RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ANKARQ7Z5J8 1434 aa9.08□□□□□ -0.96
CTDNEP1-204ENST00000570484 RBM33Q96EV2 1170 aaKnown RBP9.08□□□□□ -0.96
CTDNEP1-204ENST00000570484 RGL2O15211 777 aa9.07□□□□□ -0.96
CTDNEP1-204ENST00000570484 ATF3P18847 181 aa9.07□□□□□ -0.96
CTDNEP1-204ENST00000570484 TMC1Q8TDI8 760 aa9.07□□□□□ -0.96
CTDNEP1-204ENST00000570484 CDK19Q9BWU1 502 aa9.07□□□□□ -0.96
CTDNEP1-204ENST00000570484 CABP2Q9NPB3 220 aa9.07□□□□□ -0.96
CTDNEP1-204ENST00000570484 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.07□□□□□ -0.96
CTDNEP1-204ENST00000570484 ATP7BP35670 1465 aa9.07□□□□□ -0.96
CTDNEP1-204ENST00000570484 CADPS2Q86UW7 1296 aa9.06□□□□□ -0.96
CTDNEP1-204ENST00000570484 PUS7Q96PZ0 661 aaKnown RBP9.06□□□□□ -0.96
CTDNEP1-204ENST00000570484 C19orf44Q9H6X5 657 aa9.06□□□□□ -0.96
CTDNEP1-204ENST00000570484 CCDC61Q9Y6R9 512 aa9.06□□□□□ -0.96
CTDNEP1-204ENST00000570484 STRCP1A6NGW2 1772 aa9.06□□□□□ -0.96
CTDNEP1-204ENST00000570484 PPIP5K1Q6PFW1 1433 aa9.05□□□□□ -0.96
CTDNEP1-204ENST00000570484 NUTM2FA1L443 756 aa9.05□□□□□ -0.96
CTDNEP1-204ENST00000570484 FMN2Q9NZ56 1722 aa9.05□□□□□ -0.96
CTDNEP1-204ENST00000570484 C11orf95C9JLR9 678 aaPredicted RBP9.04□□□□□ -0.96
CTDNEP1-204ENST00000570484 DDX10Q13206 875 aaKnown RBP9.04□□□□□ -0.96
CTDNEP1-204ENST00000570484 HDGFL2Q7Z4V5 671 aaPredicted RBP9.04□□□□□ -0.96
CTDNEP1-204ENST00000570484 RNF25Q96BH1 459 aaPredicted RBP9.04□□□□□ -0.96
CTDNEP1-204ENST00000570484 NUDT16Q96DE0 195 aaKnown RBP9.04□□□□□ -0.96
CTDNEP1-204ENST00000570484 TERF2IPQ9NYB0 399 aa9.04□□□□□ -0.96
CTDNEP1-204ENST00000570484 ITSN1Q15811 1721 aa9.04□□□□□ -0.96
CTDNEP1-204ENST00000570484 LTBP4Q8N2S1 1624 aa9.04□□□□□ -0.96
CTDNEP1-204ENST00000570484 MYOM1P52179 1685 aa9.04□□□□□ -0.96
CTDNEP1-204ENST00000570484 ANKRD36BQ8N2N9 1353 aa9.03□□□□□ -0.96
CTDNEP1-204ENST00000570484 C19orf67A6NJJ6 358 aa9.03□□□□□ -0.96
CTDNEP1-204ENST00000570484 TOPAZ1Q8N9V7 1692 aa9.03□□□□□ -0.96
CTDNEP1-204ENST00000570484 MST1RQ04912 1400 aa9.02□□□□□ -0.97
CTDNEP1-204ENST00000570484 PRR36Q9H6K5 1346 aa9.02□□□□□ -0.97
CTDNEP1-204ENST00000570484 C1orf167Q5SNV9 1468 aa9.02□□□□□ -0.97
CTDNEP1-204ENST00000570484 A0A1W2PP64 1363 aa9.01□□□□□ -0.97
CTDNEP1-204ENST00000570484 KIF1AQ12756 1690 aa9.01□□□□□ -0.97
CTDNEP1-204ENST00000570484 HAX1O00165 279 aa9.01□□□□□ -0.97
CTDNEP1-204ENST00000570484 ESCO1Q5FWF5 840 aa9.01□□□□□ -0.97
CTDNEP1-204ENST00000570484 DIEXFQ68CQ4 756 aaKnown RBP9.01□□□□□ -0.97
CTDNEP1-204ENST00000570484 NGDNQ8NEJ9 315 aaKnown RBP9.01□□□□□ -0.97
CTDNEP1-204ENST00000570484 NSD3Q9BZ95 1437 aa9.01□□□□□ -0.97
CTDNEP1-204ENST00000570484 TSPYL2Q9H2G4 693 aaPredicted RBP9.01□□□□□ -0.97
CTDNEP1-204ENST00000570484 CABP1Q9NZU7 370 aa9.01□□□□□ -0.97
CTDNEP1-204ENST00000570484 KNSTRNQ9Y448 316 aa9.01□□□□□ -0.97
CTDNEP1-204ENST00000570484 USP32Q8NFA0 1604 aa9.01□□□□□ -0.97
CTDNEP1-204ENST00000570484 IQSEC2Q5JU85 1478 aa9.01□□□□□ -0.97
CTDNEP1-204ENST00000570484 KTN1Q86UP2 1357 aaKnown RBP9□□□□□ -0.97
CTDNEP1-204ENST00000570484 SP7Q8TDD2 431 aaPredicted RBP9□□□□□ -0.97
CTDNEP1-204ENST00000570484 SLC12A5Q9H2X9 1139 aa9□□□□□ -0.97
CTDNEP1-204ENST00000570484 PANK3Q9H999 370 aa9□□□□□ -0.97
CTDNEP1-204ENST00000570484 PHF8Q9UPP1 1060 aa9□□□□□ -0.97
CTDNEP1-204ENST00000570484 EDC4Q6P2E9 1401 aaKnown RBP8.99□□□□□ -0.97
CTDNEP1-204ENST00000570484 PMFBP1Q8TBY8 1022 aa8.99□□□□□ -0.97
CTDNEP1-204ENST00000570484 SGIP1Q9BQI5 828 aa8.99□□□□□ -0.97
CTDNEP1-204ENST00000570484 ACEP12821 1306 aa8.99□□□□□ -0.97
CTDNEP1-204ENST00000570484 CGNL1Q0VF96 1302 aa8.99□□□□□ -0.97
CTDNEP1-204ENST00000570484 POLR3AO14802 1390 aaPredicted RBP8.99□□□□□ -0.97
CTDNEP1-204ENST00000570484 ANP32CO43423 234 aa8.98□□□□□ -0.97
CTDNEP1-204ENST00000570484 NPHP3Q7Z494 1330 aa8.98□□□□□ -0.97
CTDNEP1-204ENST00000570484 NSD2O96028 1365 aa8.98□□□□□ -0.97
CTDNEP1-204ENST00000570484 USP6P35125 1406 aa8.97□□□□□ -0.97
CTDNEP1-204ENST00000570484 CD163L1Q9NR16 1453 aa8.97□□□□□ -0.97
CTDNEP1-204ENST00000570484 XIRP1Q702N8 1843 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-204ENST00000570484 PLEKHG3A1L390 1219 aa8.97□□□□□ -0.97
CTDNEP1-204ENST00000570484 RIOK3O14730 519 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-204ENST00000570484 TOM1O60784 492 aa8.97□□□□□ -0.97
CTDNEP1-204ENST00000570484 PYGBP11216 843 aa8.97□□□□□ -0.97
CTDNEP1-204ENST00000570484 SLAIN2Q9P270 581 aa8.97□□□□□ -0.97
CTDNEP1-204ENST00000570484 CPSF1Q10570 1443 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-204ENST00000570484 UBAP1LF5GYI3 381 aa8.96□□□□□ -0.98
CTDNEP1-204ENST00000570484 PAK3O75914 559 aaPredicted RBP8.96□□□□□ -0.98
CTDNEP1-204ENST00000570484 CD44P16070 742 aaKnown RBP8.96□□□□□ -0.98
CTDNEP1-204ENST00000570484 CNGB1Q14028 1251 aaPredicted RBP8.96□□□□□ -0.98
CTDNEP1-204ENST00000570484 ORAI2Q96SN7 254 aa8.96□□□□□ -0.98
CTDNEP1-204ENST00000570484 BRD4O60885 1362 aaPredicted RBP8.96□□□□□ -0.98
CTDNEP1-204ENST00000570484 NRKQ7Z2Y5 1582 aa8.95□□□□□ -0.98
CTDNEP1-204ENST00000570484 MON2Q7Z3U7 1717 aa8.95□□□□□ -0.98
CTDNEP1-204ENST00000570484 PSME1Q06323 249 aa8.95□□□□□ -0.98
CTDNEP1-204ENST00000570484 BRINP3Q76B58 766 aa8.95□□□□□ -0.98
CTDNEP1-204ENST00000570484 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.95□□□□□ -0.98
CTDNEP1-204ENST00000570484 CERKQ8TCT0 537 aa8.95□□□□□ -0.98
CTDNEP1-204ENST00000570484 KIF12Q96FN5 646 aa8.95□□□□□ -0.98
CTDNEP1-204ENST00000570484 TTC21AQ8NDW8 1320 aa8.95□□□□□ -0.98
CTDNEP1-204ENST00000570484 FOXO3O43524 673 aa8.94□□□□□ -0.98
CTDNEP1-204ENST00000570484 CC2D1BQ5T0F9 858 aaKnown RBP8.94□□□□□ -0.98
CTDNEP1-204ENST00000570484 NPC1L1Q9UHC9 1359 aa8.94□□□□□ -0.98
CTDNEP1-204ENST00000570484 AKAP12Q02952 1782 aa8.94□□□□□ -0.98
CTDNEP1-204ENST00000570484 PIP4K2BP78356 416 aa8.93□□□□□ -0.98
CTDNEP1-204ENST00000570484 XPCQ01831 940 aaPredicted RBP8.93□□□□□ -0.98
CTDNEP1-204ENST00000570484 LMOD2Q6P5Q4 547 aa8.93□□□□□ -0.98
CTDNEP1-204ENST00000570484 ZNF579Q8NAF0 562 aaKnown RBP8.93□□□□□ -0.98
CTDNEP1-204ENST00000570484 ZRANB1Q9UGI0 708 aa8.93□□□□□ -0.98
CTDNEP1-204ENST00000570484 TTC21BQ7Z4L5 1316 aa8.93□□□□□ -0.98
CTDNEP1-204ENST00000570484 TNS3Q68CZ2 1445 aa8.93□□□□□ -0.98
CTDNEP1-204ENST00000570484 ROBO1Q9Y6N7 1651 aa8.93□□□□□ -0.98
CTDNEP1-204ENST00000570484 ARHGEF10O15013 1369 aa8.92□□□□□ -0.98
CTDNEP1-204ENST00000570484 MORC1Q86VD1 984 aa8.92□□□□□ -0.98
CTDNEP1-204ENST00000570484 COG3Q96JB2 828 aa8.92□□□□□ -0.98
CTDNEP1-204ENST00000570484 CARD14Q9BXL6 1004 aa8.92□□□□□ -0.98
CTDNEP1-204ENST00000570484 TAOK2Q9UL54 1235 aa8.92□□□□□ -0.98
CTDNEP1-204ENST00000570484 AHDC1Q5TGY3 1603 aaPredicted RBP8.91□□□□□ -0.98
CTDNEP1-204ENST00000570484 PXDNQ92626 1479 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms