RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 DDX10Q13206 875 aaKnown RBP32.17■■■□□ 2.74
RAB40C-212ENST00000569575 CARD14Q9BXL6 1004 aa32.17■■■□□ 2.74
RAB40C-212ENST00000569575 CGNL1Q0VF96 1302 aa32.17■■■□□ 2.74
RAB40C-212ENST00000569575 TTC21BQ7Z4L5 1316 aa32.17■■■□□ 2.74
RAB40C-212ENST00000569575 NRKQ7Z2Y5 1582 aa32.15■■■□□ 2.74
RAB40C-212ENST00000569575 TRPM3Q9HCF6 1732 aaPredicted RBP32.14■■■□□ 2.74
RAB40C-212ENST00000569575 SPATA31A3Q5VYP0 1347 aa32.14■■■□□ 2.74
RAB40C-212ENST00000569575 ARHGEF10O15013 1369 aa32.14■■■□□ 2.74
RAB40C-212ENST00000569575 NPC1L1Q9UHC9 1359 aa32.14■■■□□ 2.74
RAB40C-212ENST00000569575 NSD3Q9BZ95 1437 aa32.14■■■□□ 2.74
RAB40C-212ENST00000569575 PHLPP1O60346 1717 aa32.13■■■□□ 2.73
RAB40C-212ENST00000569575 NSD2O96028 1365 aa32.13■■■□□ 2.73
RAB40C-212ENST00000569575 TNS3Q68CZ2 1445 aa32.11■■■□□ 2.73
RAB40C-212ENST00000569575 PAK3O75914 559 aaPredicted RBP32.1■■■□□ 2.73
RAB40C-212ENST00000569575 DDX17Q92841 729 aaKnown RBP32.09■■■□□ 2.73
RAB40C-212ENST00000569575 USP31Q70CQ4 1352 aa32.08■■■□□ 2.73
RAB40C-212ENST00000569575 COL16A1Q07092 1604 aaPredicted RBP32.08■■■□□ 2.73
RAB40C-212ENST00000569575 ABTB2Q8N961 1025 aa32.08■■■□□ 2.73
RAB40C-212ENST00000569575 XPCQ01831 940 aaPredicted RBP32.07■■■□□ 2.72
RAB40C-212ENST00000569575 NLRP13Q86W25 1043 aa32.07■■■□□ 2.72
RAB40C-212ENST00000569575 ALS2Q96Q42 1657 aa32.07■■■□□ 2.72
RAB40C-212ENST00000569575 FYB1O15117 783 aa32.05■■■□□ 2.72
RAB40C-212ENST00000569575 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.05■■■□□ 2.72
RAB40C-212ENST00000569575 AMER1Q5JTC6 1135 aaPredicted RBP32.03■■■□□ 2.72
RAB40C-212ENST00000569575 USP54Q70EL1 1684 aa32.02■■■□□ 2.72
RAB40C-212ENST00000569575 KIF20BQ96Q89 1820 aa32.01■■■□□ 2.72
RAB40C-212ENST00000569575 NLRP6P59044 892 aa32.01■■■□□ 2.71
RAB40C-212ENST00000569575 COG3Q96JB2 828 aa32.01■■■□□ 2.71
RAB40C-212ENST00000569575 JCADQ9P266 1359 aa31.99■■■□□ 2.71
RAB40C-212ENST00000569575 PIK3C2AO00443 1686 aa31.99■■■□□ 2.71
RAB40C-212ENST00000569575 HSPA1LP34931 641 aa31.98■■■□□ 2.71
RAB40C-212ENST00000569575 NME9Q86XW9 330 aa31.98■■■□□ 2.71
RAB40C-212ENST00000569575 MED1Q15648 1581 aaPredicted RBP31.98■■■□□ 2.71
RAB40C-212ENST00000569575 LMOD2Q6P5Q4 547 aa31.97■■■□□ 2.71
RAB40C-212ENST00000569575 KCNH5Q8NCM2 988 aa31.97■■■□□ 2.71
RAB40C-212ENST00000569575 COL22A1Q8NFW1 1626 aaPredicted RBP31.97■■■□□ 2.71
RAB40C-212ENST00000569575 OVOS2A0A0J9YW53 1432 aa31.96■■■□□ 2.71
RAB40C-212ENST00000569575 OVOS2Q6IE36 1432 aa31.96■■■□□ 2.71
RAB40C-212ENST00000569575 USP19O94966 1318 aa31.96■■■□□ 2.71
RAB40C-212ENST00000569575 PNPLA6Q8IY17 1366 aa31.95■■■□□ 2.71
RAB40C-212ENST00000569575 ANKRD26Q9UPS8 1709 aa31.95■■■□□ 2.71
RAB40C-212ENST00000569575 SHPRHQ149N8 1683 aa31.95■■■□□ 2.7
RAB40C-212ENST00000569575 GGNBP2Q9H3C7 697 aa31.93■■■□□ 2.7
RAB40C-212ENST00000569575 SPATA31A6Q5VVP1 1343 aa31.92■■■□□ 2.7
RAB40C-212ENST00000569575 RALBP1Q15311 655 aa31.9■■■□□ 2.7
RAB40C-212ENST00000569575 MORC1Q86VD1 984 aa31.9■■■□□ 2.7
RAB40C-212ENST00000569575 SLIT3O75094 1523 aa31.89■■■□□ 2.7
RAB40C-212ENST00000569575 AATKQ6ZMQ8 1374 aa31.87■■■□□ 2.69
RAB40C-212ENST00000569575 GCP02774 474 aa31.86■■■□□ 2.69
RAB40C-212ENST00000569575 CC2D1BQ5T0F9 858 aaKnown RBP31.86■■■□□ 2.69
RAB40C-212ENST00000569575 NUTM2GQ5VZR2 741 aa31.85■■■□□ 2.69
RAB40C-212ENST00000569575 MARF1Q9Y4F3 1742 aaKnown RBP31.85■■■□□ 2.69
RAB40C-212ENST00000569575 CRYBG1Q9Y4K1 1723 aa31.83■■■□□ 2.69
RAB40C-212ENST00000569575 ZRANB1Q9UGI0 708 aa31.83■■■□□ 2.69
RAB40C-212ENST00000569575 PARD3Q8TEW0 1356 aa31.82■■■□□ 2.69
RAB40C-212ENST00000569575 HAP1P54257 671 aaPredicted RBP31.82■■■□□ 2.68
RAB40C-212ENST00000569575 KIF24Q5T7B8 1368 aa31.81■■■□□ 2.68
RAB40C-212ENST00000569575 ANP32CO43423 234 aa31.81■■■□□ 2.68
RAB40C-212ENST00000569575 CPDO75976 1380 aa31.81■■■□□ 2.68
RAB40C-212ENST00000569575 PHRF1Q9P1Y6 1649 aaKnown RBP31.8■■■□□ 2.68
RAB40C-212ENST00000569575 DIEXFQ68CQ4 756 aaKnown RBP31.8■■■□□ 2.68
RAB40C-212ENST00000569575 PRKRIP1Q9H875 184 aaPredicted RBP31.78■■■□□ 2.68
RAB40C-212ENST00000569575 ABCA3Q99758 1704 aa31.78■■■□□ 2.68
RAB40C-212ENST00000569575 NFAT5O94916 1531 aa31.76■■■□□ 2.68
RAB40C-212ENST00000569575 CABLES1Q8TDN4 633 aa31.75■■■□□ 2.67
RAB40C-212ENST00000569575 ABCC6O95255 1503 aa31.75■■■□□ 2.67
RAB40C-212ENST00000569575 ARHGEF25Q86VW2 580 aa31.74■■■□□ 2.67
RAB40C-212ENST00000569575 MAP2P11137 1827 aaKnown RBP31.7■■■□□ 2.67
RAB40C-212ENST00000569575 RTL1A6NKG5 1358 aa31.7■■■□□ 2.67
RAB40C-212ENST00000569575 MYBBP1AQ9BQG0 1328 aaKnown RBP31.7■■■□□ 2.66
RAB40C-212ENST00000569575 SMG6Q86US8 1419 aaKnown RBP31.69■■■□□ 2.66
RAB40C-212ENST00000569575 POLKQ9UBT6 870 aa31.69■■■□□ 2.66
RAB40C-212ENST00000569575 PPP2R1AP30153 589 aa31.67■■■□□ 2.66
RAB40C-212ENST00000569575 PRDM11Q9NQV5 511 aa31.67■■■□□ 2.66
RAB40C-212ENST00000569575 MAP3K19Q56UN5 1328 aa31.67■■■□□ 2.66
RAB40C-212ENST00000569575 TNNT2P45379 298 aaPredicted RBP31.66■■■□□ 2.66
RAB40C-212ENST00000569575 ZC3H6P61129 1189 aaKnown RBP31.66■■■□□ 2.66
RAB40C-212ENST00000569575 KIAA0232Q92628 1395 aa31.66■■■□□ 2.66
RAB40C-212ENST00000569575 IP6K1Q92551 441 aa31.65■■■□□ 2.66
RAB40C-212ENST00000569575 LTN1O94822 1766 aa31.64■■■□□ 2.66
RAB40C-212ENST00000569575 NUTM2BA6NNL0 878 aaPredicted RBP31.64■■■□□ 2.66
RAB40C-212ENST00000569575 NUTM2EB1AL46 878 aaPredicted RBP31.64■■■□□ 2.66
RAB40C-212ENST00000569575 SOX12O15370 315 aa31.64■■■□□ 2.66
RAB40C-212ENST00000569575 AMPHP49418 695 aa31.64■■■□□ 2.66
RAB40C-212ENST00000569575 NUTM2AQ8IVF1 878 aaPredicted RBP31.64■■■□□ 2.66
RAB40C-212ENST00000569575 FLT4P35916 1363 aa31.64■■■□□ 2.66
RAB40C-212ENST00000569575 CNGB1Q14028 1251 aaPredicted RBP31.63■■■□□ 2.65
RAB40C-212ENST00000569575 INSRP06213 1382 aa31.63■■■□□ 2.65
RAB40C-212ENST00000569575 BLMP54132 1417 aaPredicted RBP31.63■■■□□ 2.65
RAB40C-212ENST00000569575 COL14A1Q05707 1796 aaKnown RBP31.63■■■□□ 2.65
RAB40C-212ENST00000569575 MTHFSP49914 203 aa31.62■■■□□ 2.65
RAB40C-212ENST00000569575 RRS1Q15050 365 aaKnown RBP31.62■■■□□ 2.65
RAB40C-212ENST00000569575 CDK12Q9NYV4 1490 aaPredicted RBP31.61■■■□□ 2.65
RAB40C-212ENST00000569575 PLEKHG5O94827 1062 aa31.61■■■□□ 2.65
RAB40C-212ENST00000569575 CFAP53Q96M91 514 aa31.61■■■□□ 2.65
RAB40C-212ENST00000569575 ADAMTS2O95450 1211 aa31.59■■■□□ 2.65
RAB40C-212ENST00000569575 ILDR1Q86SU0 546 aaPredicted RBP31.59■■■□□ 2.65
RAB40C-212ENST00000569575 FAM83GA6ND36 823 aa31.58■■■□□ 2.65
RAB40C-212ENST00000569575 HOXC9P31274 260 aa31.58■■■□□ 2.65
RAB40C-212ENST00000569575 EMILIN1Q9Y6C2 1016 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms