RNA–Protein interactions for RNA: ENST00000570308.5

MMP2-208, Transcript of matrix metallopeptidase 2, humanhuman

TSL 1 (best) BASIC

Gene MMP2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-208ENST00000570308 NASPP49321 788 aaPredicted RBP13.12□□□□□ -0.31
MMP2-208ENST00000570308 CYB5RLQ6IPT4 315 aa13.12□□□□□ -0.31
MMP2-208ENST00000570308 PAXIP1Q6ZW49 1069 aaPredicted RBP13.12□□□□□ -0.31
MMP2-208ENST00000570308 ARHGEF28Q8N1W1 1705 aaKnown RBP13.11□□□□□ -0.31
MMP2-208ENST00000570308 RAPGEF3O95398 923 aa13.11□□□□□ -0.31
MMP2-208ENST00000570308 CSPP1Q1MSJ5 1256 aa13.11□□□□□ -0.31
MMP2-208ENST00000570308 GAS2L3Q86XJ1 694 aa13.11□□□□□ -0.31
MMP2-208ENST00000570308 TMEM51Q9NW97 253 aa13.11□□□□□ -0.31
MMP2-208ENST00000570308 ERVK-7P63135 1459 aa13.11□□□□□ -0.31
MMP2-208ENST00000570308 SKOR2Q2VWA4 1001 aaPredicted RBP13.11□□□□□ -0.31
MMP2-208ENST00000570308 TBC1D32Q96NH3 1257 aa13.11□□□□□ -0.31
MMP2-208ENST00000570308 QRICH2Q9H0J4 1663 aa13.11□□□□□ -0.31
MMP2-208ENST00000570308 TAF3Q5VWG9 929 aa13.1□□□□□ -0.31
MMP2-208ENST00000570308 PUS7Q96PZ0 661 aaKnown RBP13.1□□□□□ -0.31
MMP2-208ENST00000570308 SLC52A1Q9NWF4 448 aa13.1□□□□□ -0.31
MMP2-208ENST00000570308 TSPOAP1O95153 1857 aa13.1□□□□□ -0.31
MMP2-208ENST00000570308 PTMSP20962 102 aa13.09□□□□□ -0.31
MMP2-208ENST00000570308 CDK11BP21127 795 aaKnown RBP13.09□□□□□ -0.31
MMP2-208ENST00000570308 HS1BP3Q53T59 392 aa13.09□□□□□ -0.31
MMP2-208ENST00000570308 C14orf93Q9H972 538 aaKnown RBP13.08□□□□□ -0.32
MMP2-208ENST00000570308 CLTCQ00610 1675 aaKnown RBP13.08□□□□□ -0.32
MMP2-208ENST00000570308 NLRP1Q9C000 1473 aa13.08□□□□□ -0.32
MMP2-208ENST00000570308 MYO5BQ9ULV0 1848 aa13.08□□□□□ -0.32
MMP2-208ENST00000570308 ZNF500O60304 480 aaPredicted RBP13.08□□□□□ -0.32
MMP2-208ENST00000570308 FAM69CQ0P6D2 419 aa13.08□□□□□ -0.32
MMP2-208ENST00000570308 ADGRF5Q8IZF2 1346 aa13.08□□□□□ -0.32
MMP2-208ENST00000570308 SASS6Q6UVJ0 657 aa13.07□□□□□ -0.32
MMP2-208ENST00000570308 GBP4Q96PP9 640 aa13.07□□□□□ -0.32
MMP2-208ENST00000570308 ASXL1Q8IXJ9 1541 aa13.07□□□□□ -0.32
MMP2-208ENST00000570308 SETD1AO15047 1707 aaKnown RBP13.06□□□□□ -0.32
MMP2-208ENST00000570308 XPCQ01831 940 aaPredicted RBP13.06□□□□□ -0.32
MMP2-208ENST00000570308 VGLL3A8MV65 326 aa13.06□□□□□ -0.32
MMP2-208ENST00000570308 NOL7Q9UMY1 257 aaKnown RBP13.05□□□□□ -0.32
MMP2-208ENST00000570308 PLCD3Q8N3E9 789 aa13.05□□□□□ -0.32
MMP2-208ENST00000570308 ZNF830Q96NB3 372 aaPredicted RBP13.04□□□□□ -0.32
MMP2-208ENST00000570308 BLMP54132 1417 aaPredicted RBP13.04□□□□□ -0.32
MMP2-208ENST00000570308 DLC1Q96QB1 1528 aa13.04□□□□□ -0.32
MMP2-208ENST00000570308 HSCBQ8IWL3 235 aa13.04□□□□□ -0.32
MMP2-208ENST00000570308 CBX1P83916 185 aa13.03□□□□□ -0.32
MMP2-208ENST00000570308 GGT6Q6P531 493 aa13.03□□□□□ -0.32
MMP2-208ENST00000570308 FTSJ3Q8IY81 847 aaKnown RBP13.03□□□□□ -0.32
MMP2-208ENST00000570308 IGHDP01880 384 aa13.02□□□□□ -0.32
MMP2-208ENST00000570308 DNTTIP2Q5QJE6 756 aaKnown RBP13.02□□□□□ -0.32
MMP2-208ENST00000570308 KNDC1Q76NI1 1749 aa13.01□□□□□ -0.33
MMP2-208ENST00000570308 VGFO15240 615 aaPredicted RBP13.01□□□□□ -0.33
MMP2-208ENST00000570308 MCM5P33992 734 aa13.01□□□□□ -0.33
MMP2-208ENST00000570308 CFAP70Q5T0N1 1121 aa13.01□□□□□ -0.33
MMP2-208ENST00000570308 CFAP65Q6ZU64 1925 aaKnown RBP13□□□□□ -0.33
MMP2-208ENST00000570308 TNPO1Q92973 898 aaKnown RBP13□□□□□ -0.33
MMP2-208ENST00000570308 DUSP27Q5VZP5 1158 aa13□□□□□ -0.33
MMP2-208ENST00000570308 ZKSCAN5Q9Y2L8 839 aa13□□□□□ -0.33
MMP2-208ENST00000570308 GOLGA6L22H0YM25 854 aa12.99□□□□□ -0.33
MMP2-208ENST00000570308 A2ML1A8K2U0 1454 aa12.99□□□□□ -0.33
MMP2-208ENST00000570308 NINLQ9Y2I6 1382 aa12.99□□□□□ -0.33
MMP2-208ENST00000570308 C22orf23Q9BZE7 217 aa12.99□□□□□ -0.33
MMP2-208ENST00000570308 PANK3Q9H999 370 aa12.99□□□□□ -0.33
MMP2-208ENST00000570308 TULP4Q9NRJ4 1543 aa12.99□□□□□ -0.33
MMP2-208ENST00000570308 ALKQ9UM73 1620 aa12.98□□□□□ -0.33
MMP2-208ENST00000570308 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
MMP2-208ENST00000570308 CGNQ9P2M7 1197 aaKnown RBP12.98□□□□□ -0.33
MMP2-208ENST00000570308 PTPRMP28827 1452 aa12.98□□□□□ -0.33
MMP2-208ENST00000570308 CIZ1Q9ULV3 898 aaPredicted RBP12.98□□□□□ -0.33
MMP2-208ENST00000570308 NRXN3Q9Y4C0 1643 aa12.98□□□□□ -0.33
MMP2-208ENST00000570308 ZNF692Q9BU19 519 aaPredicted RBP12.97□□□□□ -0.33
MMP2-208ENST00000570308 CGNL1Q0VF96 1302 aa12.97□□□□□ -0.33
MMP2-208ENST00000570308 GOLGA2Q08379 1002 aa12.97□□□□□ -0.33
MMP2-208ENST00000570308 IDI1Q13907 227 aa12.97□□□□□ -0.33
MMP2-208ENST00000570308 ZMYM3Q14202 1370 aa12.96□□□□□ -0.33
MMP2-208ENST00000570308 IBTKQ9P2D0 1353 aaPredicted RBP12.96□□□□□ -0.33
MMP2-208ENST00000570308 MYRIPQ8NFW9 859 aa12.96□□□□□ -0.33
MMP2-208ENST00000570308 ANKRD26Q9UPS8 1709 aa12.96□□□□□ -0.34
MMP2-208ENST00000570308 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.96□□□□□ -0.34
MMP2-208ENST00000570308 CLUAP1Q96AJ1 413 aa12.95□□□□□ -0.34
MMP2-208ENST00000570308 DDX49Q9Y6V7 483 aaKnown RBP12.95□□□□□ -0.34
MMP2-208ENST00000570308 CCDC39Q9UFE4 941 aa12.94□□□□□ -0.34
MMP2-208ENST00000570308 UBR1Q8IWV7 1749 aa12.94□□□□□ -0.34
MMP2-208ENST00000570308 ZNF771Q7L3S4 317 aaPredicted RBP12.94□□□□□ -0.34
MMP2-208ENST00000570308 MFAP1P55081 439 aaKnown RBP12.94□□□□□ -0.34
MMP2-208ENST00000570308 HMGN5P82970 282 aaKnown RBP12.94□□□□□ -0.34
MMP2-208ENST00000570308 RAB3GAP1Q15042 981 aa12.94□□□□□ -0.34
MMP2-208ENST00000570308 PDLIM2Q96JY6 352 aa12.93□□□□□ -0.34
MMP2-208ENST00000570308 NSD2O96028 1365 aa12.93□□□□□ -0.34
MMP2-208ENST00000570308 MED14O60244 1454 aa12.93□□□□□ -0.34
MMP2-208ENST00000570308 HSP90AB1P08238 724 aaKnown RBP12.93□□□□□ -0.34
MMP2-208ENST00000570308 KLHL40Q2TBA0 621 aa12.93□□□□□ -0.34
MMP2-208ENST00000570308 PMFBP1Q8TBY8 1022 aa12.93□□□□□ -0.34
MMP2-208ENST00000570308 DDIT3P35638 169 aa12.92□□□□□ -0.34
MMP2-208ENST00000570308 ATP2B3Q16720 1220 aa12.92□□□□□ -0.34
MMP2-208ENST00000570308 PRIMPOLQ96LW4 560 aa12.92□□□□□ -0.34
MMP2-208ENST00000570308 ZBTB22O15209 634 aa12.91□□□□□ -0.34
MMP2-208ENST00000570308 RBM25P49756 843 aaKnown RBP12.91□□□□□ -0.34
MMP2-208ENST00000570308 SMC5Q8IY18 1101 aa12.91□□□□□ -0.34
MMP2-208ENST00000570308 TECPR2O15040 1411 aa12.91□□□□□ -0.34
MMP2-208ENST00000570308 YTHDC2Q9H6S0 1430 aaKnown RBP12.91□□□□□ -0.34
MMP2-208ENST00000570308 ZNF445P59923 1031 aa12.91□□□□□ -0.34
MMP2-208ENST00000570308 PDE3AQ14432 1141 aa12.91□□□□□ -0.34
MMP2-208ENST00000570308 ZFP91Q96JP5 570 aaPredicted RBP12.91□□□□□ -0.34
MMP2-208ENST00000570308 KNSTRNQ9Y448 316 aa12.91□□□□□ -0.34
MMP2-208ENST00000570308 CPS1P31327 1500 aa12.91□□□□□ -0.34
MMP2-208ENST00000570308 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms