RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 EVC2Q86UK5 1308 aa15.97■□□□□ 0.15
CDH3-206ENST00000567674 CLSPNQ9HAW4 1339 aa15.97■□□□□ 0.15
CDH3-206ENST00000567674 SF3B2Q13435 895 aaKnown RBP15.97■□□□□ 0.15
CDH3-206ENST00000567674 NBPF8Q3BBV2 869 aa15.97■□□□□ 0.15
CDH3-206ENST00000567674 GJD4Q96KN9 370 aaPredicted RBP15.97■□□□□ 0.15
CDH3-206ENST00000567674 PUS7Q96PZ0 661 aaKnown RBP15.97■□□□□ 0.15
CDH3-206ENST00000567674 TRPM1Q7Z4N2 1603 aa15.97■□□□□ 0.15
CDH3-206ENST00000567674 TRPM3Q9HCF6 1732 aaPredicted RBP15.97■□□□□ 0.15
CDH3-206ENST00000567674 ZNF692Q9BU19 519 aaPredicted RBP15.96■□□□□ 0.15
CDH3-206ENST00000567674 ONECUT3O60422 494 aaPredicted RBP15.95■□□□□ 0.14
CDH3-206ENST00000567674 TONSLQ96HA7 1378 aa15.95■□□□□ 0.14
CDH3-206ENST00000567674 ALS2Q96Q42 1657 aa15.95■□□□□ 0.14
CDH3-206ENST00000567674 ACEP12821 1306 aa15.94■□□□□ 0.14
CDH3-206ENST00000567674 SRPK2P78362 688 aaKnown RBP15.94■□□□□ 0.14
CDH3-206ENST00000567674 VPS72Q15906 364 aa15.94■□□□□ 0.14
CDH3-206ENST00000567674 DEFB132Q7Z7B7 95 aa15.94■□□□□ 0.14
CDH3-206ENST00000567674 NWD2Q9ULI1 1742 aa15.94■□□□□ 0.14
CDH3-206ENST00000567674 TOPAZ1Q8N9V7 1692 aa15.93■□□□□ 0.14
CDH3-206ENST00000567674 LMOD2Q6P5Q4 547 aa15.93■□□□□ 0.14
CDH3-206ENST00000567674 FAM83GA6ND36 823 aa15.91■□□□□ 0.14
CDH3-206ENST00000567674 PPIP5K1Q6PFW1 1433 aa15.91■□□□□ 0.14
CDH3-206ENST00000567674 PAK3O75914 559 aaPredicted RBP15.9■□□□□ 0.14
CDH3-206ENST00000567674 NLRP13Q86W25 1043 aa15.9■□□□□ 0.14
CDH3-206ENST00000567674 RALGAPBQ86X10 1494 aa15.9■□□□□ 0.14
CDH3-206ENST00000567674 CABLES1Q8TDN4 633 aa15.89■□□□□ 0.13
CDH3-206ENST00000567674 CARD11Q9BXL7 1154 aa15.89■□□□□ 0.13
CDH3-206ENST00000567674 QRICH2Q9H0J4 1663 aa15.89■□□□□ 0.13
CDH3-206ENST00000567674 CABP2Q9NPB3 220 aa15.88■□□□□ 0.13
CDH3-206ENST00000567674 ABCA3Q99758 1704 aa15.88■□□□□ 0.13
CDH3-206ENST00000567674 CPDO75976 1380 aa15.87■□□□□ 0.13
CDH3-206ENST00000567674 COL14A1Q05707 1796 aaKnown RBP15.87■□□□□ 0.13
CDH3-206ENST00000567674 ABTB2Q8N961 1025 aa15.87■□□□□ 0.13
CDH3-206ENST00000567674 CABP1Q9NZU7 370 aa15.87■□□□□ 0.13
CDH3-206ENST00000567674 USP19O94966 1318 aa15.87■□□□□ 0.13
CDH3-206ENST00000567674 PSDA5PKW4 1024 aaPredicted RBP15.86■□□□□ 0.13
CDH3-206ENST00000567674 GLI3P10071 1580 aa15.86■□□□□ 0.13
CDH3-206ENST00000567674 USP6P35125 1406 aa15.85■□□□□ 0.13
CDH3-206ENST00000567674 YY1P25490 414 aa15.85■□□□□ 0.13
CDH3-206ENST00000567674 BTG4Q9NY30 223 aa15.85■□□□□ 0.13
CDH3-206ENST00000567674 TTC21AQ8NDW8 1320 aa15.85■□□□□ 0.13
CDH3-206ENST00000567674 SSH2Q76I76 1423 aa15.85■□□□□ 0.13
CDH3-206ENST00000567674 PRDM11Q9NQV5 511 aa15.84■□□□□ 0.13
CDH3-206ENST00000567674 CRYBG1Q9Y4K1 1723 aa15.84■□□□□ 0.13
CDH3-206ENST00000567674 BAG6P46379 1132 aa15.83■□□□□ 0.12
CDH3-206ENST00000567674 NINLQ9Y2I6 1382 aa15.83■□□□□ 0.12
CDH3-206ENST00000567674 CPSF1Q10570 1443 aaKnown RBP15.83■□□□□ 0.12
CDH3-206ENST00000567674 PLCH1Q4KWH8 1693 aa15.83■□□□□ 0.12
CDH3-206ENST00000567674 GCP02774 474 aa15.82■□□□□ 0.12
CDH3-206ENST00000567674 SEPT12Q8IYM1 358 aa15.82■□□□□ 0.12
CDH3-206ENST00000567674 KCNH5Q8NCM2 988 aa15.82■□□□□ 0.12
CDH3-206ENST00000567674 SPATA31A5Q5VU36 1347 aa15.81■□□□□ 0.12
CDH3-206ENST00000567674 SPATA31A7Q8IWB4 1347 aa15.81■□□□□ 0.12
CDH3-206ENST00000567674 KIAA0232Q92628 1395 aa15.8■□□□□ 0.12
CDH3-206ENST00000567674 C11orf95C9JLR9 678 aaPredicted RBP15.8■□□□□ 0.12
CDH3-206ENST00000567674 KRT27Q7Z3Y8 459 aa15.8■□□□□ 0.12
CDH3-206ENST00000567674 THRAP3Q9Y2W1 955 aaKnown RBP15.8■□□□□ 0.12
CDH3-206ENST00000567674 BRWD3Q6RI45 1802 aa15.8■□□□□ 0.12
CDH3-206ENST00000567674 CCDC9Q9Y3X0 531 aaKnown RBP15.79■□□□□ 0.12
CDH3-206ENST00000567674 PHRF1Q9P1Y6 1649 aaKnown RBP15.79■□□□□ 0.12
CDH3-206ENST00000567674 TTC21BQ7Z4L5 1316 aa15.78■□□□□ 0.12
CDH3-206ENST00000567674 NRAPQ86VF7 1730 aa15.78■□□□□ 0.12
CDH3-206ENST00000567674 NLRP6P59044 892 aa15.78■□□□□ 0.12
CDH3-206ENST00000567674 BARGINQ6ZT62 677 aa15.78■□□□□ 0.12
CDH3-206ENST00000567674 AATKQ6ZMQ8 1374 aa15.77■□□□□ 0.12
CDH3-206ENST00000567674 CDCA8Q53HL2 280 aa15.77■□□□□ 0.12
CDH3-206ENST00000567674 TERF2IPQ9NYB0 399 aa15.77■□□□□ 0.12
CDH3-206ENST00000567674 SLIT3O75094 1523 aa15.77■□□□□ 0.11
CDH3-206ENST00000567674 SPATA31A1Q5TZJ5 1347 aa15.76■□□□□ 0.11
CDH3-206ENST00000567674 ZC3H6P61129 1189 aaKnown RBP15.76■□□□□ 0.11
CDH3-206ENST00000567674 R3HDM1Q15032 1099 aaKnown RBP15.76■□□□□ 0.11
CDH3-206ENST00000567674 HDGFL2Q7Z4V5 671 aaPredicted RBP15.76■□□□□ 0.11
CDH3-206ENST00000567674 TESK2Q96S53 571 aa15.76■□□□□ 0.11
CDH3-206ENST00000567674 USP31Q70CQ4 1352 aa15.75■□□□□ 0.11
CDH3-206ENST00000567674 KTN1Q86UP2 1357 aaKnown RBP15.75■□□□□ 0.11
CDH3-206ENST00000567674 NRKQ7Z2Y5 1582 aa15.75■□□□□ 0.11
CDH3-206ENST00000567674 EVA1CP58658 441 aa15.75■□□□□ 0.11
CDH3-206ENST00000567674 ABCC6O95255 1503 aa15.74■□□□□ 0.11
CDH3-206ENST00000567674 AKAP12Q02952 1782 aa15.73■□□□□ 0.11
CDH3-206ENST00000567674 ST20-MTHFSA0A0A6YYL1 179 aa15.73■□□□□ 0.11
CDH3-206ENST00000567674 EDC4Q6P2E9 1401 aaKnown RBP15.73■□□□□ 0.11
CDH3-206ENST00000567674 TMF1P82094 1093 aa15.72■□□□□ 0.11
CDH3-206ENST00000567674 FAM98CQ17RN3 349 aaKnown RBP15.72■□□□□ 0.11
CDH3-206ENST00000567674 NUTM2GQ5VZR2 741 aa15.72■□□□□ 0.11
CDH3-206ENST00000567674 ARHGEF25Q86VW2 580 aa15.72■□□□□ 0.11
CDH3-206ENST00000567674 TCP11L2Q8N4U5 519 aa15.72■□□□□ 0.11
CDH3-206ENST00000567674 CDCA7Q9BWT1 371 aaPredicted RBP15.72■□□□□ 0.11
CDH3-206ENST00000567674 LMO7Q8WWI1 1683 aa15.72■□□□□ 0.11
CDH3-206ENST00000567674 DISP2A7MBM2 1401 aa15.71■□□□□ 0.11
CDH3-206ENST00000567674 CAMTA1Q9Y6Y1 1673 aa15.71■□□□□ 0.11
CDH3-206ENST00000567674 EN1Q05925 392 aaPredicted RBP15.71■□□□□ 0.11
CDH3-206ENST00000567674 PLEKHG5O94827 1062 aa15.7■□□□□ 0.1
CDH3-206ENST00000567674 CHRNA2Q15822 529 aa15.7■□□□□ 0.1
CDH3-206ENST00000567674 IFFO2Q5TF58 517 aa15.7■□□□□ 0.1
CDH3-206ENST00000567674 THSD7AQ9UPZ6 1657 aa15.7■□□□□ 0.1
CDH3-206ENST00000567674 CRB1P82279 1406 aa15.69■□□□□ 0.1
CDH3-206ENST00000567674 RGPD1P0DJD0 1748 aa15.69■□□□□ 0.1
CDH3-206ENST00000567674 DCAF8L1A6NGE4 600 aa15.69■□□□□ 0.1
CDH3-206ENST00000567674 FAM196AQ6ZSG2 479 aa15.69■□□□□ 0.1
CDH3-206ENST00000567674 COL5A2P05997 1499 aaPredicted RBP15.69■□□□□ 0.1
CDH3-206ENST00000567674 CD163L1Q9NR16 1453 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms