RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 C6orf229H3BNL8 230 aa7.13□□□□□ -1.27
UBR1-211ENST00000569971 DIXDC1Q155Q3 683 aa7.13□□□□□ -1.27
UBR1-211ENST00000569971 ZMYND15Q9H091 742 aa7.13□□□□□ -1.27
UBR1-211ENST00000569971 NXF1Q9UBU9 619 aaKnown RBP7.13□□□□□ -1.27
UBR1-211ENST00000569971 PCDHGC3Q9UN70 934 aa7.13□□□□□ -1.27
UBR1-211ENST00000569971 CAPN5O15484 640 aaPredicted RBP7.12□□□□□ -1.27
UBR1-211ENST00000569971 VARSP26640 1264 aaKnown RBP7.12□□□□□ -1.27
UBR1-211ENST00000569971 SH3BP2P78314 561 aa7.12□□□□□ -1.27
UBR1-211ENST00000569971 PTCRAQ6ISU1 281 aaPredicted RBP7.12□□□□□ -1.27
UBR1-211ENST00000569971 HOMEZQ8IX15 550 aa7.12□□□□□ -1.27
UBR1-211ENST00000569971 SYMPKQ92797 1274 aaKnown RBP7.12□□□□□ -1.27
UBR1-211ENST00000569971 UNC93B1Q9H1C4 597 aa7.12□□□□□ -1.27
UBR1-211ENST00000569971 SSTR3P32745 418 aaPredicted RBP7.11□□□□□ -1.27
UBR1-211ENST00000569971 MTMR2Q13614 643 aa7.11□□□□□ -1.27
UBR1-211ENST00000569971 LCE2CQ5TA81 110 aa7.11□□□□□ -1.27
UBR1-211ENST00000569971 SPIRE2Q8WWL2 714 aa7.11□□□□□ -1.27
UBR1-211ENST00000569971 KCNH2Q12809 1159 aa7.1□□□□□ -1.27
UBR1-211ENST00000569971 GIGYF2Q6Y7W6 1299 aaKnown RBP7.1□□□□□ -1.27
UBR1-211ENST00000569971 IRF7Q92985 503 aa7.1□□□□□ -1.27
UBR1-211ENST00000569971 TRIM46Q7Z4K8 759 aa7.09□□□□□ -1.27
UBR1-211ENST00000569971 ZNF511Q8NB15 262 aa7.09□□□□□ -1.27
UBR1-211ENST00000569971 PRR7Q8TB68 274 aa7.08□□□□□ -1.28
UBR1-211ENST00000569971 MOXD2PA6NHM9 499 aa7.07□□□□□ -1.28
UBR1-211ENST00000569971 H3BM21 787 aa7.07□□□□□ -1.28
UBR1-211ENST00000569971 RSPH6AQ9H0K4 717 aa7.07□□□□□ -1.28
UBR1-211ENST00000569971 ADH1CP00326 375 aa7.06□□□□□ -1.28
UBR1-211ENST00000569971 BMP1P13497 986 aa7.06□□□□□ -1.28
UBR1-211ENST00000569971 GOPCQ9HD26 462 aa7.06□□□□□ -1.28
UBR1-211ENST00000569971 NNTQ13423 1086 aa7.05□□□□□ -1.28
UBR1-211ENST00000569971 PRPF38BQ5VTL8 546 aaKnown RBP7.05□□□□□ -1.28
UBR1-211ENST00000569971 LYPD8Q6UX82 237 aa7.05□□□□□ -1.28
UBR1-211ENST00000569971 FAM174AQ8TBP5 190 aa7.05□□□□□ -1.28
UBR1-211ENST00000569971 BAP1Q92560 729 aa7.05□□□□□ -1.28
UBR1-211ENST00000569971 CDK15Q96Q40 435 aa7.05□□□□□ -1.28
UBR1-211ENST00000569971 NDUFV2P19404 249 aa7.04□□□□□ -1.28
UBR1-211ENST00000569971 SCARF1Q14162 830 aa7.04□□□□□ -1.28
UBR1-211ENST00000569971 MRPL14Q6P1L8 145 aaKnown RBP7.04□□□□□ -1.28
UBR1-211ENST00000569971 RSBN1LQ6PCB5 846 aaPredicted RBP7.04□□□□□ -1.28
UBR1-211ENST00000569971 PCMTD1Q96MG8 357 aaPredicted RBP7.04□□□□□ -1.28
UBR1-211ENST00000569971 TLL2Q9Y6L7 1015 aa7.04□□□□□ -1.28
UBR1-211ENST00000569971 VSIG8P0DPA2 414 aa7.03□□□□□ -1.28
UBR1-211ENST00000569971 ZSCAN1Q8NBB4 408 aa7.03□□□□□ -1.28
UBR1-211ENST00000569971 ZFP42Q96MM3 310 aa7.03□□□□□ -1.28
UBR1-211ENST00000569971 BEGAINQ9BUH8 593 aa7.03□□□□□ -1.28
UBR1-211ENST00000569971 SPTLC1O15269 473 aa7.02□□□□□ -1.29
UBR1-211ENST00000569971 F12P00748 615 aaPredicted RBP7.02□□□□□ -1.29
UBR1-211ENST00000569971 TIMP2P16035 220 aa7.02□□□□□ -1.29
UBR1-211ENST00000569971 GMPRP36959 345 aa7.02□□□□□ -1.29
UBR1-211ENST00000569971 FLIIQ13045 1269 aa7.02□□□□□ -1.29
UBR1-211ENST00000569971 LINC01559Q495D7 138 aa7.02□□□□□ -1.29
UBR1-211ENST00000569971 KLF16Q9BXK1 252 aaPredicted RBP7.02□□□□□ -1.29
UBR1-211ENST00000569971 ZBTB3Q9H5J0 574 aa7.02□□□□□ -1.29
UBR1-211ENST00000569971 NR5A1Q13285 461 aa7.01□□□□□ -1.29
UBR1-211ENST00000569971 TUSC1Q2TAM9 212 aa7.01□□□□□ -1.29
UBR1-211ENST00000569971 SH3D19Q5HYK7 790 aa7.01□□□□□ -1.29
UBR1-211ENST00000569971 TBC1D2Q9BYX2 928 aa7.01□□□□□ -1.29
UBR1-211ENST00000569971 LORP23490 312 aaPredicted RBP7□□□□□ -1.29
UBR1-211ENST00000569971 CTHP32929 405 aa6.99□□□□□ -1.29
UBR1-211ENST00000569971 WDR4P57081 412 aaKnown RBP6.99□□□□□ -1.29
UBR1-211ENST00000569971 BPHLQ86WA6 291 aaPredicted RBP6.99□□□□□ -1.29
UBR1-211ENST00000569971 PROCA1Q8NCQ7 364 aaPredicted RBP6.99□□□□□ -1.29
UBR1-211ENST00000569971 ARMC2Q8NEN0 867 aa6.99□□□□□ -1.29
UBR1-211ENST00000569971 CFAP99D6REC4 459 aa6.98□□□□□ -1.29
UBR1-211ENST00000569971 SKIV2LQ15477 1246 aaKnown RBP6.98□□□□□ -1.29
UBR1-211ENST00000569971 C1orf115Q9H7X2 142 aa6.98□□□□□ -1.29
UBR1-211ENST00000569971 POLR3EQ9NVU0 708 aa6.98□□□□□ -1.29
UBR1-211ENST00000569971 ATP1B4Q9UN42 357 aaPredicted RBP6.98□□□□□ -1.29
UBR1-211ENST00000569971 MAP4K5Q9Y4K4 846 aa6.98□□□□□ -1.29
UBR1-211ENST00000569971 UBTFP17480 764 aaKnown RBP6.97□□□□□ -1.29
UBR1-211ENST00000569971 HRCP23327 699 aa6.97□□□□□ -1.29
UBR1-211ENST00000569971 ERBB4Q15303 1308 aa6.97□□□□□ -1.29
UBR1-211ENST00000569971 ARID3CA6NKF2 412 aa6.96□□□□□ -1.3
UBR1-211ENST00000569971 NBPF14Q5TI25 921 aa6.96□□□□□ -1.3
UBR1-211ENST00000569971 PURBQ96QR8 312 aaKnown RBP6.96□□□□□ -1.3
UBR1-211ENST00000569971 ARID3AQ99856 593 aa6.96□□□□□ -1.3
UBR1-211ENST00000569971 C1QTNF2Q9BXJ5 285 aa6.96□□□□□ -1.3
UBR1-211ENST00000569971 APBB1O00213 710 aa6.95□□□□□ -1.3
UBR1-211ENST00000569971 UPP2O95045 317 aa6.95□□□□□ -1.3
UBR1-211ENST00000569971 ZIC2O95409 532 aaPredicted RBP6.95□□□□□ -1.3
UBR1-211ENST00000569971 RIC3Q7Z5B4 369 aa6.95□□□□□ -1.3
UBR1-211ENST00000569971 TRMT44Q8IYL2 757 aaKnown RBP6.95□□□□□ -1.3
UBR1-211ENST00000569971 GPKOWQ92917 476 aaPredicted RBP eCLIP6.95□□□□□ -1.3
UBR1-211ENST00000569971 CLUAP1Q96AJ1 413 aa6.95□□□□□ -1.3
UBR1-211ENST00000569971 MAP10Q9P2G4 905 aa6.95□□□□□ -1.3
UBR1-211ENST00000569971 SH3RF1Q7Z6J0 888 aa6.94□□□□□ -1.3
UBR1-211ENST00000569971 MEIOBQ8N635 442 aa6.94□□□□□ -1.3
UBR1-211ENST00000569971 FOXJ1Q92949 421 aa6.94□□□□□ -1.3
UBR1-211ENST00000569971 PCDHB15Q9Y5E8 787 aa6.94□□□□□ -1.3
UBR1-211ENST00000569971 GRM5P41594 1212 aa6.93□□□□□ -1.3
UBR1-211ENST00000569971 MYSM1Q5VVJ2 828 aa6.93□□□□□ -1.3
UBR1-211ENST00000569971 ITPKCQ96DU7 683 aa6.93□□□□□ -1.3
UBR1-211ENST00000569971 A6NJR5 290 aa6.92□□□□□ -1.3
UBR1-211ENST00000569971 MAN1A2O60476 641 aa6.92□□□□□ -1.3
UBR1-211ENST00000569971 NR3C2P08235 984 aa6.92□□□□□ -1.3
UBR1-211ENST00000569971 VEGFBP49765 207 aa6.92□□□□□ -1.3
UBR1-211ENST00000569971 MCM6Q14566 821 aa6.92□□□□□ -1.3
UBR1-211ENST00000569971 AGERQ15109 404 aa6.92□□□□□ -1.3
UBR1-211ENST00000569971 C4orf48Q5BLP8 95 aa6.92□□□□□ -1.3
UBR1-211ENST00000569971 LINC00528Q8N1L1 170 aa6.92□□□□□ -1.3
UBR1-211ENST00000569971 HELBQ8NG08 1087 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 207.7 ms