RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 WASHC2AQ641Q2 1341 aa14.03□□□□□ -0.16
PKM-221ENST00000568743 CCDC7Q96M83 1385 aa14.03□□□□□ -0.16
PKM-221ENST00000568743 MYOM1P52179 1685 aa14.03□□□□□ -0.16
PKM-221ENST00000568743 TRPM3Q9HCF6 1732 aaPredicted RBP14.03□□□□□ -0.16
PKM-221ENST00000568743 ANKRD36BQ8N2N9 1353 aa14.02□□□□□ -0.17
PKM-221ENST00000568743 ZNF692Q9BU19 519 aaPredicted RBP14.02□□□□□ -0.17
PKM-221ENST00000568743 TTC21BQ7Z4L5 1316 aa14.01□□□□□ -0.17
PKM-221ENST00000568743 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.01□□□□□ -0.17
PKM-221ENST00000568743 AKAP12Q02952 1782 aa14.01□□□□□ -0.17
PKM-221ENST00000568743 SSH2Q76I76 1423 aa14□□□□□ -0.17
PKM-221ENST00000568743 NUTM2BA6NNL0 878 aaPredicted RBP14□□□□□ -0.17
PKM-221ENST00000568743 NUTM2EB1AL46 878 aaPredicted RBP14□□□□□ -0.17
PKM-221ENST00000568743 NUTM2AQ8IVF1 878 aaPredicted RBP14□□□□□ -0.17
PKM-221ENST00000568743 CABLES1Q8TDN4 633 aa14□□□□□ -0.17
PKM-221ENST00000568743 ARHGEF10O15013 1369 aa13.99□□□□□ -0.17
PKM-221ENST00000568743 ABTB2Q8N961 1025 aa13.99□□□□□ -0.17
PKM-221ENST00000568743 CARD14Q9BXL6 1004 aa13.99□□□□□ -0.17
PKM-221ENST00000568743 PANK3Q9H999 370 aa13.99□□□□□ -0.17
PKM-221ENST00000568743 EDC4Q6P2E9 1401 aaKnown RBP13.98□□□□□ -0.17
PKM-221ENST00000568743 ALS2Q96Q42 1657 aa13.98□□□□□ -0.17
PKM-221ENST00000568743 NRKQ7Z2Y5 1582 aa13.98□□□□□ -0.17
PKM-221ENST00000568743 NME9Q86XW9 330 aa13.98□□□□□ -0.17
PKM-221ENST00000568743 ZRANB1Q9UGI0 708 aa13.98□□□□□ -0.17
PKM-221ENST00000568743 MON2Q7Z3U7 1717 aa13.98□□□□□ -0.17
PKM-221ENST00000568743 NSD3Q9BZ95 1437 aa13.98□□□□□ -0.17
PKM-221ENST00000568743 SHPRHQ149N8 1683 aa13.98□□□□□ -0.17
PKM-221ENST00000568743 BRD4O60885 1362 aaPredicted RBP13.96□□□□□ -0.17
PKM-221ENST00000568743 TTC21AQ8NDW8 1320 aa13.96□□□□□ -0.17
PKM-221ENST00000568743 NLRP6P59044 892 aa13.96□□□□□ -0.17
PKM-221ENST00000568743 LRP6O75581 1613 aa13.96□□□□□ -0.17
PKM-221ENST00000568743 SPATA31A6Q5VVP1 1343 aa13.95□□□□□ -0.18
PKM-221ENST00000568743 COL22A1Q8NFW1 1626 aaPredicted RBP13.95□□□□□ -0.18
PKM-221ENST00000568743 ADAMTS2O95450 1211 aa13.95□□□□□ -0.18
PKM-221ENST00000568743 HAP1P54257 671 aaPredicted RBP13.95□□□□□ -0.18
PKM-221ENST00000568743 PIK3C2AO00443 1686 aa13.95□□□□□ -0.18
PKM-221ENST00000568743 MED1Q15648 1581 aaPredicted RBP13.94□□□□□ -0.18
PKM-221ENST00000568743 SOX12O15370 315 aa13.93□□□□□ -0.18
PKM-221ENST00000568743 NLRP13Q86W25 1043 aa13.93□□□□□ -0.18
PKM-221ENST00000568743 GGNBP2Q9H3C7 697 aa13.93□□□□□ -0.18
PKM-221ENST00000568743 USP19O94966 1318 aa13.92□□□□□ -0.18
PKM-221ENST00000568743 MEX3CQ5U5Q3 659 aaKnown RBP13.92□□□□□ -0.18
PKM-221ENST00000568743 ZNF316A6NFI3 1004 aaPredicted RBP13.91□□□□□ -0.18
PKM-221ENST00000568743 FYB1O15117 783 aa13.91□□□□□ -0.18
PKM-221ENST00000568743 CGNL1Q0VF96 1302 aa13.9□□□□□ -0.18
PKM-221ENST00000568743 ABCA3Q99758 1704 aa13.9□□□□□ -0.18
PKM-221ENST00000568743 GCP02774 474 aa13.9□□□□□ -0.18
PKM-221ENST00000568743 ZC3H6P61129 1189 aaKnown RBP13.9□□□□□ -0.18
PKM-221ENST00000568743 C8orf37Q96NL8 207 aa13.9□□□□□ -0.18
PKM-221ENST00000568743 KNSTRNQ9Y448 316 aa13.9□□□□□ -0.18
PKM-221ENST00000568743 USP31Q70CQ4 1352 aa13.9□□□□□ -0.18
PKM-221ENST00000568743 ZBTB7CA1YPR0 619 aa13.89□□□□□ -0.19
PKM-221ENST00000568743 DDX10Q13206 875 aaKnown RBP13.89□□□□□ -0.19
PKM-221ENST00000568743 CNGB1Q14028 1251 aaPredicted RBP13.89□□□□□ -0.19
PKM-221ENST00000568743 COG3Q96JB2 828 aa13.89□□□□□ -0.19
PKM-221ENST00000568743 CRYBG1Q9Y4K1 1723 aa13.89□□□□□ -0.19
PKM-221ENST00000568743 OVOS2A0A0J9YW53 1432 aa13.89□□□□□ -0.19
PKM-221ENST00000568743 OVOS2Q6IE36 1432 aa13.89□□□□□ -0.19
PKM-221ENST00000568743 MARF1Q9Y4F3 1742 aaKnown RBP13.88□□□□□ -0.19
PKM-221ENST00000568743 PER1O15534 1290 aaPredicted RBP13.88□□□□□ -0.19
PKM-221ENST00000568743 PHRF1Q9P1Y6 1649 aaKnown RBP13.88□□□□□ -0.19
PKM-221ENST00000568743 SLIT3O75094 1523 aa13.88□□□□□ -0.19
PKM-221ENST00000568743 KIAA0232Q92628 1395 aa13.87□□□□□ -0.19
PKM-221ENST00000568743 FBLN1P23142 703 aa13.87□□□□□ -0.19
PKM-221ENST00000568743 CHRNA2Q15822 529 aa13.87□□□□□ -0.19
PKM-221ENST00000568743 KIF20BQ96Q89 1820 aa13.86□□□□□ -0.19
PKM-221ENST00000568743 FAM83GA6ND36 823 aa13.86□□□□□ -0.19
PKM-221ENST00000568743 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
PKM-221ENST00000568743 NGLY1Q96IV0 654 aa13.86□□□□□ -0.19
PKM-221ENST00000568743 PRDM11Q9NQV5 511 aa13.86□□□□□ -0.19
PKM-221ENST00000568743 NFAT5O94916 1531 aa13.85□□□□□ -0.19
PKM-221ENST00000568743 TNNT2P45379 298 aaPredicted RBP13.85□□□□□ -0.19
PKM-221ENST00000568743 CC2D1BQ5T0F9 858 aaKnown RBP13.85□□□□□ -0.19
PKM-221ENST00000568743 KCNH5Q8NCM2 988 aa13.85□□□□□ -0.19
PKM-221ENST00000568743 AFF2P51816 1311 aa13.85□□□□□ -0.19
PKM-221ENST00000568743 USP54Q70EL1 1684 aa13.85□□□□□ -0.19
PKM-221ENST00000568743 RRS1Q15050 365 aaKnown RBP13.83□□□□□ -0.2
PKM-221ENST00000568743 CPDO75976 1380 aa13.83□□□□□ -0.2
PKM-221ENST00000568743 NSD2O96028 1365 aa13.83□□□□□ -0.2
PKM-221ENST00000568743 MORC1Q86VD1 984 aa13.82□□□□□ -0.2
PKM-221ENST00000568743 ARHGEF25Q86VW2 580 aa13.82□□□□□ -0.2
PKM-221ENST00000568743 BTG4Q9NY30 223 aa13.81□□□□□ -0.2
PKM-221ENST00000568743 RGS17Q9UGC6 210 aaPredicted RBP13.81□□□□□ -0.2
PKM-221ENST00000568743 FNBP4Q8N3X1 1017 aaPredicted RBP13.8□□□□□ -0.2
PKM-221ENST00000568743 USP21Q9UK80 565 aa13.8□□□□□ -0.2
PKM-221ENST00000568743 MAP3K19Q56UN5 1328 aa13.8□□□□□ -0.2
PKM-221ENST00000568743 SLIT2O94813 1529 aa13.8□□□□□ -0.2
PKM-221ENST00000568743 COL14A1Q05707 1796 aaKnown RBP13.79□□□□□ -0.2
PKM-221ENST00000568743 AXIN2Q9Y2T1 843 aa13.79□□□□□ -0.2
PKM-221ENST00000568743 EMILIN1Q9Y6C2 1016 aa13.79□□□□□ -0.2
PKM-221ENST00000568743 AATKQ6ZMQ8 1374 aa13.79□□□□□ -0.2
PKM-221ENST00000568743 BCL9LQ86UU0 1499 aa13.79□□□□□ -0.2
PKM-221ENST00000568743 PLCH1Q4KWH8 1693 aa13.79□□□□□ -0.2
PKM-221ENST00000568743 AMPHP49418 695 aa13.78□□□□□ -0.2
PKM-221ENST00000568743 UNC5CLQ8IV45 518 aa13.78□□□□□ -0.2
PKM-221ENST00000568743 STRN4Q9NRL3 753 aa13.78□□□□□ -0.2
PKM-221ENST00000568743 NPC1L1Q9UHC9 1359 aa13.78□□□□□ -0.2
PKM-221ENST00000568743 CAMTA1Q9Y6Y1 1673 aa13.78□□□□□ -0.2
PKM-221ENST00000568743 ANKRD26Q9UPS8 1709 aa13.78□□□□□ -0.2
PKM-221ENST00000568743 PPM1GO15355 546 aaPredicted RBP13.77□□□□□ -0.21
PKM-221ENST00000568743 LMO7Q8WWI1 1683 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms