RNA–Protein interactions for RNA: ENST00000570989.1

ITGA3-216, Transcript of integrin subunit alpha 3, humanhuman

Gene ITGA3, Length 2,495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-216ENST00000570989 PMFBP1Q8TBY8 1022 aa18.46■□□□□ 0.55
ITGA3-216ENST00000570989 POLR3AO14802 1390 aaPredicted RBP18.46■□□□□ 0.55
ITGA3-216ENST00000570989 A2ML1A8K2U0 1454 aa18.46■□□□□ 0.55
ITGA3-216ENST00000570989 STAG3Q9UJ98 1225 aa18.46■□□□□ 0.55
ITGA3-216ENST00000570989 IQSEC2Q5JU85 1478 aa18.46■□□□□ 0.55
ITGA3-216ENST00000570989 UPF2Q9HAU5 1272 aaKnown RBP18.45■□□□□ 0.54
ITGA3-216ENST00000570989 SETD1BQ9UPS6 1966 aaKnown RBP18.44■□□□□ 0.54
ITGA3-216ENST00000570989 MCM4P33991 863 aa18.44■□□□□ 0.54
ITGA3-216ENST00000570989 AAMPQ13685 434 aa18.44■□□□□ 0.54
ITGA3-216ENST00000570989 TULP4Q9NRJ4 1543 aa18.44■□□□□ 0.54
ITGA3-216ENST00000570989 PANK2Q9BZ23 570 aa18.44■□□□□ 0.54
ITGA3-216ENST00000570989 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
ITGA3-216ENST00000570989 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
ITGA3-216ENST00000570989 ESF1Q9H501 851 aaKnown RBP18.43■□□□□ 0.54
ITGA3-216ENST00000570989 ALKQ9UM73 1620 aa18.43■□□□□ 0.54
ITGA3-216ENST00000570989 GOLGA6L3A6NEY3 463 aa18.42■□□□□ 0.54
ITGA3-216ENST00000570989 ARXQ96QS3 562 aa18.42■□□□□ 0.54
ITGA3-216ENST00000570989 SPRYD3Q8NCJ5 442 aa18.4■□□□□ 0.54
ITGA3-216ENST00000570989 RRP7AQ9Y3A4 280 aaKnown RBP18.4■□□□□ 0.54
ITGA3-216ENST00000570989 YTHDC2Q9H6S0 1430 aaKnown RBP18.4■□□□□ 0.54
ITGA3-216ENST00000570989 RIMS2Q9UQ26 1411 aa18.4■□□□□ 0.54
ITGA3-216ENST00000570989 BCL2L13Q9BXK5 485 aa18.39■□□□□ 0.53
ITGA3-216ENST00000570989 GZF1Q9H116 711 aaPredicted RBP18.39■□□□□ 0.53
ITGA3-216ENST00000570989 EVC2Q86UK5 1308 aa18.39■□□□□ 0.53
ITGA3-216ENST00000570989 STK26Q9P289 416 aa18.39■□□□□ 0.53
ITGA3-216ENST00000570989 CLCN1P35523 988 aa18.38■□□□□ 0.53
ITGA3-216ENST00000570989 SETD1AO15047 1707 aaKnown RBP18.38■□□□□ 0.53
ITGA3-216ENST00000570989 NEUROD2Q15784 382 aa18.38■□□□□ 0.53
ITGA3-216ENST00000570989 RUNDC1Q96C34 613 aa18.37■□□□□ 0.53
ITGA3-216ENST00000570989 RWDD1Q9H446 243 aaPredicted RBP18.37■□□□□ 0.53
ITGA3-216ENST00000570989 SAFB2Q14151 953 aaKnown RBP eCLIP18.37■□□□□ 0.53
ITGA3-216ENST00000570989 TCP11L2Q8N4U5 519 aa18.37■□□□□ 0.53
ITGA3-216ENST00000570989 PUS7Q96PZ0 661 aaKnown RBP18.37■□□□□ 0.53
ITGA3-216ENST00000570989 SLC12A5Q9H2X9 1139 aa18.37■□□□□ 0.53
ITGA3-216ENST00000570989 NSD3Q9BZ95 1437 aa18.36■□□□□ 0.53
ITGA3-216ENST00000570989 CHMP5Q9NZZ3 219 aa18.36■□□□□ 0.53
ITGA3-216ENST00000570989 LMTK3Q96Q04 1460 aa18.36■□□□□ 0.53
ITGA3-216ENST00000570989 TRAK2O60296 914 aa18.35■□□□□ 0.53
ITGA3-216ENST00000570989 WDR63Q8IWG1 891 aa18.35■□□□□ 0.53
ITGA3-216ENST00000570989 ZNF692Q9BU19 519 aaPredicted RBP18.35■□□□□ 0.53
ITGA3-216ENST00000570989 TNRQ92752 1358 aa18.35■□□□□ 0.53
ITGA3-216ENST00000570989 C22orf23Q9BZE7 217 aa18.34■□□□□ 0.53
ITGA3-216ENST00000570989 USP32Q8NFA0 1604 aa18.34■□□□□ 0.53
ITGA3-216ENST00000570989 PNNQ9H307 717 aaKnown RBP18.34■□□□□ 0.53
ITGA3-216ENST00000570989 NRXN3Q9Y4C0 1643 aa18.34■□□□□ 0.53
ITGA3-216ENST00000570989 MVPQ14764 893 aaKnown RBP18.33■□□□□ 0.53
ITGA3-216ENST00000570989 PRAM1Q96QH2 718 aa18.33■□□□□ 0.52
ITGA3-216ENST00000570989 NCOA3Q9Y6Q9 1424 aa18.32■□□□□ 0.52
ITGA3-216ENST00000570989 UBR1Q8IWV7 1749 aa18.31■□□□□ 0.52
ITGA3-216ENST00000570989 MRE11P49959 708 aa18.31■□□□□ 0.52
ITGA3-216ENST00000570989 MFAP1P55081 439 aaKnown RBP18.31■□□□□ 0.52
ITGA3-216ENST00000570989 NAP1L5Q96NT1 182 aaPredicted RBP18.31■□□□□ 0.52
ITGA3-216ENST00000570989 CABP2Q9NPB3 220 aa18.31■□□□□ 0.52
ITGA3-216ENST00000570989 ANKRD36BQ8N2N9 1353 aa18.31■□□□□ 0.52
ITGA3-216ENST00000570989 HSPA2P54652 639 aa18.31■□□□□ 0.52
ITGA3-216ENST00000570989 CCDC27Q2M243 656 aa18.31■□□□□ 0.52
ITGA3-216ENST00000570989 DLC1Q96QB1 1528 aa18.3■□□□□ 0.52
ITGA3-216ENST00000570989 DDIT3P35638 169 aa18.3■□□□□ 0.52
ITGA3-216ENST00000570989 TNNT2P45379 298 aaPredicted RBP18.29■□□□□ 0.52
ITGA3-216ENST00000570989 MORC1Q86VD1 984 aa18.29■□□□□ 0.52
ITGA3-216ENST00000570989 MINK1Q8N4C8 1332 aaPredicted RBP18.29■□□□□ 0.52
ITGA3-216ENST00000570989 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.29■□□□□ 0.52
ITGA3-216ENST00000570989 ERBB4Q15303 1308 aa18.28■□□□□ 0.52
ITGA3-216ENST00000570989 SRPK2P78362 688 aaKnown RBP18.28■□□□□ 0.52
ITGA3-216ENST00000570989 GRPEL1Q9HAV7 217 aa18.28■□□□□ 0.52
ITGA3-216ENST00000570989 ADGRB2O60241 1585 aa18.27■□□□□ 0.52
ITGA3-216ENST00000570989 ZNF142P52746 1687 aaPredicted RBP18.27■□□□□ 0.52
ITGA3-216ENST00000570989 ZMYND15Q9H091 742 aa18.27■□□□□ 0.52
ITGA3-216ENST00000570989 ATAD2Q6PL18 1390 aa18.27■□□□□ 0.51
ITGA3-216ENST00000570989 ZKSCAN2Q63HK3 967 aa18.26■□□□□ 0.51
ITGA3-216ENST00000570989 DZIP1LQ8IYY4 767 aaKnown RBP18.26■□□□□ 0.51
ITGA3-216ENST00000570989 TMEM2Q9UHN6 1383 aa18.26■□□□□ 0.51
ITGA3-216ENST00000570989 DDX11L8A8MPP1 907 aa18.26■□□□□ 0.51
ITGA3-216ENST00000570989 HDAC1Q13547 482 aaPredicted RBP18.26■□□□□ 0.51
ITGA3-216ENST00000570989 CEP170BQ9Y4F5 1589 aaPredicted RBP18.25■□□□□ 0.51
ITGA3-216ENST00000570989 MYH16Q9H6N6 1097 aa18.25■□□□□ 0.51
ITGA3-216ENST00000570989 A0A1W2PP64 1363 aa18.25■□□□□ 0.51
ITGA3-216ENST00000570989 ABCC11Q96J66 1382 aa18.25■□□□□ 0.51
ITGA3-216ENST00000570989 MTHFSP49914 203 aa18.24■□□□□ 0.51
ITGA3-216ENST00000570989 STRCQ7RTU9 1775 aa18.24■□□□□ 0.51
ITGA3-216ENST00000570989 METP08581 1390 aa18.24■□□□□ 0.51
ITGA3-216ENST00000570989 HSCBQ8IWL3 235 aa18.24■□□□□ 0.51
ITGA3-216ENST00000570989 NCBP3Q53F19 620 aaKnown RBP18.23■□□□□ 0.51
ITGA3-216ENST00000570989 FTSJ3Q8IY81 847 aaKnown RBP18.23■□□□□ 0.51
ITGA3-216ENST00000570989 NSD2O96028 1365 aa18.23■□□□□ 0.51
ITGA3-216ENST00000570989 ESPNB1AK53 854 aa18.23■□□□□ 0.51
ITGA3-216ENST00000570989 HDGFP51858 240 aaKnown RBP18.23■□□□□ 0.51
ITGA3-216ENST00000570989 SMC5Q8IY18 1101 aa18.23■□□□□ 0.51
ITGA3-216ENST00000570989 ISY1Q9ULR0 285 aaKnown RBP18.23■□□□□ 0.51
ITGA3-216ENST00000570989 KNDC1Q76NI1 1749 aa18.22■□□□□ 0.51
ITGA3-216ENST00000570989 TRIM27P14373 513 aa18.22■□□□□ 0.51
ITGA3-216ENST00000570989 VSIG10Q8N0Z9 540 aa18.22■□□□□ 0.51
ITGA3-216ENST00000570989 RBM25P49756 843 aaKnown RBP18.22■□□□□ 0.51
ITGA3-216ENST00000570989 GAS2L3Q86XJ1 694 aa18.22■□□□□ 0.51
ITGA3-216ENST00000570989 CD163L1Q9NR16 1453 aa18.21■□□□□ 0.51
ITGA3-216ENST00000570989 TSR2Q969E8 191 aaKnown RBP18.21■□□□□ 0.51
ITGA3-216ENST00000570989 RRP9O43818 475 aaKnown RBP18.21■□□□□ 0.5
ITGA3-216ENST00000570989 HSP90AA1P07900 732 aaKnown RBP18.21■□□□□ 0.5
ITGA3-216ENST00000570989 WAPLQ7Z5K2 1190 aa18.21■□□□□ 0.5
ITGA3-216ENST00000570989 TNPO1Q92973 898 aaKnown RBP18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms