RNA–Protein interactions for RNA: ENST00000570177.6

TCF4-245, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,872 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-245ENST00000570177 EDC4Q6P2E9 1401 aaKnown RBP13.13□□□□□ -0.31
TCF4-245ENST00000570177 NUTM2FA1L443 756 aa13.12□□□□□ -0.31
TCF4-245ENST00000570177 NEFLP07196 543 aa13.12□□□□□ -0.31
TCF4-245ENST00000570177 ZRANB1Q9UGI0 708 aa13.12□□□□□ -0.31
TCF4-245ENST00000570177 AKAP12Q02952 1782 aa13.11□□□□□ -0.31
TCF4-245ENST00000570177 MON2Q7Z3U7 1717 aa13.11□□□□□ -0.31
TCF4-245ENST00000570177 ANKRD26Q9UPS8 1709 aa13.11□□□□□ -0.31
TCF4-245ENST00000570177 SSH2Q76I76 1423 aa13.11□□□□□ -0.31
TCF4-245ENST00000570177 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.11□□□□□ -0.31
TCF4-245ENST00000570177 SALL2Q9Y467 1007 aaPredicted RBP13.11□□□□□ -0.31
TCF4-245ENST00000570177 ACEP12821 1306 aa13.11□□□□□ -0.31
TCF4-245ENST00000570177 SHPRHQ149N8 1683 aa13.11□□□□□ -0.31
TCF4-245ENST00000570177 TULP1O00294 542 aaPredicted RBP13.1□□□□□ -0.31
TCF4-245ENST00000570177 NME9Q86XW9 330 aa13.1□□□□□ -0.31
TCF4-245ENST00000570177 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
TCF4-245ENST00000570177 RBM33Q96EV2 1170 aaKnown RBP13.1□□□□□ -0.31
TCF4-245ENST00000570177 SMG6Q86US8 1419 aaKnown RBP13.09□□□□□ -0.31
TCF4-245ENST00000570177 NWD1Q149M9 1564 aa13.09□□□□□ -0.31
TCF4-245ENST00000570177 COL3A1P02461 1466 aaPredicted RBP13.09□□□□□ -0.31
TCF4-245ENST00000570177 FBLN1P23142 703 aa13.09□□□□□ -0.31
TCF4-245ENST00000570177 KIF20BQ96Q89 1820 aa13.09□□□□□ -0.31
TCF4-245ENST00000570177 PNPLA6Q8IY17 1366 aa13.08□□□□□ -0.31
TCF4-245ENST00000570177 WDR43Q15061 677 aaKnown RBP eCLIP13.08□□□□□ -0.32
TCF4-245ENST00000570177 ANKARQ7Z5J8 1434 aa13.08□□□□□ -0.32
TCF4-245ENST00000570177 NRKQ7Z2Y5 1582 aa13.08□□□□□ -0.32
TCF4-245ENST00000570177 USP6P35125 1406 aa13.08□□□□□ -0.32
TCF4-245ENST00000570177 TTC21BQ7Z4L5 1316 aa13.07□□□□□ -0.32
TCF4-245ENST00000570177 ZNF521Q96K83 1311 aa13.07□□□□□ -0.32
TCF4-245ENST00000570177 NALCNQ8IZF0 1738 aa13.07□□□□□ -0.32
TCF4-245ENST00000570177 HSPA2P54652 639 aa13.07□□□□□ -0.32
TCF4-245ENST00000570177 FMN2Q9NZ56 1722 aa13.07□□□□□ -0.32
TCF4-245ENST00000570177 RGPD8O14715 1765 aaPredicted RBP13.07□□□□□ -0.32
TCF4-245ENST00000570177 POLKQ9UBT6 870 aa13.06□□□□□ -0.32
TCF4-245ENST00000570177 ADGRL3Q9HAR2 1447 aa13.06□□□□□ -0.32
TCF4-245ENST00000570177 PMFBP1Q8TBY8 1022 aa13.06□□□□□ -0.32
TCF4-245ENST00000570177 SUPT16HQ9Y5B9 1047 aaKnown RBP13.06□□□□□ -0.32
TCF4-245ENST00000570177 LMTK3Q96Q04 1460 aa13.06□□□□□ -0.32
TCF4-245ENST00000570177 ITSN1Q15811 1721 aa13.05□□□□□ -0.32
TCF4-245ENST00000570177 HOMEZQ8IX15 550 aa13.05□□□□□ -0.32
TCF4-245ENST00000570177 CCDC146Q8IYE0 955 aa13.05□□□□□ -0.32
TCF4-245ENST00000570177 NUDCQ9Y266 331 aa13.05□□□□□ -0.32
TCF4-245ENST00000570177 CDCA7LQ96GN5 454 aa13.04□□□□□ -0.32
TCF4-245ENST00000570177 AATKQ6ZMQ8 1374 aa13.04□□□□□ -0.32
TCF4-245ENST00000570177 OVOS2A0A0J9YW53 1432 aa13.03□□□□□ -0.32
TCF4-245ENST00000570177 OVOS2Q6IE36 1432 aa13.03□□□□□ -0.32
TCF4-245ENST00000570177 APAF1O14727 1248 aa13.03□□□□□ -0.32
TCF4-245ENST00000570177 PDE3BQ13370 1112 aa13.02□□□□□ -0.32
TCF4-245ENST00000570177 CFAP53Q96M91 514 aa13.02□□□□□ -0.32
TCF4-245ENST00000570177 STRCP1A6NGW2 1772 aa13.02□□□□□ -0.33
TCF4-245ENST00000570177 RNF123Q5XPI4 1314 aa13.01□□□□□ -0.33
TCF4-245ENST00000570177 USP31Q70CQ4 1352 aa13.01□□□□□ -0.33
TCF4-245ENST00000570177 COG3Q96JB2 828 aa13.01□□□□□ -0.33
TCF4-245ENST00000570177 EMILIN1Q9Y6C2 1016 aa13.01□□□□□ -0.33
TCF4-245ENST00000570177 STRCQ7RTU9 1775 aa13□□□□□ -0.33
TCF4-245ENST00000570177 IQSEC2Q5JU85 1478 aa13□□□□□ -0.33
TCF4-245ENST00000570177 PLEKHF1Q96S99 279 aa13□□□□□ -0.33
TCF4-245ENST00000570177 TTC21AQ8NDW8 1320 aa13□□□□□ -0.33
TCF4-245ENST00000570177 PROSER2Q86WR7 435 aaPredicted RBP12.99□□□□□ -0.33
TCF4-245ENST00000570177 NGDNQ8NEJ9 315 aaKnown RBP12.99□□□□□ -0.33
TCF4-245ENST00000570177 MAP2P11137 1827 aaKnown RBP12.99□□□□□ -0.33
TCF4-245ENST00000570177 FKBP8Q14318 412 aa12.99□□□□□ -0.33
TCF4-245ENST00000570177 TPRNQ4KMQ1 711 aa12.99□□□□□ -0.33
TCF4-245ENST00000570177 TRMT2AQ8IZ69 625 aaKnown RBP12.99□□□□□ -0.33
TCF4-245ENST00000570177 RUNDC1Q96C34 613 aa12.99□□□□□ -0.33
TCF4-245ENST00000570177 PHF8Q9UPP1 1060 aa12.99□□□□□ -0.33
TCF4-245ENST00000570177 DMRT2Q9Y5R5 561 aa12.99□□□□□ -0.33
TCF4-245ENST00000570177 RRS1Q15050 365 aaKnown RBP12.98□□□□□ -0.33
TCF4-245ENST00000570177 SPINK5Q9NQ38 1064 aaPredicted RBP12.98□□□□□ -0.33
TCF4-245ENST00000570177 U2AF1L5P0DN76 240 aaPredicted RBP12.97□□□□□ -0.33
TCF4-245ENST00000570177 IL13P35225 146 aa12.97□□□□□ -0.33
TCF4-245ENST00000570177 U2AF1Q01081 240 aaKnown RBP eCLIP12.97□□□□□ -0.33
TCF4-245ENST00000570177 CDK12Q9NYV4 1490 aaPredicted RBP12.97□□□□□ -0.33
TCF4-245ENST00000570177 DIAPH1O60610 1272 aaKnown RBP12.97□□□□□ -0.33
TCF4-245ENST00000570177 DUSP27Q5VZP5 1158 aa12.97□□□□□ -0.33
TCF4-245ENST00000570177 TCP11L2Q8N4U5 519 aa12.97□□□□□ -0.33
TCF4-245ENST00000570177 PIK3C2AO00443 1686 aa12.97□□□□□ -0.33
TCF4-245ENST00000570177 SLFN5Q08AF3 891 aa12.96□□□□□ -0.33
TCF4-245ENST00000570177 NGEFQ8N5V2 710 aa12.96□□□□□ -0.33
TCF4-245ENST00000570177 ORAI2Q96SN7 254 aa12.96□□□□□ -0.33
TCF4-245ENST00000570177 TMEM94Q12767 1356 aa12.96□□□□□ -0.34
TCF4-245ENST00000570177 MARF1Q9Y4F3 1742 aaKnown RBP12.96□□□□□ -0.34
TCF4-245ENST00000570177 C19orf44Q9H6X5 657 aa12.95□□□□□ -0.34
TCF4-245ENST00000570177 NCOA3Q9Y6Q9 1424 aa12.95□□□□□ -0.34
TCF4-245ENST00000570177 WWC1Q8IX03 1113 aa12.95□□□□□ -0.34
TCF4-245ENST00000570177 C1orf167Q5SNV9 1468 aa12.94□□□□□ -0.34
TCF4-245ENST00000570177 PEAK1Q9H792 1746 aa12.94□□□□□ -0.34
TCF4-245ENST00000570177 PPM1GO15355 546 aaPredicted RBP12.94□□□□□ -0.34
TCF4-245ENST00000570177 ESCO1Q5FWF5 840 aa12.94□□□□□ -0.34
TCF4-245ENST00000570177 USP54Q70EL1 1684 aa12.94□□□□□ -0.34
TCF4-245ENST00000570177 U2SURPO15042 1029 aaKnown RBP12.93□□□□□ -0.34
TCF4-245ENST00000570177 PDIA4P13667 645 aaKnown RBP12.93□□□□□ -0.34
TCF4-245ENST00000570177 IRX6P78412 446 aaPredicted RBP12.93□□□□□ -0.34
TCF4-245ENST00000570177 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
TCF4-245ENST00000570177 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
TCF4-245ENST00000570177 RRP7AQ9Y3A4 280 aaKnown RBP12.93□□□□□ -0.34
TCF4-245ENST00000570177 CCDC27Q2M243 656 aa12.93□□□□□ -0.34
TCF4-245ENST00000570177 MAP3K19Q56UN5 1328 aa12.92□□□□□ -0.34
TCF4-245ENST00000570177 FCHSD2O94868 740 aa12.92□□□□□ -0.34
TCF4-245ENST00000570177 DEKP35659 375 aaKnown RBP12.92□□□□□ -0.34
TCF4-245ENST00000570177 PLCB2Q00722 1185 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms