RNA–Protein interactions for RNA: ENST00000568656.5

NUP93-217, Transcript of nucleoporin 93, humanhuman

TSL 4

Gene NUP93, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-217ENST00000568656 SLC12A5Q9H2X9 1139 aa13.18□□□□□ -0.3
NUP93-217ENST00000568656 TIMELESSQ9UNS1 1208 aa13.17□□□□□ -0.3
NUP93-217ENST00000568656 TOPAZ1Q8N9V7 1692 aa13.17□□□□□ -0.3
NUP93-217ENST00000568656 ARHGEF10O15013 1369 aa13.17□□□□□ -0.3
NUP93-217ENST00000568656 BCL9LQ86UU0 1499 aa13.16□□□□□ -0.3
NUP93-217ENST00000568656 ABTB2Q8N961 1025 aa13.16□□□□□ -0.3
NUP93-217ENST00000568656 ZRANB1Q9UGI0 708 aa13.16□□□□□ -0.3
NUP93-217ENST00000568656 ZC3H6P61129 1189 aaKnown RBP13.15□□□□□ -0.3
NUP93-217ENST00000568656 CHRNA2Q15822 529 aa13.15□□□□□ -0.3
NUP93-217ENST00000568656 TMC1Q8TDI8 760 aa13.15□□□□□ -0.3
NUP93-217ENST00000568656 ALS2Q96Q42 1657 aa13.15□□□□□ -0.31
NUP93-217ENST00000568656 USP47Q96K76 1375 aa13.14□□□□□ -0.31
NUP93-217ENST00000568656 SBNO2Q9Y2G9 1366 aa13.13□□□□□ -0.31
NUP93-217ENST00000568656 RBM6P78332 1123 aaKnown RBP13.13□□□□□ -0.31
NUP93-217ENST00000568656 UNC5CLQ8IV45 518 aa13.13□□□□□ -0.31
NUP93-217ENST00000568656 ITSN1Q15811 1721 aa13.13□□□□□ -0.31
NUP93-217ENST00000568656 USP6P35125 1406 aa13.13□□□□□ -0.31
NUP93-217ENST00000568656 TTC21BQ7Z4L5 1316 aa13.13□□□□□ -0.31
NUP93-217ENST00000568656 NLRP6P59044 892 aa13.12□□□□□ -0.31
NUP93-217ENST00000568656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.12□□□□□ -0.31
NUP93-217ENST00000568656 BTG4Q9NY30 223 aa13.12□□□□□ -0.31
NUP93-217ENST00000568656 TRPC5Q9UL62 973 aaPredicted RBP13.12□□□□□ -0.31
NUP93-217ENST00000568656 SLIT2O94813 1529 aa13.12□□□□□ -0.31
NUP93-217ENST00000568656 ATRNO75882 1429 aa13.12□□□□□ -0.31
NUP93-217ENST00000568656 SSH2Q76I76 1423 aa13.12□□□□□ -0.31
NUP93-217ENST00000568656 GJD4Q96KN9 370 aaPredicted RBP13.11□□□□□ -0.31
NUP93-217ENST00000568656 CD163L1Q9NR16 1453 aa13.1□□□□□ -0.31
NUP93-217ENST00000568656 ATAD2Q6PL18 1390 aa13.1□□□□□ -0.31
NUP93-217ENST00000568656 KIAA0232Q92628 1395 aa13.1□□□□□ -0.31
NUP93-217ENST00000568656 ZBTB7CA1YPR0 619 aa13.1□□□□□ -0.31
NUP93-217ENST00000568656 SOX12O15370 315 aa13.1□□□□□ -0.31
NUP93-217ENST00000568656 GCP02774 474 aa13.1□□□□□ -0.31
NUP93-217ENST00000568656 NLRP13Q86W25 1043 aa13.1□□□□□ -0.31
NUP93-217ENST00000568656 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
NUP93-217ENST00000568656 PRDM11Q9NQV5 511 aa13.1□□□□□ -0.31
NUP93-217ENST00000568656 CPSF1Q10570 1443 aaKnown RBP13.1□□□□□ -0.31
NUP93-217ENST00000568656 ABCA3Q99758 1704 aa13.1□□□□□ -0.31
NUP93-217ENST00000568656 KTN1Q86UP2 1357 aaKnown RBP13.09□□□□□ -0.31
NUP93-217ENST00000568656 RGS12O14924 1447 aa13.09□□□□□ -0.31
NUP93-217ENST00000568656 HSPA5P11021 654 aaKnown RBP13.09□□□□□ -0.31
NUP93-217ENST00000568656 NME9Q86XW9 330 aa13.09□□□□□ -0.31
NUP93-217ENST00000568656 CCDC9Q9Y3X0 531 aaKnown RBP13.09□□□□□ -0.31
NUP93-217ENST00000568656 USP19O94966 1318 aa13.09□□□□□ -0.31
NUP93-217ENST00000568656 MARF1Q9Y4F3 1742 aaKnown RBP13.08□□□□□ -0.32
NUP93-217ENST00000568656 CRYBG1Q9Y4K1 1723 aa13.08□□□□□ -0.32
NUP93-217ENST00000568656 TMF1P82094 1093 aa13.07□□□□□ -0.32
NUP93-217ENST00000568656 STRN4Q9NRL3 753 aa13.07□□□□□ -0.32
NUP93-217ENST00000568656 A0A1W2PP64 1363 aa13.07□□□□□ -0.32
NUP93-217ENST00000568656 FBLN1P23142 703 aa13.06□□□□□ -0.32
NUP93-217ENST00000568656 VPS72Q15906 364 aa13.06□□□□□ -0.32
NUP93-217ENST00000568656 PUS7Q96PZ0 661 aaKnown RBP13.06□□□□□ -0.32
NUP93-217ENST00000568656 C11orf95C9JLR9 678 aaPredicted RBP13.05□□□□□ -0.32
NUP93-217ENST00000568656 HDGFL2Q7Z4V5 671 aaPredicted RBP13.05□□□□□ -0.32
NUP93-217ENST00000568656 POLR3GLQ9BT43 218 aa13.05□□□□□ -0.32
NUP93-217ENST00000568656 AXIN2Q9Y2T1 843 aa13.05□□□□□ -0.32
NUP93-217ENST00000568656 GLI3P10071 1580 aa13.04□□□□□ -0.32
NUP93-217ENST00000568656 PHRF1Q9P1Y6 1649 aaKnown RBP13.04□□□□□ -0.32
NUP93-217ENST00000568656 FAM98CQ17RN3 349 aaKnown RBP13.04□□□□□ -0.32
NUP93-217ENST00000568656 UPF1Q92900 1129 aaKnown RBP eCLIP13.04□□□□□ -0.32
NUP93-217ENST00000568656 TERF2IPQ9NYB0 399 aa13.04□□□□□ -0.32
NUP93-217ENST00000568656 PLCH1Q4KWH8 1693 aa13.04□□□□□ -0.32
NUP93-217ENST00000568656 BRD4O60885 1362 aaPredicted RBP13.04□□□□□ -0.32
NUP93-217ENST00000568656 PIK3C2AO00443 1686 aa13.03□□□□□ -0.32
NUP93-217ENST00000568656 EIF4G2P78344 907 aaKnown RBP eCLIP13.03□□□□□ -0.32
NUP93-217ENST00000568656 LARP1Q6PKG0 1096 aaKnown RBP13.03□□□□□ -0.32
NUP93-217ENST00000568656 SEPT12Q8IYM1 358 aa13.03□□□□□ -0.32
NUP93-217ENST00000568656 USP35Q9P2H5 1018 aa13.03□□□□□ -0.32
NUP93-217ENST00000568656 TTC21AQ8NDW8 1320 aa13.03□□□□□ -0.32
NUP93-217ENST00000568656 CDK12Q9NYV4 1490 aaPredicted RBP13.03□□□□□ -0.32
NUP93-217ENST00000568656 NRKQ7Z2Y5 1582 aa13.03□□□□□ -0.32
NUP93-217ENST00000568656 CAMTA1Q9Y6Y1 1673 aa13.02□□□□□ -0.32
NUP93-217ENST00000568656 AKAP12Q02952 1782 aa13.02□□□□□ -0.32
NUP93-217ENST00000568656 EVA1CP58658 441 aa13.02□□□□□ -0.33
NUP93-217ENST00000568656 CARD14Q9BXL6 1004 aa13.02□□□□□ -0.33
NUP93-217ENST00000568656 FAM182BQ5T319 152 aa13.01□□□□□ -0.33
NUP93-217ENST00000568656 ARHGEF25Q86VW2 580 aa13.01□□□□□ -0.33
NUP93-217ENST00000568656 SPATA31A5Q5VU36 1347 aa13.01□□□□□ -0.33
NUP93-217ENST00000568656 SPATA31A7Q8IWB4 1347 aa13.01□□□□□ -0.33
NUP93-217ENST00000568656 CPDO75976 1380 aa13.01□□□□□ -0.33
NUP93-217ENST00000568656 COL14A1Q05707 1796 aaKnown RBP13.01□□□□□ -0.33
NUP93-217ENST00000568656 SLIT3O75094 1523 aa13□□□□□ -0.33
NUP93-217ENST00000568656 A0A0G2JS52 829 aa13□□□□□ -0.33
NUP93-217ENST00000568656 ONECUT3O60422 494 aaPredicted RBP13□□□□□ -0.33
NUP93-217ENST00000568656 MYT1Q01538 1121 aa13□□□□□ -0.33
NUP93-217ENST00000568656 NRAPQ86VF7 1730 aa12.99□□□□□ -0.33
NUP93-217ENST00000568656 EDC4Q6P2E9 1401 aaKnown RBP12.99□□□□□ -0.33
NUP93-217ENST00000568656 USP31Q70CQ4 1352 aa12.99□□□□□ -0.33
NUP93-217ENST00000568656 SPATA31A1Q5TZJ5 1347 aa12.99□□□□□ -0.33
NUP93-217ENST00000568656 SLC24A1O60721 1099 aa12.99□□□□□ -0.33
NUP93-217ENST00000568656 GGNBP2Q9H3C7 697 aa12.99□□□□□ -0.33
NUP93-217ENST00000568656 MON2Q7Z3U7 1717 aa12.99□□□□□ -0.33
NUP93-217ENST00000568656 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.99□□□□□ -0.33
NUP93-217ENST00000568656 FYB1O15117 783 aa12.98□□□□□ -0.33
NUP93-217ENST00000568656 AATKQ6ZMQ8 1374 aa12.97□□□□□ -0.33
NUP93-217ENST00000568656 ANKRD36BQ8N2N9 1353 aa12.97□□□□□ -0.33
NUP93-217ENST00000568656 NWD2Q9ULI1 1742 aa12.97□□□□□ -0.33
NUP93-217ENST00000568656 KCNH5Q8NCM2 988 aa12.97□□□□□ -0.33
NUP93-217ENST00000568656 CDCA8Q53HL2 280 aa12.96□□□□□ -0.33
NUP93-217ENST00000568656 LMO7Q8WWI1 1683 aa12.96□□□□□ -0.34
NUP93-217ENST00000568656 NINLQ9Y2I6 1382 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms