RNA–Protein interactions for RNA: ENST00000567813.1

EDC3-213, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-213ENST00000567813 SSH2Q76I76 1423 aa8.54□□□□□ -1.04
EDC3-213ENST00000567813 USP19O94966 1318 aa8.54□□□□□ -1.04
EDC3-213ENST00000567813 LMO7Q8WWI1 1683 aa8.53□□□□□ -1.04
EDC3-213ENST00000567813 SBNO2Q9Y2G9 1366 aa8.53□□□□□ -1.04
EDC3-213ENST00000567813 BRWD3Q6RI45 1802 aa8.53□□□□□ -1.04
EDC3-213ENST00000567813 NUDT16Q96DE0 195 aaKnown RBP8.53□□□□□ -1.04
EDC3-213ENST00000567813 CCDC61Q9Y6R9 512 aa8.53□□□□□ -1.04
EDC3-213ENST00000567813 TRPM1Q7Z4N2 1603 aa8.53□□□□□ -1.04
EDC3-213ENST00000567813 DISP2A7MBM2 1401 aa8.53□□□□□ -1.04
EDC3-213ENST00000567813 MINK1Q8N4C8 1332 aaPredicted RBP8.53□□□□□ -1.04
EDC3-213ENST00000567813 NRKQ7Z2Y5 1582 aa8.52□□□□□ -1.04
EDC3-213ENST00000567813 SAFB2Q14151 953 aaKnown RBP eCLIP8.52□□□□□ -1.05
EDC3-213ENST00000567813 PMFBP1Q8TBY8 1022 aa8.52□□□□□ -1.05
EDC3-213ENST00000567813 HIRIP3Q9BW71 556 aaPredicted RBP8.52□□□□□ -1.05
EDC3-213ENST00000567813 NBPF1Q3BBV0 1214 aa8.51□□□□□ -1.05
EDC3-213ENST00000567813 CABLES1Q8TDN4 633 aa8.51□□□□□ -1.05
EDC3-213ENST00000567813 CDK19Q9BWU1 502 aa8.51□□□□□ -1.05
EDC3-213ENST00000567813 KDM2AQ9Y2K7 1162 aa8.51□□□□□ -1.05
EDC3-213ENST00000567813 SPATA31A5Q5VU36 1347 aa8.51□□□□□ -1.05
EDC3-213ENST00000567813 SPATA31A7Q8IWB4 1347 aa8.51□□□□□ -1.05
EDC3-213ENST00000567813 SLIT3O75094 1523 aa8.5□□□□□ -1.05
EDC3-213ENST00000567813 QRICH2Q9H0J4 1663 aa8.5□□□□□ -1.05
EDC3-213ENST00000567813 NBPF8Q3BBV2 869 aa8.5□□□□□ -1.05
EDC3-213ENST00000567813 ACEP12821 1306 aa8.5□□□□□ -1.05
EDC3-213ENST00000567813 CENPJQ9HC77 1338 aaPredicted RBP8.5□□□□□ -1.05
EDC3-213ENST00000567813 SEPT12Q8IYM1 358 aa8.49□□□□□ -1.05
EDC3-213ENST00000567813 L3MBTL2Q969R5 705 aa8.49□□□□□ -1.05
EDC3-213ENST00000567813 USP54Q70EL1 1684 aa8.49□□□□□ -1.05
EDC3-213ENST00000567813 ABCC6O95255 1503 aa8.49□□□□□ -1.05
EDC3-213ENST00000567813 USP6P35125 1406 aa8.48□□□□□ -1.05
EDC3-213ENST00000567813 NGDNQ8NEJ9 315 aaKnown RBP8.48□□□□□ -1.05
EDC3-213ENST00000567813 BTG4Q9NY30 223 aa8.48□□□□□ -1.05
EDC3-213ENST00000567813 CAMTA1Q9Y6Y1 1673 aa8.48□□□□□ -1.05
EDC3-213ENST00000567813 SPATA31A1Q5TZJ5 1347 aa8.48□□□□□ -1.05
EDC3-213ENST00000567813 KIAA0232Q92628 1395 aa8.48□□□□□ -1.05
EDC3-213ENST00000567813 CPSF1Q10570 1443 aaKnown RBP8.47□□□□□ -1.05
EDC3-213ENST00000567813 PPIP5K1Q6PFW1 1433 aa8.47□□□□□ -1.05
EDC3-213ENST00000567813 TNS1Q9HBL0 1735 aaKnown RBP8.47□□□□□ -1.05
EDC3-213ENST00000567813 BARGINQ6ZT62 677 aa8.47□□□□□ -1.05
EDC3-213ENST00000567813 KRT27Q7Z3Y8 459 aa8.47□□□□□ -1.05
EDC3-213ENST00000567813 LRP5O75197 1615 aa8.47□□□□□ -1.05
EDC3-213ENST00000567813 PIK3C2AO00443 1686 aa8.46□□□□□ -1.05
EDC3-213ENST00000567813 RGPD1P0DJD0 1748 aa8.46□□□□□ -1.05
EDC3-213ENST00000567813 COL18A1P39060 1754 aa8.46□□□□□ -1.05
EDC3-213ENST00000567813 AATKQ6ZMQ8 1374 aa8.46□□□□□ -1.06
EDC3-213ENST00000567813 PARP4Q9UKK3 1724 aaKnown RBP8.46□□□□□ -1.06
EDC3-213ENST00000567813 BCL9O00512 1426 aa8.46□□□□□ -1.06
EDC3-213ENST00000567813 AKAP12Q02952 1782 aa8.45□□□□□ -1.06
EDC3-213ENST00000567813 COL5A2P05997 1499 aaPredicted RBP8.45□□□□□ -1.06
EDC3-213ENST00000567813 HAP1P54257 671 aaPredicted RBP8.45□□□□□ -1.06
EDC3-213ENST00000567813 PUS7Q96PZ0 661 aaKnown RBP8.45□□□□□ -1.06
EDC3-213ENST00000567813 PRDM11Q9NQV5 511 aa8.45□□□□□ -1.06
EDC3-213ENST00000567813 PARD3Q8TEW0 1356 aa8.45□□□□□ -1.06
EDC3-213ENST00000567813 PEAK1Q9H792 1746 aa8.44□□□□□ -1.06
EDC3-213ENST00000567813 ZRANB1Q9UGI0 708 aa8.44□□□□□ -1.06
EDC3-213ENST00000567813 THRAP3Q9Y2W1 955 aaKnown RBP8.44□□□□□ -1.06
EDC3-213ENST00000567813 CD163L1Q9NR16 1453 aa8.44□□□□□ -1.06
EDC3-213ENST00000567813 NFAT5O94916 1531 aa8.44□□□□□ -1.06
EDC3-213ENST00000567813 MON2Q7Z3U7 1717 aa8.43□□□□□ -1.06
EDC3-213ENST00000567813 RGPD3A6NKT7 1758 aaPredicted RBP8.43□□□□□ -1.06
EDC3-213ENST00000567813 RGPD4Q7Z3J3 1758 aa8.43□□□□□ -1.06
EDC3-213ENST00000567813 GCP02774 474 aa8.43□□□□□ -1.06
EDC3-213ENST00000567813 FAM98CQ17RN3 349 aaKnown RBP8.43□□□□□ -1.06
EDC3-213ENST00000567813 LMOD2Q6P5Q4 547 aa8.43□□□□□ -1.06
EDC3-213ENST00000567813 NLRP13Q86W25 1043 aa8.43□□□□□ -1.06
EDC3-213ENST00000567813 ZNF692Q9BU19 519 aaPredicted RBP8.43□□□□□ -1.06
EDC3-213ENST00000567813 EVC2Q86UK5 1308 aa8.43□□□□□ -1.06
EDC3-213ENST00000567813 USP31Q70CQ4 1352 aa8.43□□□□□ -1.06
EDC3-213ENST00000567813 ABTB2Q8N961 1025 aa8.42□□□□□ -1.06
EDC3-213ENST00000567813 CABP1Q9NZU7 370 aa8.42□□□□□ -1.06
EDC3-213ENST00000567813 TTC21AQ8NDW8 1320 aa8.42□□□□□ -1.06
EDC3-213ENST00000567813 ROCK2O75116 1388 aaKnown RBP8.42□□□□□ -1.06
EDC3-213ENST00000567813 CRB1P82279 1406 aa8.42□□□□□ -1.06
EDC3-213ENST00000567813 RREB1Q92766 1687 aa8.42□□□□□ -1.06
EDC3-213ENST00000567813 C11orf95C9JLR9 678 aaPredicted RBP8.41□□□□□ -1.06
EDC3-213ENST00000567813 PAK3O75914 559 aaPredicted RBP8.41□□□□□ -1.06
EDC3-213ENST00000567813 SRPK2P78362 688 aaKnown RBP8.41□□□□□ -1.06
EDC3-213ENST00000567813 SIN3AQ96ST3 1273 aa8.41□□□□□ -1.06
EDC3-213ENST00000567813 CABP2Q9NPB3 220 aa8.41□□□□□ -1.06
EDC3-213ENST00000567813 WNK3Q9BYP7 1800 aa8.4□□□□□ -1.06
EDC3-213ENST00000567813 TTC21BQ7Z4L5 1316 aa8.4□□□□□ -1.06
EDC3-213ENST00000567813 FAM196AQ6ZSG2 479 aa8.4□□□□□ -1.06
EDC3-213ENST00000567813 DEFB132Q7Z7B7 95 aa8.4□□□□□ -1.06
EDC3-213ENST00000567813 ARHGEF25Q86VW2 580 aa8.4□□□□□ -1.06
EDC3-213ENST00000567813 TCP11L2Q8N4U5 519 aa8.4□□□□□ -1.06
EDC3-213ENST00000567813 LRRC37A3O60309 1634 aa8.4□□□□□ -1.07
EDC3-213ENST00000567813 NINLQ9Y2I6 1382 aa8.39□□□□□ -1.07
EDC3-213ENST00000567813 BAG6P46379 1132 aa8.39□□□□□ -1.07
EDC3-213ENST00000567813 ZC3H6P61129 1189 aaKnown RBP8.39□□□□□ -1.07
EDC3-213ENST00000567813 CHRNA2Q15822 529 aa8.39□□□□□ -1.07
EDC3-213ENST00000567813 LARP1Q6PKG0 1096 aaKnown RBP8.39□□□□□ -1.07
EDC3-213ENST00000567813 CAMKK2Q96RR4 588 aa8.39□□□□□ -1.07
EDC3-213ENST00000567813 WDR17Q8IZU2 1322 aa8.38□□□□□ -1.07
EDC3-213ENST00000567813 SF3B2Q13435 895 aaKnown RBP8.38□□□□□ -1.07
EDC3-213ENST00000567813 KCNH5Q8NCM2 988 aa8.38□□□□□ -1.07
EDC3-213ENST00000567813 CCDC9Q9Y3X0 531 aaKnown RBP8.38□□□□□ -1.07
EDC3-213ENST00000567813 OVOS2A0A0J9YW53 1432 aa8.37□□□□□ -1.07
EDC3-213ENST00000567813 OVOS2Q6IE36 1432 aa8.37□□□□□ -1.07
EDC3-213ENST00000567813 EDC4Q6P2E9 1401 aaKnown RBP8.37□□□□□ -1.07
EDC3-213ENST00000567813 NUP188Q5SRE5 1749 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms