RNA–Protein interactions for RNA: ENST00000567375.1

NSMCE1-212, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-212ENST00000567375 VPS72Q15906 364 aa12.61□□□□□ -0.39
NSMCE1-212ENST00000567375 PELP1Q8IZL8 1130 aaKnown RBP12.61□□□□□ -0.39
NSMCE1-212ENST00000567375 ADGRB2O60241 1585 aa12.6□□□□□ -0.39
NSMCE1-212ENST00000567375 NUP155O75694 1391 aa12.6□□□□□ -0.39
NSMCE1-212ENST00000567375 ROCK1Q13464 1354 aa12.6□□□□□ -0.39
NSMCE1-212ENST00000567375 ESCO1Q5FWF5 840 aa12.6□□□□□ -0.39
NSMCE1-212ENST00000567375 POTEB2H3BUK9 544 aa12.59□□□□□ -0.39
NSMCE1-212ENST00000567375 FOXO3O43524 673 aa12.59□□□□□ -0.39
NSMCE1-212ENST00000567375 XPCQ01831 940 aaPredicted RBP12.59□□□□□ -0.39
NSMCE1-212ENST00000567375 MS4A3Q96HJ5 214 aa12.59□□□□□ -0.39
NSMCE1-212ENST00000567375 CCDC144AA2RUR9 1427 aa12.59□□□□□ -0.39
NSMCE1-212ENST00000567375 FMN2Q9NZ56 1722 aa12.59□□□□□ -0.39
NSMCE1-212ENST00000567375 SPATA31A3Q5VYP0 1347 aa12.59□□□□□ -0.39
NSMCE1-212ENST00000567375 R3HDM1Q15032 1099 aaKnown RBP12.58□□□□□ -0.4
NSMCE1-212ENST00000567375 CCDC61Q9Y6R9 512 aa12.58□□□□□ -0.4
NSMCE1-212ENST00000567375 PPLO60437 1756 aa12.57□□□□□ -0.4
NSMCE1-212ENST00000567375 FAM50AQ14320 339 aaKnown RBP12.57□□□□□ -0.4
NSMCE1-212ENST00000567375 RREB1Q92766 1687 aa12.57□□□□□ -0.4
NSMCE1-212ENST00000567375 NAIPQ13075 1403 aa12.56□□□□□ -0.4
NSMCE1-212ENST00000567375 EN1Q05925 392 aaPredicted RBP12.56□□□□□ -0.4
NSMCE1-212ENST00000567375 THSD7AQ9UPZ6 1657 aa12.56□□□□□ -0.4
NSMCE1-212ENST00000567375 KNDC1Q76NI1 1749 aa12.56□□□□□ -0.4
NSMCE1-212ENST00000567375 TNS3Q68CZ2 1445 aa12.55□□□□□ -0.4
NSMCE1-212ENST00000567375 NUP188Q5SRE5 1749 aa12.54□□□□□ -0.4
NSMCE1-212ENST00000567375 TSPYL2Q9H2G4 693 aaPredicted RBP12.54□□□□□ -0.4
NSMCE1-212ENST00000567375 IFT172Q9UG01 1749 aa12.54□□□□□ -0.4
NSMCE1-212ENST00000567375 TECPR2O15040 1411 aa12.54□□□□□ -0.4
NSMCE1-212ENST00000567375 CCDC9Q9Y3X0 531 aaKnown RBP12.53□□□□□ -0.4
NSMCE1-212ENST00000567375 RGPD8O14715 1765 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-212ENST00000567375 COL14A1Q05707 1796 aaKnown RBP12.52□□□□□ -0.41
NSMCE1-212ENST00000567375 ASTLQ6HA08 431 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-212ENST00000567375 PARD3Q8TEW0 1356 aa12.52□□□□□ -0.41
NSMCE1-212ENST00000567375 A0A0G2JS52 829 aa12.51□□□□□ -0.41
NSMCE1-212ENST00000567375 VGFO15240 615 aaPredicted RBP12.51□□□□□ -0.41
NSMCE1-212ENST00000567375 MYT1Q01538 1121 aa12.51□□□□□ -0.41
NSMCE1-212ENST00000567375 RASEFQ8IZ41 740 aa12.51□□□□□ -0.41
NSMCE1-212ENST00000567375 NINLQ9Y2I6 1382 aa12.51□□□□□ -0.41
NSMCE1-212ENST00000567375 HAP1P54257 671 aaPredicted RBP12.5□□□□□ -0.41
NSMCE1-212ENST00000567375 FAM98CQ17RN3 349 aaKnown RBP12.5□□□□□ -0.41
NSMCE1-212ENST00000567375 MIER1Q8N108 512 aa12.5□□□□□ -0.41
NSMCE1-212ENST00000567375 CAMTA1Q9Y6Y1 1673 aa12.5□□□□□ -0.41
NSMCE1-212ENST00000567375 SBNO1A3KN83 1393 aa12.49□□□□□ -0.41
NSMCE1-212ENST00000567375 ARHGEF10O15013 1369 aa12.49□□□□□ -0.41
NSMCE1-212ENST00000567375 ATMINO43313 823 aaPredicted RBP12.49□□□□□ -0.41
NSMCE1-212ENST00000567375 EZH2Q15910 746 aaKnown RBP12.49□□□□□ -0.41
NSMCE1-212ENST00000567375 KIF12Q96FN5 646 aa12.49□□□□□ -0.41
NSMCE1-212ENST00000567375 OTUD5Q96G74 571 aa12.49□□□□□ -0.41
NSMCE1-212ENST00000567375 NRXN1Q9ULB1 1477 aa12.48□□□□□ -0.41
NSMCE1-212ENST00000567375 KRT28Q7Z3Y7 464 aa12.48□□□□□ -0.41
NSMCE1-212ENST00000567375 CABLES1Q8TDN4 633 aa12.48□□□□□ -0.41
NSMCE1-212ENST00000567375 CAMKK2Q96RR4 588 aa12.48□□□□□ -0.41
NSMCE1-212ENST00000567375 CRYBG1Q9Y4K1 1723 aa12.48□□□□□ -0.41
NSMCE1-212ENST00000567375 RPGRIP1LQ68CZ1 1315 aa12.47□□□□□ -0.41
NSMCE1-212ENST00000567375 NUTM2FA1L443 756 aa12.47□□□□□ -0.41
NSMCE1-212ENST00000567375 IFFO2Q5TF58 517 aa12.47□□□□□ -0.41
NSMCE1-212ENST00000567375 TRPM3Q9HCF6 1732 aaPredicted RBP12.47□□□□□ -0.41
NSMCE1-212ENST00000567375 ALS2Q96Q42 1657 aa12.47□□□□□ -0.41
NSMCE1-212ENST00000567375 RRBP1Q9P2E9 1410 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-212ENST00000567375 FAM83GA6ND36 823 aa12.46□□□□□ -0.41
NSMCE1-212ENST00000567375 FKBP8Q14318 412 aa12.46□□□□□ -0.41
NSMCE1-212ENST00000567375 PSME1Q06323 249 aa12.45□□□□□ -0.42
NSMCE1-212ENST00000567375 FAM182BQ5T319 152 aa12.45□□□□□ -0.42
NSMCE1-212ENST00000567375 TRPC6Q9Y210 931 aa12.45□□□□□ -0.42
NSMCE1-212ENST00000567375 PLEKHH1Q9ULM0 1364 aa12.44□□□□□ -0.42
NSMCE1-212ENST00000567375 SPATA31A5Q5VU36 1347 aa12.44□□□□□ -0.42
NSMCE1-212ENST00000567375 SPATA31A7Q8IWB4 1347 aa12.44□□□□□ -0.42
NSMCE1-212ENST00000567375 ABCC11Q96J66 1382 aa12.43□□□□□ -0.42
NSMCE1-212ENST00000567375 RGPD3A6NKT7 1758 aaPredicted RBP12.43□□□□□ -0.42
NSMCE1-212ENST00000567375 RGPD4Q7Z3J3 1758 aa12.43□□□□□ -0.42
NSMCE1-212ENST00000567375 LOC105371045A0A1W2PR82 267 aa12.43□□□□□ -0.42
NSMCE1-212ENST00000567375 WAPLQ7Z5K2 1190 aa12.43□□□□□ -0.42
NSMCE1-212ENST00000567375 BTG4Q9NY30 223 aa12.43□□□□□ -0.42
NSMCE1-212ENST00000567375 PPP1R1BQ9UD71 204 aaPredicted RBP12.43□□□□□ -0.42
NSMCE1-212ENST00000567375 CASZ1Q86V15 1759 aa12.43□□□□□ -0.42
NSMCE1-212ENST00000567375 CHD4Q14839 1912 aa12.43□□□□□ -0.42
NSMCE1-212ENST00000567375 POTEJP0CG39 1038 aa12.42□□□□□ -0.42
NSMCE1-212ENST00000567375 ZNF784Q8NCA9 323 aaPredicted RBP12.42□□□□□ -0.42
NSMCE1-212ENST00000567375 SPON1Q9HCB6 807 aa12.42□□□□□ -0.42
NSMCE1-212ENST00000567375 PHF8Q9UPP1 1060 aa12.42□□□□□ -0.42
NSMCE1-212ENST00000567375 SENP3-EIF4A1A0A087X0R7 540 aa12.41□□□□□ -0.42
NSMCE1-212ENST00000567375 TRIM37O94972 964 aa12.41□□□□□ -0.42
NSMCE1-212ENST00000567375 NUBP1P53384 320 aa12.41□□□□□ -0.42
NSMCE1-212ENST00000567375 FAM196AQ6ZSG2 479 aa12.41□□□□□ -0.42
NSMCE1-212ENST00000567375 NRKQ7Z2Y5 1582 aa12.41□□□□□ -0.42
NSMCE1-212ENST00000567375 UTRNP46939 3433 aa12.41□□□□□ -0.42
NSMCE1-212ENST00000567375 MAP3K13O43283 966 aa12.4□□□□□ -0.42
NSMCE1-212ENST00000567375 PLEKHG5O94827 1062 aa12.4□□□□□ -0.42
NSMCE1-212ENST00000567375 ATN1P54259 1190 aaPredicted RBP12.4□□□□□ -0.42
NSMCE1-212ENST00000567375 NBPF8Q3BBV2 869 aa12.4□□□□□ -0.42
NSMCE1-212ENST00000567375 NBPF14Q5TI25 921 aa12.4□□□□□ -0.42
NSMCE1-212ENST00000567375 MYOM1P52179 1685 aa12.39□□□□□ -0.43
NSMCE1-212ENST00000567375 KCNQ2O43526 872 aa12.39□□□□□ -0.43
NSMCE1-212ENST00000567375 APBA3O96018 575 aa12.39□□□□□ -0.43
NSMCE1-212ENST00000567375 STK26Q9P289 416 aa12.39□□□□□ -0.43
NSMCE1-212ENST00000567375 ANKARQ7Z5J8 1434 aa12.38□□□□□ -0.43
NSMCE1-212ENST00000567375 YTHDC2Q9H6S0 1430 aaKnown RBP12.38□□□□□ -0.43
NSMCE1-212ENST00000567375 LMOD2Q6P5Q4 547 aa12.38□□□□□ -0.43
NSMCE1-212ENST00000567375 METRNQ9UJH8 293 aa12.38□□□□□ -0.43
NSMCE1-212ENST00000567375 SPATA31A1Q5TZJ5 1347 aa12.37□□□□□ -0.43
NSMCE1-212ENST00000567375 PIK3C2GO75747 1445 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms