RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 TOPAZ1Q8N9V7 1692 aa17.99■□□□□ 0.47
TVP23B-204ENST00000571018 NGLY1Q96IV0 654 aa17.99■□□□□ 0.47
TVP23B-204ENST00000571018 ACEP12821 1306 aa17.98■□□□□ 0.47
TVP23B-204ENST00000571018 TRPM3Q9HCF6 1732 aaPredicted RBP17.98■□□□□ 0.47
TVP23B-204ENST00000571018 LMOD2Q6P5Q4 547 aa17.98■□□□□ 0.47
TVP23B-204ENST00000571018 SBNO2Q9Y2G9 1366 aa17.98■□□□□ 0.47
TVP23B-204ENST00000571018 CCER1Q8TC90 406 aaPredicted RBP17.97■□□□□ 0.47
TVP23B-204ENST00000571018 PPIP5K1Q6PFW1 1433 aa17.97■□□□□ 0.47
TVP23B-204ENST00000571018 FNBP4Q8N3X1 1017 aaPredicted RBP17.96■□□□□ 0.47
TVP23B-204ENST00000571018 CABLES1Q8TDN4 633 aa17.95■□□□□ 0.46
TVP23B-204ENST00000571018 ALS2Q96Q42 1657 aa17.94■□□□□ 0.46
TVP23B-204ENST00000571018 PAK3O75914 559 aaPredicted RBP17.94■□□□□ 0.46
TVP23B-204ENST00000571018 CABP1Q9NZU7 370 aa17.94■□□□□ 0.46
TVP23B-204ENST00000571018 HAP1P54257 671 aaPredicted RBP17.93■□□□□ 0.46
TVP23B-204ENST00000571018 USP21Q9UK80 565 aa17.93■□□□□ 0.46
TVP23B-204ENST00000571018 MARF1Q9Y4F3 1742 aaKnown RBP17.92■□□□□ 0.46
TVP23B-204ENST00000571018 QTRT2Q9H974 415 aaKnown RBP17.92■□□□□ 0.46
TVP23B-204ENST00000571018 RXRBP28702 533 aa17.91■□□□□ 0.46
TVP23B-204ENST00000571018 ATAD2Q6PL18 1390 aa17.91■□□□□ 0.46
TVP23B-204ENST00000571018 PLEKHG5O94827 1062 aa17.9■□□□□ 0.46
TVP23B-204ENST00000571018 BRD4O60885 1362 aaPredicted RBP17.9■□□□□ 0.46
TVP23B-204ENST00000571018 BCL9LQ86UU0 1499 aa17.89■□□□□ 0.45
TVP23B-204ENST00000571018 ST20-MTHFSA0A0A6YYL1 179 aa17.89■□□□□ 0.45
TVP23B-204ENST00000571018 ABCA3Q99758 1704 aa17.89■□□□□ 0.45
TVP23B-204ENST00000571018 SLC24A1O60721 1099 aa17.88■□□□□ 0.45
TVP23B-204ENST00000571018 RBM6P78332 1123 aaKnown RBP17.88■□□□□ 0.45
TVP23B-204ENST00000571018 TESK2Q96S53 571 aa17.88■□□□□ 0.45
TVP23B-204ENST00000571018 TRPC5Q9UL62 973 aaPredicted RBP17.88■□□□□ 0.45
TVP23B-204ENST00000571018 SLIT2O94813 1529 aa17.88■□□□□ 0.45
TVP23B-204ENST00000571018 PUS7Q96PZ0 661 aaKnown RBP17.87■□□□□ 0.45
TVP23B-204ENST00000571018 ZNF692Q9BU19 519 aaPredicted RBP17.87■□□□□ 0.45
TVP23B-204ENST00000571018 USP6P35125 1406 aa17.87■□□□□ 0.45
TVP23B-204ENST00000571018 ABTB2Q8N961 1025 aa17.86■□□□□ 0.45
TVP23B-204ENST00000571018 ATRNO75882 1429 aa17.86■□□□□ 0.45
TVP23B-204ENST00000571018 CDK12Q9NYV4 1490 aaPredicted RBP17.86■□□□□ 0.45
TVP23B-204ENST00000571018 FAM83GA6ND36 823 aa17.85■□□□□ 0.45
TVP23B-204ENST00000571018 SSH2Q76I76 1423 aa17.85■□□□□ 0.45
TVP23B-204ENST00000571018 UNC5CLQ8IV45 518 aa17.85■□□□□ 0.45
TVP23B-204ENST00000571018 USP47Q96K76 1375 aa17.85■□□□□ 0.45
TVP23B-204ENST00000571018 CRYBG1Q9Y4K1 1723 aa17.85■□□□□ 0.45
TVP23B-204ENST00000571018 CPSF1Q10570 1443 aaKnown RBP17.84■□□□□ 0.45
TVP23B-204ENST00000571018 NUTM2GQ5VZR2 741 aa17.84■□□□□ 0.45
TVP23B-204ENST00000571018 NLRP13Q86W25 1043 aa17.83■□□□□ 0.44
TVP23B-204ENST00000571018 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.82■□□□□ 0.44
TVP23B-204ENST00000571018 USP19O94966 1318 aa17.81■□□□□ 0.44
TVP23B-204ENST00000571018 GJD4Q96KN9 370 aaPredicted RBP17.81■□□□□ 0.44
TVP23B-204ENST00000571018 PHRF1Q9P1Y6 1649 aaKnown RBP17.8■□□□□ 0.44
TVP23B-204ENST00000571018 TTC21BQ7Z4L5 1316 aa17.8■□□□□ 0.44
TVP23B-204ENST00000571018 SLC12A5Q9H2X9 1139 aa17.8■□□□□ 0.44
TVP23B-204ENST00000571018 U3KPZ7 1027 aaPredicted RBP17.8■□□□□ 0.44
TVP23B-204ENST00000571018 NWD2Q9ULI1 1742 aa17.8■□□□□ 0.44
TVP23B-204ENST00000571018 RGS12O14924 1447 aa17.8■□□□□ 0.44
TVP23B-204ENST00000571018 KTN1Q86UP2 1357 aaKnown RBP17.79■□□□□ 0.44
TVP23B-204ENST00000571018 AKAP12Q02952 1782 aa17.79■□□□□ 0.44
TVP23B-204ENST00000571018 MYCNP04198 464 aaPredicted RBP17.79■□□□□ 0.44
TVP23B-204ENST00000571018 TMF1P82094 1093 aa17.79■□□□□ 0.44
TVP23B-204ENST00000571018 TMC1Q8TDI8 760 aa17.79■□□□□ 0.44
TVP23B-204ENST00000571018 PRDM11Q9NQV5 511 aa17.79■□□□□ 0.44
TVP23B-204ENST00000571018 PLCH1Q4KWH8 1693 aa17.79■□□□□ 0.44
TVP23B-204ENST00000571018 COL14A1Q05707 1796 aaKnown RBP17.79■□□□□ 0.44
TVP23B-204ENST00000571018 KIAA0232Q92628 1395 aa17.79■□□□□ 0.44
TVP23B-204ENST00000571018 TTC21AQ8NDW8 1320 aa17.78■□□□□ 0.44
TVP23B-204ENST00000571018 CD163L1Q9NR16 1453 aa17.78■□□□□ 0.44
TVP23B-204ENST00000571018 GCP02774 474 aa17.78■□□□□ 0.44
TVP23B-204ENST00000571018 NLRP6P59044 892 aa17.78■□□□□ 0.44
TVP23B-204ENST00000571018 ZC3H6P61129 1189 aaKnown RBP17.78■□□□□ 0.44
TVP23B-204ENST00000571018 VPS72Q15906 364 aa17.78■□□□□ 0.44
TVP23B-204ENST00000571018 BTG4Q9NY30 223 aa17.78■□□□□ 0.44
TVP23B-204ENST00000571018 NINLQ9Y2I6 1382 aa17.77■□□□□ 0.43
TVP23B-204ENST00000571018 NRKQ7Z2Y5 1582 aa17.76■□□□□ 0.43
TVP23B-204ENST00000571018 HDGFL2Q7Z4V5 671 aaPredicted RBP17.76■□□□□ 0.43
TVP23B-204ENST00000571018 TERF2IPQ9NYB0 399 aa17.76■□□□□ 0.43
TVP23B-204ENST00000571018 CPDO75976 1380 aa17.76■□□□□ 0.43
TVP23B-204ENST00000571018 PIK3C2AO00443 1686 aa17.75■□□□□ 0.43
TVP23B-204ENST00000571018 RNF39Q9H2S5 420 aa17.75■□□□□ 0.43
TVP23B-204ENST00000571018 MON2Q7Z3U7 1717 aa17.75■□□□□ 0.43
TVP23B-204ENST00000571018 GLI3P10071 1580 aa17.74■□□□□ 0.43
TVP23B-204ENST00000571018 SLIT3O75094 1523 aa17.74■□□□□ 0.43
TVP23B-204ENST00000571018 CHRNA2Q15822 529 aa17.74■□□□□ 0.43
TVP23B-204ENST00000571018 NRAPQ86VF7 1730 aa17.74■□□□□ 0.43
TVP23B-204ENST00000571018 CDCA8Q53HL2 280 aa17.73■□□□□ 0.43
TVP23B-204ENST00000571018 CCDC9Q9Y3X0 531 aaKnown RBP17.73■□□□□ 0.43
TVP23B-204ENST00000571018 A0A1W2PP64 1363 aa17.73■□□□□ 0.43
TVP23B-204ENST00000571018 EDC4Q6P2E9 1401 aaKnown RBP17.72■□□□□ 0.43
TVP23B-204ENST00000571018 ONECUT3O60422 494 aaPredicted RBP17.71■□□□□ 0.43
TVP23B-204ENST00000571018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.71■□□□□ 0.433e-6■■■■□ 22.5
TVP23B-204ENST00000571018 USP31Q70CQ4 1352 aa17.7■□□□□ 0.42
TVP23B-204ENST00000571018 EIF4G2P78344 907 aaKnown RBP eCLIP17.7■□□□□ 0.42
TVP23B-204ENST00000571018 KCNH5Q8NCM2 988 aa17.7■□□□□ 0.42
TVP23B-204ENST00000571018 NME9Q86XW9 330 aa17.69■□□□□ 0.42
TVP23B-204ENST00000571018 SPATA31A5Q5VU36 1347 aa17.69■□□□□ 0.42
TVP23B-204ENST00000571018 SPATA31A7Q8IWB4 1347 aa17.69■□□□□ 0.42
TVP23B-204ENST00000571018 ANKRD36BQ8N2N9 1353 aa17.68■□□□□ 0.42
TVP23B-204ENST00000571018 LMO7Q8WWI1 1683 aa17.68■□□□□ 0.42
TVP23B-204ENST00000571018 CAMTA1Q9Y6Y1 1673 aa17.68■□□□□ 0.42
TVP23B-204ENST00000571018 UPF1Q92900 1129 aaKnown RBP eCLIP17.68■□□□□ 0.42
TVP23B-204ENST00000571018 ZRANB1Q9UGI0 708 aa17.68■□□□□ 0.42
TVP23B-204ENST00000571018 AATKQ6ZMQ8 1374 aa17.67■□□□□ 0.42
TVP23B-204ENST00000571018 HSPA5P11021 654 aaKnown RBP17.67■□□□□ 0.42
TVP23B-204ENST00000571018 EVA1CP58658 441 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms