RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 INSRP06213 1382 aa9.33□□□□□ -0.92
SMG1-215ENST00000568239 SOX12O15370 315 aa9.33□□□□□ -0.92
SMG1-215ENST00000568239 PDE3BQ13370 1112 aa9.33□□□□□ -0.92
SMG1-215ENST00000568239 KIF20BQ96Q89 1820 aa9.33□□□□□ -0.92
SMG1-215ENST00000568239 CDC42BPGQ6DT37 1551 aa9.33□□□□□ -0.92
SMG1-215ENST00000568239 HSPA2P54652 639 aa9.33□□□□□ -0.92
SMG1-215ENST00000568239 RRP7AQ9Y3A4 280 aaKnown RBP9.33□□□□□ -0.92
SMG1-215ENST00000568239 ADGRB2O60241 1585 aa9.32□□□□□ -0.92
SMG1-215ENST00000568239 ITSN1Q15811 1721 aa9.32□□□□□ -0.92
SMG1-215ENST00000568239 PLEKHG3A1L390 1219 aa9.32□□□□□ -0.92
SMG1-215ENST00000568239 XRN1Q8IZH2 1706 aaKnown RBP9.32□□□□□ -0.92
SMG1-215ENST00000568239 RRS1Q15050 365 aaKnown RBP9.31□□□□□ -0.92
SMG1-215ENST00000568239 POLKQ9UBT6 870 aa9.31□□□□□ -0.92
SMG1-215ENST00000568239 RGPD8O14715 1765 aaPredicted RBP9.31□□□□□ -0.92
SMG1-215ENST00000568239 TTC21BQ7Z4L5 1316 aa9.31□□□□□ -0.92
SMG1-215ENST00000568239 DIAPH1O60610 1272 aaKnown RBP9.31□□□□□ -0.92
SMG1-215ENST00000568239 GOLGA2Q08379 1002 aa9.31□□□□□ -0.92
SMG1-215ENST00000568239 EMILIN1Q9Y6C2 1016 aa9.31□□□□□ -0.92
SMG1-215ENST00000568239 ANKRD26Q9UPS8 1709 aa9.31□□□□□ -0.92
SMG1-215ENST00000568239 CHD2O14647 1828 aaKnown RBP9.31□□□□□ -0.92
SMG1-215ENST00000568239 RUNDC1Q96C34 613 aa9.3□□□□□ -0.92
SMG1-215ENST00000568239 PAK3O75914 559 aaPredicted RBP9.3□□□□□ -0.92
SMG1-215ENST00000568239 TCP11L2Q8N4U5 519 aa9.3□□□□□ -0.92
SMG1-215ENST00000568239 MAP2P11137 1827 aaKnown RBP9.3□□□□□ -0.92
SMG1-215ENST00000568239 NKTRP30414 1462 aaKnown RBP9.3□□□□□ -0.92
SMG1-215ENST00000568239 PROSER2Q86WR7 435 aaPredicted RBP9.3□□□□□ -0.92
SMG1-215ENST00000568239 RCAN3Q9UKA8 241 aa9.3□□□□□ -0.92
SMG1-215ENST00000568239 SHPRHQ149N8 1683 aa9.29□□□□□ -0.92
SMG1-215ENST00000568239 USP6P35125 1406 aa9.29□□□□□ -0.92
SMG1-215ENST00000568239 MON2Q7Z3U7 1717 aa9.29□□□□□ -0.92
SMG1-215ENST00000568239 AKAP12Q02952 1782 aa9.29□□□□□ -0.92
SMG1-215ENST00000568239 ESCO1Q5FWF5 840 aa9.29□□□□□ -0.92
SMG1-215ENST00000568239 NUTM2GQ5VZR2 741 aa9.29□□□□□ -0.92
SMG1-215ENST00000568239 MAPK8IP3Q9UPT6 1336 aa9.28□□□□□ -0.92
SMG1-215ENST00000568239 KDM4FA0A1W2PPD8 638 aa9.28□□□□□ -0.92
SMG1-215ENST00000568239 TOPAZ1Q8N9V7 1692 aa9.27□□□□□ -0.92
SMG1-215ENST00000568239 PLEKHG5O94827 1062 aa9.27□□□□□ -0.93
SMG1-215ENST00000568239 HMOX1P09601 288 aa9.27□□□□□ -0.93
SMG1-215ENST00000568239 WWC1Q8IX03 1113 aa9.27□□□□□ -0.93
SMG1-215ENST00000568239 PHF8Q9UPP1 1060 aa9.27□□□□□ -0.93
SMG1-215ENST00000568239 ZNF521Q96K83 1311 aa9.27□□□□□ -0.93
SMG1-215ENST00000568239 NLRP6P59044 892 aa9.27□□□□□ -0.93
SMG1-215ENST00000568239 SPINK5Q9NQ38 1064 aaPredicted RBP9.27□□□□□ -0.93
SMG1-215ENST00000568239 NALCNQ8IZF0 1738 aa9.26□□□□□ -0.93
SMG1-215ENST00000568239 NEFMP07197 916 aa9.26□□□□□ -0.93
SMG1-215ENST00000568239 DMRT2Q9Y5R5 561 aa9.26□□□□□ -0.93
SMG1-215ENST00000568239 PSME1Q06323 249 aa9.26□□□□□ -0.93
SMG1-215ENST00000568239 SLFN5Q08AF3 891 aa9.26□□□□□ -0.93
SMG1-215ENST00000568239 DUSP27Q5VZP5 1158 aa9.26□□□□□ -0.93
SMG1-215ENST00000568239 ABTB2Q8N961 1025 aa9.26□□□□□ -0.93
SMG1-215ENST00000568239 ANKARQ7Z5J8 1434 aa9.26□□□□□ -0.93
SMG1-215ENST00000568239 PNPLA6Q8IY17 1366 aa9.25□□□□□ -0.93
SMG1-215ENST00000568239 TTC21AQ8NDW8 1320 aa9.25□□□□□ -0.93
SMG1-215ENST00000568239 ADGRL3Q9HAR2 1447 aa9.25□□□□□ -0.93
SMG1-215ENST00000568239 PELP1Q8IZL8 1130 aaKnown RBP9.25□□□□□ -0.93
SMG1-215ENST00000568239 NGEFQ8N5V2 710 aa9.25□□□□□ -0.93
SMG1-215ENST00000568239 COL3A1P02461 1466 aaPredicted RBP9.25□□□□□ -0.93
SMG1-215ENST00000568239 FMN2Q9NZ56 1722 aa9.25□□□□□ -0.93
SMG1-215ENST00000568239 E9PSI1 815 aa9.24□□□□□ -0.93
SMG1-215ENST00000568239 PRKAR2BP31323 418 aa9.24□□□□□ -0.93
SMG1-215ENST00000568239 XPCQ01831 940 aaPredicted RBP9.24□□□□□ -0.93
SMG1-215ENST00000568239 ORAI2Q96SN7 254 aa9.24□□□□□ -0.93
SMG1-215ENST00000568239 PNNQ9H307 717 aaKnown RBP9.24□□□□□ -0.93
SMG1-215ENST00000568239 AATKQ6ZMQ8 1374 aa9.24□□□□□ -0.93
SMG1-215ENST00000568239 FOXO3O43524 673 aa9.24□□□□□ -0.93
SMG1-215ENST00000568239 PLIN1O60240 522 aa9.24□□□□□ -0.93
SMG1-215ENST00000568239 RRP1P56182 461 aaKnown RBP9.24□□□□□ -0.93
SMG1-215ENST00000568239 LMOD2Q6P5Q4 547 aa9.24□□□□□ -0.93
SMG1-215ENST00000568239 PLEKHF1Q96S99 279 aa9.24□□□□□ -0.93
SMG1-215ENST00000568239 FCHSD2O94868 740 aa9.23□□□□□ -0.93
SMG1-215ENST00000568239 AMPHP49418 695 aa9.23□□□□□ -0.93
SMG1-215ENST00000568239 HSP90AB2PQ58FF8 381 aa9.23□□□□□ -0.93
SMG1-215ENST00000568239 OVOS2A0A0J9YW53 1432 aa9.23□□□□□ -0.93
SMG1-215ENST00000568239 OVOS2Q6IE36 1432 aa9.23□□□□□ -0.93
SMG1-215ENST00000568239 NRKQ7Z2Y5 1582 aa9.23□□□□□ -0.93
SMG1-215ENST00000568239 IL13P35225 146 aa9.23□□□□□ -0.93
SMG1-215ENST00000568239 TMPOP42166 694 aaKnown RBP9.23□□□□□ -0.93
SMG1-215ENST00000568239 RIPK4P57078 832 aa9.23□□□□□ -0.93
SMG1-215ENST00000568239 B4GALNT3Q6L9W6 998 aa9.23□□□□□ -0.93
SMG1-215ENST00000568239 C19orf44Q9H6X5 657 aa9.23□□□□□ -0.93
SMG1-215ENST00000568239 PPP4R2Q9NY27 417 aa9.23□□□□□ -0.93
SMG1-215ENST00000568239 SSH2Q76I76 1423 aa9.23□□□□□ -0.93
SMG1-215ENST00000568239 ZBTB7CA1YPR0 619 aa9.22□□□□□ -0.93
SMG1-215ENST00000568239 ATF3P18847 181 aa9.22□□□□□ -0.93
SMG1-215ENST00000568239 RTN4Q9NQC3 1192 aaKnown RBP9.22□□□□□ -0.93
SMG1-215ENST00000568239 RNF123Q5XPI4 1314 aa9.22□□□□□ -0.93
SMG1-215ENST00000568239 CDK12Q9NYV4 1490 aaPredicted RBP9.22□□□□□ -0.93
SMG1-215ENST00000568239 ERICH6BQ5W0A0 696 aa9.22□□□□□ -0.93
SMG1-215ENST00000568239 MAP3K19Q56UN5 1328 aa9.22□□□□□ -0.93
SMG1-215ENST00000568239 RSPH6AQ9H0K4 717 aa9.21□□□□□ -0.93
SMG1-215ENST00000568239 IQSEC2Q5JU85 1478 aa9.21□□□□□ -0.93
SMG1-215ENST00000568239 TMEM94Q12767 1356 aa9.21□□□□□ -0.93
SMG1-215ENST00000568239 EIF4A2Q14240 407 aaKnown RBP9.21□□□□□ -0.94
SMG1-215ENST00000568239 SULT6B1Q6IMI4 303 aa9.21□□□□□ -0.94
SMG1-215ENST00000568239 WDR63Q8IWG1 891 aa9.21□□□□□ -0.94
SMG1-215ENST00000568239 PHACTR3Q96KR7 559 aa9.21□□□□□ -0.94
SMG1-215ENST00000568239 CCDC27Q2M243 656 aa9.2□□□□□ -0.94
SMG1-215ENST00000568239 TRMT2AQ8IZ69 625 aaKnown RBP9.2□□□□□ -0.94
SMG1-215ENST00000568239 LTV1Q96GA3 475 aaPredicted RBP9.2□□□□□ -0.94
SMG1-215ENST00000568239 USP31Q70CQ4 1352 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms