RNA–Protein interactions for RNA: ENST00000568162.5

SNUPN-210, Transcript of snurportin 1, humanhuman

TSL 3

Gene SNUPN, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-210ENST00000568162 CDK12Q9NYV4 1490 aaPredicted RBP21.38■■□□□ 1.01
SNUPN-210ENST00000568162 KCNA6P17658 529 aa21.37■■□□□ 1.01
SNUPN-210ENST00000568162 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
SNUPN-210ENST00000568162 LRRC7Q96NW7 1537 aa21.36■■□□□ 1.01
SNUPN-210ENST00000568162 USP54Q70EL1 1684 aa21.36■■□□□ 1.01
SNUPN-210ENST00000568162 SSH2Q76I76 1423 aa21.36■■□□□ 1.01
SNUPN-210ENST00000568162 ADGRL3Q9HAR2 1447 aa21.35■■□□□ 1.01
SNUPN-210ENST00000568162 RGPD8O14715 1765 aaPredicted RBP21.35■■□□□ 1.01
SNUPN-210ENST00000568162 MAP2P11137 1827 aaKnown RBP21.34■■□□□ 1.01
SNUPN-210ENST00000568162 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.34■■□□□ 1.01
SNUPN-210ENST00000568162 RUNDC1Q96C34 613 aa21.34■■□□□ 1.01
SNUPN-210ENST00000568162 OVOS2A0A0J9YW53 1432 aa21.34■■□□□ 1.01
SNUPN-210ENST00000568162 OVOS2Q6IE36 1432 aa21.34■■□□□ 1.01
SNUPN-210ENST00000568162 CCDC146Q8IYE0 955 aa21.33■■□□□ 1.01
SNUPN-210ENST00000568162 SALL2Q9Y467 1007 aaPredicted RBP21.33■■□□□ 1.01
SNUPN-210ENST00000568162 ACEP12821 1306 aa21.32■■□□□ 1
SNUPN-210ENST00000568162 NCKAP5LQ9HCH0 1330 aa21.32■■□□□ 1
SNUPN-210ENST00000568162 SENP3-EIF4A1A0A087X0R7 540 aa21.32■■□□□ 1
SNUPN-210ENST00000568162 PELP1Q8IZL8 1130 aaKnown RBP21.32■■□□□ 1
SNUPN-210ENST00000568162 TTC21BQ7Z4L5 1316 aa21.31■■□□□ 1
SNUPN-210ENST00000568162 TTC21AQ8NDW8 1320 aa21.31■■□□□ 1
SNUPN-210ENST00000568162 APAF1O14727 1248 aa21.31■■□□□ 1
SNUPN-210ENST00000568162 COG3Q96JB2 828 aa21.31■■□□□ 1
SNUPN-210ENST00000568162 GOLGA2Q08379 1002 aa21.3■■□□□ 1
SNUPN-210ENST00000568162 NME9Q86XW9 330 aa21.3■■□□□ 1
SNUPN-210ENST00000568162 CDCA7LQ96GN5 454 aa21.28■■□□□ 1
SNUPN-210ENST00000568162 RCAN3Q9UKA8 241 aa21.28■■□□□ 1
SNUPN-210ENST00000568162 USP31Q70CQ4 1352 aa21.27■■□□□ 1
SNUPN-210ENST00000568162 DIAPH1O60610 1272 aaKnown RBP21.27■■□□□ 1
SNUPN-210ENST00000568162 POLKQ9UBT6 870 aa21.27■■□□□ 1
SNUPN-210ENST00000568162 PIK3C2AO00443 1686 aa21.27■■□□□ 1
SNUPN-210ENST00000568162 CCDC27Q2M243 656 aa21.26■□□□□ 0.99
SNUPN-210ENST00000568162 U2AF1L5P0DN76 240 aaPredicted RBP21.25■□□□□ 0.99
SNUPN-210ENST00000568162 U2AF1Q01081 240 aaKnown RBP eCLIP21.25■□□□□ 0.99
SNUPN-210ENST00000568162 SLFN5Q08AF3 891 aa21.25■□□□□ 0.99
SNUPN-210ENST00000568162 DUSP27Q5VZP5 1158 aa21.25■□□□□ 0.99
SNUPN-210ENST00000568162 TRMT2AQ8IZ69 625 aaKnown RBP21.25■□□□□ 0.99
SNUPN-210ENST00000568162 PHF23Q9BUL5 403 aaPredicted RBP21.25■□□□□ 0.99
SNUPN-210ENST00000568162 PNNQ9H307 717 aaKnown RBP21.25■□□□□ 0.99
SNUPN-210ENST00000568162 E9PSI1 815 aa21.24■□□□□ 0.99
SNUPN-210ENST00000568162 RRP1P56182 461 aaKnown RBP21.24■□□□□ 0.99
SNUPN-210ENST00000568162 PPP4R2Q9NY27 417 aa21.23■□□□□ 0.99
SNUPN-210ENST00000568162 IRX6P78412 446 aaPredicted RBP21.22■□□□□ 0.99
SNUPN-210ENST00000568162 TCP11L2Q8N4U5 519 aa21.22■□□□□ 0.99
SNUPN-210ENST00000568162 MARF1Q9Y4F3 1742 aaKnown RBP21.21■□□□□ 0.99
SNUPN-210ENST00000568162 NUTM2FA1L443 756 aa21.2■□□□□ 0.98
SNUPN-210ENST00000568162 WWC1Q8IX03 1113 aa21.2■□□□□ 0.98
SNUPN-210ENST00000568162 PLEKHF1Q96S99 279 aa21.2■□□□□ 0.98
SNUPN-210ENST00000568162 ZRANB1Q9UGI0 708 aa21.2■□□□□ 0.98
SNUPN-210ENST00000568162 KIF1AQ12756 1690 aa21.2■□□□□ 0.98
SNUPN-210ENST00000568162 U2SURPO15042 1029 aaKnown RBP21.19■□□□□ 0.98
SNUPN-210ENST00000568162 WDR63Q8IWG1 891 aa21.19■□□□□ 0.98
SNUPN-210ENST00000568162 NGDNQ8NEJ9 315 aaKnown RBP21.19■□□□□ 0.98
SNUPN-210ENST00000568162 PEAK1Q9H792 1746 aa21.18■□□□□ 0.98
SNUPN-210ENST00000568162 MAPK8IP3Q9UPT6 1336 aa21.18■□□□□ 0.98
SNUPN-210ENST00000568162 NCOA3Q9Y6Q9 1424 aa21.18■□□□□ 0.98
SNUPN-210ENST00000568162 FCHSD2O94868 740 aa21.17■□□□□ 0.98
SNUPN-210ENST00000568162 EMILIN1Q9Y6C2 1016 aa21.17■□□□□ 0.98
SNUPN-210ENST00000568162 RGPD1P0DJD0 1748 aa21.16■□□□□ 0.98
SNUPN-210ENST00000568162 PMFBP1Q8TBY8 1022 aa21.16■□□□□ 0.98
SNUPN-210ENST00000568162 DCCP43146 1447 aa21.15■□□□□ 0.98
SNUPN-210ENST00000568162 IL13P35225 146 aa21.15■□□□□ 0.98
SNUPN-210ENST00000568162 KIF24Q5T7B8 1368 aa21.14■□□□□ 0.98
SNUPN-210ENST00000568162 RSPH6AQ9H0K4 717 aa21.14■□□□□ 0.97
SNUPN-210ENST00000568162 PHF8Q9UPP1 1060 aa21.14■□□□□ 0.97
SNUPN-210ENST00000568162 STRCP1A6NGW2 1772 aa21.13■□□□□ 0.97
SNUPN-210ENST00000568162 LMTK3Q96Q04 1460 aa21.12■□□□□ 0.97
SNUPN-210ENST00000568162 SBNO1A3KN83 1393 aa21.11■□□□□ 0.97
SNUPN-210ENST00000568162 PPM1GO15355 546 aaPredicted RBP21.11■□□□□ 0.97
SNUPN-210ENST00000568162 TMPOP42166 694 aaKnown RBP21.11■□□□□ 0.97
SNUPN-210ENST00000568162 RRS1Q15050 365 aaKnown RBP21.11■□□□□ 0.97
SNUPN-210ENST00000568162 SPINK5Q9NQ38 1064 aaPredicted RBP21.11■□□□□ 0.97
SNUPN-210ENST00000568162 IL16Q14005 1332 aa21.1■□□□□ 0.97
SNUPN-210ENST00000568162 NEFMP07197 916 aa21.1■□□□□ 0.97
SNUPN-210ENST00000568162 RRP7AQ9Y3A4 280 aaKnown RBP21.1■□□□□ 0.97
SNUPN-210ENST00000568162 DMRT2Q9Y5R5 561 aa21.1■□□□□ 0.97
SNUPN-210ENST00000568162 FLT4P35916 1363 aa21.1■□□□□ 0.97
SNUPN-210ENST00000568162 PHRF1Q9P1Y6 1649 aaKnown RBP21.09■□□□□ 0.97
SNUPN-210ENST00000568162 FBLN1P23142 703 aa21.09■□□□□ 0.97
SNUPN-210ENST00000568162 TRPM3Q9HCF6 1732 aaPredicted RBP21.09■□□□□ 0.97
SNUPN-210ENST00000568162 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.08■□□□□ 0.97
SNUPN-210ENST00000568162 MYH16Q9H6N6 1097 aa21.08■□□□□ 0.97
SNUPN-210ENST00000568162 PRKAR2BP31323 418 aa21.07■□□□□ 0.96
SNUPN-210ENST00000568162 NEUROD2Q15784 382 aa21.07■□□□□ 0.96
SNUPN-210ENST00000568162 PROSER2Q86WR7 435 aaPredicted RBP21.07■□□□□ 0.96
SNUPN-210ENST00000568162 STRCQ7RTU9 1775 aa21.07■□□□□ 0.96
SNUPN-210ENST00000568162 RTL1A6NKG5 1358 aa21.07■□□□□ 0.96
SNUPN-210ENST00000568162 ARHGEF10O15013 1369 aa21.07■□□□□ 0.96
SNUPN-210ENST00000568162 C14orf37Q86TY3 774 aa21.06■□□□□ 0.96
SNUPN-210ENST00000568162 C1orf167Q5SNV9 1468 aa21.06■□□□□ 0.96
SNUPN-210ENST00000568162 NFAT5O94916 1531 aa21.05■□□□□ 0.96
SNUPN-210ENST00000568162 MAP3K19Q56UN5 1328 aa21.04■□□□□ 0.96
SNUPN-210ENST00000568162 MST1RQ04912 1400 aa21.04■□□□□ 0.96
SNUPN-210ENST00000568162 KDM4FA0A1W2PPD8 638 aa21.04■□□□□ 0.96
SNUPN-210ENST00000568162 EIF4A2Q14240 407 aaKnown RBP21.04■□□□□ 0.96
SNUPN-210ENST00000568162 TRIM35Q9UPQ4 493 aa21.04■□□□□ 0.96
SNUPN-210ENST00000568162 SLIT3O75094 1523 aa21.04■□□□□ 0.96
SNUPN-210ENST00000568162 CT47B1P0C2W7 299 aaPredicted RBP21.03■□□□□ 0.96
SNUPN-210ENST00000568162 NFE2L2Q16236 605 aa21.03■□□□□ 0.96
SNUPN-210ENST00000568162 C19orf44Q9H6X5 657 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms