RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 ADAMTS2O95450 1211 aa21.07■□□□□ 0.96
COMMD4-219ENST00000567399 ABTB2Q8N961 1025 aa21.07■□□□□ 0.96
COMMD4-219ENST00000567399 NUTM2GQ5VZR2 741 aa21.06■□□□□ 0.96
COMMD4-219ENST00000567399 KTN1Q86UP2 1357 aaKnown RBP21.06■□□□□ 0.96
COMMD4-219ENST00000567399 MED1Q15648 1581 aaPredicted RBP21.06■□□□□ 0.96
COMMD4-219ENST00000567399 NINLQ9Y2I6 1382 aa21.05■□□□□ 0.96
COMMD4-219ENST00000567399 CABLES1Q8TDN4 633 aa21.04■□□□□ 0.96
COMMD4-219ENST00000567399 BRD4O60885 1362 aaPredicted RBP21.03■□□□□ 0.96
COMMD4-219ENST00000567399 C8orf37Q96NL8 207 aa21.03■□□□□ 0.96
COMMD4-219ENST00000567399 USP6P35125 1406 aa21.03■□□□□ 0.96
COMMD4-219ENST00000567399 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.02■□□□□ 0.96
COMMD4-219ENST00000567399 NLRP13Q86W25 1043 aa21.01■□□□□ 0.95
COMMD4-219ENST00000567399 NGLY1Q96IV0 654 aa21.01■□□□□ 0.95
COMMD4-219ENST00000567399 TRPM3Q9HCF6 1732 aaPredicted RBP21.01■□□□□ 0.95
COMMD4-219ENST00000567399 NLRP6P59044 892 aa21■□□□□ 0.95
COMMD4-219ENST00000567399 TTC21BQ7Z4L5 1316 aa21■□□□□ 0.95
COMMD4-219ENST00000567399 LRP6O75581 1613 aa21■□□□□ 0.95
COMMD4-219ENST00000567399 COL22A1Q8NFW1 1626 aaPredicted RBP21■□□□□ 0.95
COMMD4-219ENST00000567399 CPSF1Q10570 1443 aaKnown RBP20.99■□□□□ 0.95
COMMD4-219ENST00000567399 TTC21AQ8NDW8 1320 aa20.99■□□□□ 0.95
COMMD4-219ENST00000567399 A0A1W2PP64 1363 aa20.97■□□□□ 0.95
COMMD4-219ENST00000567399 ALS2Q96Q42 1657 aa20.96■□□□□ 0.95
COMMD4-219ENST00000567399 ANKRD36BQ8N2N9 1353 aa20.96■□□□□ 0.95
COMMD4-219ENST00000567399 AKAP12Q02952 1782 aa20.95■□□□□ 0.94
COMMD4-219ENST00000567399 C11orf95C9JLR9 678 aaPredicted RBP20.94■□□□□ 0.94
COMMD4-219ENST00000567399 EDC4Q6P2E9 1401 aaKnown RBP20.94■□□□□ 0.94
COMMD4-219ENST00000567399 CD163L1Q9NR16 1453 aa20.94■□□□□ 0.94
COMMD4-219ENST00000567399 ZNF772Q68DY9 489 aaPredicted RBP20.93■□□□□ 0.94
COMMD4-219ENST00000567399 AFF2P51816 1311 aa20.93■□□□□ 0.94
COMMD4-219ENST00000567399 SSH2Q76I76 1423 aa20.93■□□□□ 0.94
COMMD4-219ENST00000567399 ZBTB7CA1YPR0 619 aa20.92■□□□□ 0.94
COMMD4-219ENST00000567399 SOX12O15370 315 aa20.91■□□□□ 0.94
COMMD4-219ENST00000567399 ZC3H6P61129 1189 aaKnown RBP20.91■□□□□ 0.94
COMMD4-219ENST00000567399 NME9Q86XW9 330 aa20.91■□□□□ 0.94
COMMD4-219ENST00000567399 MON2Q7Z3U7 1717 aa20.9■□□□□ 0.94
COMMD4-219ENST00000567399 KIF7Q2M1P5 1343 aa20.9■□□□□ 0.94
COMMD4-219ENST00000567399 GCP02774 474 aa20.9■□□□□ 0.94
COMMD4-219ENST00000567399 PRDM11Q9NQV5 511 aa20.9■□□□□ 0.94
COMMD4-219ENST00000567399 USP21Q9UK80 565 aa20.9■□□□□ 0.94
COMMD4-219ENST00000567399 KCNH5Q8NCM2 988 aa20.88■□□□□ 0.93
COMMD4-219ENST00000567399 PANK3Q9H999 370 aa20.88■□□□□ 0.93
COMMD4-219ENST00000567399 ZRANB1Q9UGI0 708 aa20.88■□□□□ 0.93
COMMD4-219ENST00000567399 FAM83GA6ND36 823 aa20.87■□□□□ 0.93
COMMD4-219ENST00000567399 COG3Q96JB2 828 aa20.87■□□□□ 0.93
COMMD4-219ENST00000567399 RGS17Q9UGC6 210 aaPredicted RBP20.87■□□□□ 0.93
COMMD4-219ENST00000567399 USP19O94966 1318 aa20.86■□□□□ 0.93
COMMD4-219ENST00000567399 NRKQ7Z2Y5 1582 aa20.86■□□□□ 0.93
COMMD4-219ENST00000567399 FNBP4Q8N3X1 1017 aaPredicted RBP20.86■□□□□ 0.93
COMMD4-219ENST00000567399 QTRT2Q9H974 415 aaKnown RBP20.86■□□□□ 0.93
COMMD4-219ENST00000567399 CHRNA2Q15822 529 aa20.85■□□□□ 0.93
COMMD4-219ENST00000567399 PIK3C2AO00443 1686 aa20.85■□□□□ 0.93
COMMD4-219ENST00000567399 NSD3Q9BZ95 1437 aa20.85■□□□□ 0.93
COMMD4-219ENST00000567399 KIAA0232Q92628 1395 aa20.85■□□□□ 0.93
COMMD4-219ENST00000567399 ABCA3Q99758 1704 aa20.84■□□□□ 0.93
COMMD4-219ENST00000567399 MARF1Q9Y4F3 1742 aaKnown RBP20.84■□□□□ 0.93
COMMD4-219ENST00000567399 MYOM1P52179 1685 aa20.84■□□□□ 0.93
COMMD4-219ENST00000567399 CARD14Q9BXL6 1004 aa20.84■□□□□ 0.93
COMMD4-219ENST00000567399 PHRF1Q9P1Y6 1649 aaKnown RBP20.83■□□□□ 0.93
COMMD4-219ENST00000567399 POTEAQ6S8J7 498 aa20.83■□□□□ 0.93
COMMD4-219ENST00000567399 GGNBP2Q9H3C7 697 aa20.83■□□□□ 0.93
COMMD4-219ENST00000567399 BTG4Q9NY30 223 aa20.83■□□□□ 0.93
COMMD4-219ENST00000567399 CCDC9Q9Y3X0 531 aaKnown RBP20.83■□□□□ 0.93
COMMD4-219ENST00000567399 USP31Q70CQ4 1352 aa20.83■□□□□ 0.92
COMMD4-219ENST00000567399 CCDC7Q96M83 1385 aa20.83■□□□□ 0.92
COMMD4-219ENST00000567399 EVA1CP58658 441 aa20.82■□□□□ 0.92
COMMD4-219ENST00000567399 UNC5CLQ8IV45 518 aa20.82■□□□□ 0.92
COMMD4-219ENST00000567399 TRPC5Q9UL62 973 aaPredicted RBP20.82■□□□□ 0.92
COMMD4-219ENST00000567399 CGNL1Q0VF96 1302 aa20.81■□□□□ 0.92
COMMD4-219ENST00000567399 WASHC2AQ641Q2 1341 aa20.81■□□□□ 0.92
COMMD4-219ENST00000567399 FYB1O15117 783 aa20.81■□□□□ 0.92
COMMD4-219ENST00000567399 KNSTRNQ9Y448 316 aa20.81■□□□□ 0.92
COMMD4-219ENST00000567399 RXRBP28702 533 aa20.8■□□□□ 0.92
COMMD4-219ENST00000567399 CRYBG1Q9Y4K1 1723 aa20.8■□□□□ 0.92
COMMD4-219ENST00000567399 STRN4Q9NRL3 753 aa20.79■□□□□ 0.92
COMMD4-219ENST00000567399 SLIT3O75094 1523 aa20.78■□□□□ 0.92
COMMD4-219ENST00000567399 CPDO75976 1380 aa20.78■□□□□ 0.92
COMMD4-219ENST00000567399 COL14A1Q05707 1796 aaKnown RBP20.77■□□□□ 0.92
COMMD4-219ENST00000567399 SLIT2O94813 1529 aa20.77■□□□□ 0.92
COMMD4-219ENST00000567399 BCL9LQ86UU0 1499 aa20.76■□□□□ 0.91
COMMD4-219ENST00000567399 RBM6P78332 1123 aaKnown RBP20.76■□□□□ 0.91
COMMD4-219ENST00000567399 ARHGEF25Q86VW2 580 aa20.75■□□□□ 0.91
COMMD4-219ENST00000567399 PLCH1Q4KWH8 1693 aa20.74■□□□□ 0.91
COMMD4-219ENST00000567399 OVOS2A0A0J9YW53 1432 aa20.74■□□□□ 0.91
COMMD4-219ENST00000567399 OVOS2Q6IE36 1432 aa20.74■□□□□ 0.91
COMMD4-219ENST00000567399 AMPHP49418 695 aa20.73■□□□□ 0.91
COMMD4-219ENST00000567399 VPS72Q15906 364 aa20.73■□□□□ 0.91
COMMD4-219ENST00000567399 GJD4Q96KN9 370 aaPredicted RBP20.73■□□□□ 0.91
COMMD4-219ENST00000567399 AATKQ6ZMQ8 1374 aa20.72■□□□□ 0.91
COMMD4-219ENST00000567399 KIF20BQ96Q89 1820 aa20.72■□□□□ 0.91
COMMD4-219ENST00000567399 CSB-PGBD3P0DP91 1061 aa20.72■□□□□ 0.91
COMMD4-219ENST00000567399 ILDR2Q71H61 639 aa20.72■□□□□ 0.91
COMMD4-219ENST00000567399 NWD2Q9ULI1 1742 aa20.72■□□□□ 0.91
COMMD4-219ENST00000567399 ATRNO75882 1429 aa20.71■□□□□ 0.91
COMMD4-219ENST00000567399 FBLN1P23142 703 aa20.71■□□□□ 0.91
COMMD4-219ENST00000567399 CNGB1Q14028 1251 aaPredicted RBP20.71■□□□□ 0.91
COMMD4-219ENST00000567399 A0A0G2JS52 829 aa20.7■□□□□ 0.9
COMMD4-219ENST00000567399 TNNT2P45379 298 aaPredicted RBP20.7■□□□□ 0.9
COMMD4-219ENST00000567399 MYT1Q01538 1121 aa20.7■□□□□ 0.9
COMMD4-219ENST00000567399 MORC1Q86VD1 984 aa20.7■□□□□ 0.9
COMMD4-219ENST00000567399 USP54Q70EL1 1684 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms