63■□□□□ 0.89
USP43-204ENST00000573955 TMPOP42166 694 aaKnown RBP20.63■□□□□ 0.89
USP43-204ENST00000573955 MAP2P11137 1827 aaKnown RBP20.63■□□□□ 0.89
USP43-204ENST00000573955 WDR63Q8IWG1 891 aa20.62■□□□□ 0.89
USP43-204ENST00000573955 BCL2L13Q9BXK5 485 aa20.62■□□□□ 0.89
USP43-204ENST00000573955 ITSN1Q15811 1721 aa20.61■□□□□ 0.89
USP43-204ENST00000573955 ZNF692Q9BU19 519 aaPredicted RBP20.61■□□□□ 0.89
USP43-204ENST00000573955 CCDC27Q2M243 656 aa20.61■□□□□ 0.89
USP43-204ENST00000573955 TSR2Q969E8 191 aaKnown RBP20.61■□□□□ 0.89
USP43-204ENST00000573955 CANXP27824 592 aaKnown RBP20.6■□□□□ 0.89
USP43-204ENST00000573955 FRAT1Q92837 279 aaPredicted RBP20.6■□□□□ 0.89
USP43-204ENST00000573955 ZBTB47Q9UFB7 747 aaPredicted RBP20.6■□□□□ 0.89
USP43-204ENST00000573955 MON2Q7Z3U7 1717 aa20.6■□□□□ 0.89
USP43-204ENST00000573955 PRKAR2BP31323 418 aa20.6■□□□□ 0.89
USP43-204ENST00000573955 SKAP1Q86WV1 359 aa20.6■□□□□ 0.89
USP43-204ENST00000573955 ADGRB2O60241 1585 aa20.6■□□□□ 0.89
USP43-204ENST00000573955 RIPK4P57078 832 aa20.59■□□□□ 0.89
USP43-204ENST00000573955 IPO9Q96P70 1041 aaKnown RBP20.59■□□□□ 0.89
USP43-204ENST00000573955 BRPF3Q9ULD4 1205 aa20.59■□□□□ 0.89
USP43-204ENST00000573955 TRIM35Q9UPQ4 493 aa20.59■□□□□ 0.89
USP43-204ENST00000573955 SETD1BQ9UPS6 1966 aaKnown RBP20.59■□□□□ 0.89
USP43-204ENST00000573955 AKAP12Q02952 1782 aa20.58■□□□□ 0.89
USP43-204ENST00000573955 TTC21BQ7Z4L5 1316 aa20.58■□□□□ 0.89
USP43-204ENST00000573955 ANP32AP39687 249 aaKnown RBP20.58■□□□□ 0.89
USP43-204ENST00000573955 MYH16Q9H6N6 1097 aa20.57■□□□□ 0.88
USP43-204ENST00000573955 LRRC7Q96NW7 1537 aa20.56■□□□□ 0.88
USP43-204ENST00000573955 PLEKHG3A1L390 1219 aa20.56■□□□□ 0.88
USP43-204ENST00000573955 FCHSD2O94868 740 aa20.55■□□□□ 0.88
USP43-204ENST00000573955 RARSP54136 660 aaKnown RBP20.55■□□□□ 0.88
USP43-204ENST00000573955 NGDNQ8NEJ9 315 aaKnown RBP20.55■□□□□ 0.88
USP43-204ENST00000573955 PHACTR3Q96KR7 559 aa20.55■□□□□ 0.88
USP43-204ENST00000573955 PTCH1Q13635 1447 aa20.55■□□□□ 0.88
USP43-204ENST00000573955 PANK1Q8TE04 598 aa20.55■□□□□ 0.88
USP43-204ENST00000573955 USP35Q9P2H5 1018 aa20.55■□□□□ 0.88
USP43-204ENST00000573955 IL13P35225 146 aa20.54■□□□□ 0.88
USP43-204ENST00000573955 USP6P35125 1406 aa20.53■□□□□ 0.88
USP43-204ENST00000573955 NEFMP07197 916 aa20.53■□□□□ 0.88
USP43-204ENST00000573955 TOPAZ1Q8N9V7 1692 aa20.53■□□□□ 0.88
USP43-204ENST00000573955 C14orf37Q86TY3 774 aa20.53■□□□□ 0.88
USP43-204ENST00000573955 PNNQ9H307 717 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms