RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 TOPAZ1Q8N9V7 1692 aa12.96□□□□□ -0.33
NPLOC4-208ENST00000572351 HSPA1LP34931 641 aa12.96□□□□□ -0.33
NPLOC4-208ENST00000572351 LRRC59Q96AG4 307 aaKnown RBP12.96□□□□□ -0.33
NPLOC4-208ENST00000572351 KNSTRNQ9Y448 316 aa12.96□□□□□ -0.33
NPLOC4-208ENST00000572351 CD163L1Q9NR16 1453 aa12.96□□□□□ -0.34
NPLOC4-208ENST00000572351 NSD3Q9BZ95 1437 aa12.96□□□□□ -0.34
NPLOC4-208ENST00000572351 SBNO1A3KN83 1393 aa12.95□□□□□ -0.34
NPLOC4-208ENST00000572351 BRD4O60885 1362 aaPredicted RBP12.95□□□□□ -0.34
NPLOC4-208ENST00000572351 TTC21BQ7Z4L5 1316 aa12.95□□□□□ -0.34
NPLOC4-208ENST00000572351 PLEKHG5O94827 1062 aa12.95□□□□□ -0.34
NPLOC4-208ENST00000572351 ABTB2Q8N961 1025 aa12.95□□□□□ -0.34
NPLOC4-208ENST00000572351 EDC4Q6P2E9 1401 aaKnown RBP12.95□□□□□ -0.34
NPLOC4-208ENST00000572351 TTC21AQ8NDW8 1320 aa12.94□□□□□ -0.34
NPLOC4-208ENST00000572351 PXDNQ92626 1479 aa12.94□□□□□ -0.34
NPLOC4-208ENST00000572351 CARD14Q9BXL6 1004 aa12.94□□□□□ -0.34
NPLOC4-208ENST00000572351 AHDC1Q5TGY3 1603 aaPredicted RBP12.94□□□□□ -0.34
NPLOC4-208ENST00000572351 TNS3Q68CZ2 1445 aa12.94□□□□□ -0.34
NPLOC4-208ENST00000572351 CGNL1Q0VF96 1302 aa12.93□□□□□ -0.34
NPLOC4-208ENST00000572351 SPATA31A3Q5VYP0 1347 aa12.93□□□□□ -0.34
NPLOC4-208ENST00000572351 NUTM2GQ5VZR2 741 aa12.93□□□□□ -0.34
NPLOC4-208ENST00000572351 ARHGEF10O15013 1369 aa12.93□□□□□ -0.34
NPLOC4-208ENST00000572351 HAP1P54257 671 aaPredicted RBP12.92□□□□□ -0.34
NPLOC4-208ENST00000572351 NLRP6P59044 892 aa12.92□□□□□ -0.34
NPLOC4-208ENST00000572351 CNGB1Q14028 1251 aaPredicted RBP12.92□□□□□ -0.34
NPLOC4-208ENST00000572351 NME9Q86XW9 330 aa12.92□□□□□ -0.34
NPLOC4-208ENST00000572351 SSH2Q76I76 1423 aa12.91□□□□□ -0.34
NPLOC4-208ENST00000572351 COG3Q96JB2 828 aa12.91□□□□□ -0.34
NPLOC4-208ENST00000572351 RGPD8O14715 1765 aaPredicted RBP12.9□□□□□ -0.34
NPLOC4-208ENST00000572351 NLRP13Q86W25 1043 aa12.9□□□□□ -0.34
NPLOC4-208ENST00000572351 GGNBP2Q9H3C7 697 aa12.9□□□□□ -0.34
NPLOC4-208ENST00000572351 NHSL1Q5SYE7 1610 aa12.9□□□□□ -0.34
NPLOC4-208ENST00000572351 JCADQ9P266 1359 aa12.9□□□□□ -0.34
NPLOC4-208ENST00000572351 MYOM1P52179 1685 aa12.89□□□□□ -0.35
NPLOC4-208ENST00000572351 CC2D1BQ5T0F9 858 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-208ENST00000572351 PHLPP1O60346 1717 aa12.88□□□□□ -0.35
NPLOC4-208ENST00000572351 FYB1O15117 783 aa12.88□□□□□ -0.35
NPLOC4-208ENST00000572351 SOX12O15370 315 aa12.88□□□□□ -0.35
NPLOC4-208ENST00000572351 PER1O15534 1290 aaPredicted RBP12.88□□□□□ -0.35
NPLOC4-208ENST00000572351 ZRANB1Q9UGI0 708 aa12.88□□□□□ -0.35
NPLOC4-208ENST00000572351 PNPLA6Q8IY17 1366 aa12.88□□□□□ -0.35
NPLOC4-208ENST00000572351 NSD2O96028 1365 aa12.87□□□□□ -0.35
NPLOC4-208ENST00000572351 NUTM2BA6NNL0 878 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-208ENST00000572351 NUTM2EB1AL46 878 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-208ENST00000572351 NUTM2AQ8IVF1 878 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-208ENST00000572351 CABLES1Q8TDN4 633 aa12.87□□□□□ -0.35
NPLOC4-208ENST00000572351 COL16A1Q07092 1604 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-208ENST00000572351 USP31Q70CQ4 1352 aa12.86□□□□□ -0.35
NPLOC4-208ENST00000572351 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
NPLOC4-208ENST00000572351 MORC1Q86VD1 984 aa12.86□□□□□ -0.35
NPLOC4-208ENST00000572351 ILDR1Q86SU0 546 aaPredicted RBP12.85□□□□□ -0.35
NPLOC4-208ENST00000572351 KCNH5Q8NCM2 988 aa12.85□□□□□ -0.35
NPLOC4-208ENST00000572351 NRKQ7Z2Y5 1582 aa12.85□□□□□ -0.35
NPLOC4-208ENST00000572351 SPATA31A6Q5VVP1 1343 aa12.85□□□□□ -0.35
NPLOC4-208ENST00000572351 MON2Q7Z3U7 1717 aa12.85□□□□□ -0.35
NPLOC4-208ENST00000572351 AKAP12Q02952 1782 aa12.84□□□□□ -0.35
NPLOC4-208ENST00000572351 ZBTB7CA1YPR0 619 aa12.84□□□□□ -0.35
NPLOC4-208ENST00000572351 TNNT2P45379 298 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-208ENST00000572351 USP19O94966 1318 aa12.84□□□□□ -0.35
NPLOC4-208ENST00000572351 TRPM3Q9HCF6 1732 aaPredicted RBP12.83□□□□□ -0.36
NPLOC4-208ENST00000572351 OVOS2A0A0J9YW53 1432 aa12.83□□□□□ -0.36
NPLOC4-208ENST00000572351 OVOS2Q6IE36 1432 aa12.83□□□□□ -0.36
NPLOC4-208ENST00000572351 ADAMTS2O95450 1211 aa12.83□□□□□ -0.36
NPLOC4-208ENST00000572351 GCP02774 474 aa12.83□□□□□ -0.36
NPLOC4-208ENST00000572351 MEX3CQ5U5Q3 659 aaKnown RBP12.83□□□□□ -0.36
NPLOC4-208ENST00000572351 NPC1L1Q9UHC9 1359 aa12.82□□□□□ -0.36
NPLOC4-208ENST00000572351 ZC3H6P61129 1189 aaKnown RBP12.81□□□□□ -0.36
NPLOC4-208ENST00000572351 PRDM11Q9NQV5 511 aa12.81□□□□□ -0.36
NPLOC4-208ENST00000572351 PIK3C2AO00443 1686 aa12.8□□□□□ -0.36
NPLOC4-208ENST00000572351 ANP32CO43423 234 aa12.8□□□□□ -0.36
NPLOC4-208ENST00000572351 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
NPLOC4-208ENST00000572351 ALS2Q96Q42 1657 aa12.8□□□□□ -0.36
NPLOC4-208ENST00000572351 MED1Q15648 1581 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-208ENST00000572351 PPM1GO15355 546 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-208ENST00000572351 RALBP1Q15311 655 aa12.79□□□□□ -0.36
NPLOC4-208ENST00000572351 KIAA0232Q92628 1395 aa12.79□□□□□ -0.36
NPLOC4-208ENST00000572351 FBLN1P23142 703 aa12.78□□□□□ -0.36
NPLOC4-208ENST00000572351 AMPHP49418 695 aa12.78□□□□□ -0.36
NPLOC4-208ENST00000572351 RRS1Q15050 365 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-208ENST00000572351 DIEXFQ68CQ4 756 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-208ENST00000572351 C8orf37Q96NL8 207 aa12.78□□□□□ -0.36
NPLOC4-208ENST00000572351 SLIT3O75094 1523 aa12.78□□□□□ -0.36
NPLOC4-208ENST00000572351 COL22A1Q8NFW1 1626 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-208ENST00000572351 SHPRHQ149N8 1683 aa12.77□□□□□ -0.37
NPLOC4-208ENST00000572351 CHRNA2Q15822 529 aa12.76□□□□□ -0.37
NPLOC4-208ENST00000572351 ARHGEF25Q86VW2 580 aa12.76□□□□□ -0.37
NPLOC4-208ENST00000572351 NGLY1Q96IV0 654 aa12.76□□□□□ -0.37
NPLOC4-208ENST00000572351 MAP3K19Q56UN5 1328 aa12.76□□□□□ -0.37
NPLOC4-208ENST00000572351 CPDO75976 1380 aa12.76□□□□□ -0.37
NPLOC4-208ENST00000572351 AATKQ6ZMQ8 1374 aa12.76□□□□□ -0.37
NPLOC4-208ENST00000572351 PARD3Q8TEW0 1356 aa12.76□□□□□ -0.37
NPLOC4-208ENST00000572351 PRKRIP1Q9H875 184 aaPredicted RBP12.75□□□□□ -0.37
NPLOC4-208ENST00000572351 EMILIN1Q9Y6C2 1016 aa12.75□□□□□ -0.37
NPLOC4-208ENST00000572351 LRP6O75581 1613 aa12.74□□□□□ -0.37
NPLOC4-208ENST00000572351 FAM83GA6ND36 823 aa12.74□□□□□ -0.37
NPLOC4-208ENST00000572351 PPP2R1AP30153 589 aa12.74□□□□□ -0.37
NPLOC4-208ENST00000572351 HOXD11P31277 338 aaPredicted RBP12.74□□□□□ -0.37
NPLOC4-208ENST00000572351 POLKQ9UBT6 870 aa12.74□□□□□ -0.37
NPLOC4-208ENST00000572351 KIF20BQ96Q89 1820 aa12.74□□□□□ -0.37
NPLOC4-208ENST00000572351 NFAT5O94916 1531 aa12.73□□□□□ -0.37
NPLOC4-208ENST00000572351 MYBBP1AQ9BQG0 1328 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms