RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 TSR2Q969E8 191 aaKnown RBP24.22■■□□□ 1.47
MSLN-207ENST00000566549 IPO9Q96P70 1041 aaKnown RBP24.22■■□□□ 1.47
MSLN-207ENST00000566549 SETD1AO15047 1707 aaKnown RBP24.22■■□□□ 1.47
MSLN-207ENST00000566549 WASLO00401 505 aaPredicted RBP24.22■■□□□ 1.47
MSLN-207ENST00000566549 NRXN3Q9Y4C0 1643 aa24.21■■□□□ 1.47
MSLN-207ENST00000566549 MYH16Q9H6N6 1097 aa24.21■■□□□ 1.47
MSLN-207ENST00000566549 TNNQ9UQP3 1299 aa24.21■■□□□ 1.47
MSLN-207ENST00000566549 MED14O60244 1454 aa24.21■■□□□ 1.47
MSLN-207ENST00000566549 TMPOP42166 694 aaKnown RBP24.2■■□□□ 1.46
MSLN-207ENST00000566549 PDE3AQ14432 1141 aa24.2■■□□□ 1.46
MSLN-207ENST00000566549 RGS3P49796 1198 aa24.19■■□□□ 1.46
MSLN-207ENST00000566549 PPIP5K1Q6PFW1 1433 aa24.18■■□□□ 1.46
MSLN-207ENST00000566549 CEBPAP49715 358 aaPredicted RBP24.18■■□□□ 1.46
MSLN-207ENST00000566549 ZRANB1Q9UGI0 708 aa24.18■■□□□ 1.46
MSLN-207ENST00000566549 NME9Q86XW9 330 aa24.17■■□□□ 1.46
MSLN-207ENST00000566549 TRIM35Q9UPQ4 493 aa24.17■■□□□ 1.46
MSLN-207ENST00000566549 ADGRB2O60241 1585 aa24.17■■□□□ 1.46
MSLN-207ENST00000566549 HDGFP51858 240 aaKnown RBP24.16■■□□□ 1.46
MSLN-207ENST00000566549 CLUAP1Q96AJ1 413 aa24.16■■□□□ 1.46
MSLN-207ENST00000566549 POLKQ9UBT6 870 aa24.16■■□□□ 1.46
MSLN-207ENST00000566549 IGHDP01880 384 aa24.16■■□□□ 1.46
MSLN-207ENST00000566549 NUDT16Q96DE0 195 aaKnown RBP24.16■■□□□ 1.46
MSLN-207ENST00000566549 ATP7BP35670 1465 aa24.16■■□□□ 1.46
MSLN-207ENST00000566549 ANKRD26Q9UPS8 1709 aa24.15■■□□□ 1.46
MSLN-207ENST00000566549 RLBP1P12271 317 aa24.15■■□□□ 1.46
MSLN-207ENST00000566549 RIPK4P57078 832 aa24.15■■□□□ 1.46
MSLN-207ENST00000566549 TMEM2Q9UHN6 1383 aa24.15■■□□□ 1.46
MSLN-207ENST00000566549 ZBTB47Q9UFB7 747 aaPredicted RBP24.14■■□□□ 1.45
MSLN-207ENST00000566549 EMILIN1Q9Y6C2 1016 aa24.14■■□□□ 1.45
MSLN-207ENST00000566549 PNPLA6Q8IY17 1366 aa24.13■■□□□ 1.45
MSLN-207ENST00000566549 KIF20BQ96Q89 1820 aa24.12■■□□□ 1.45
MSLN-207ENST00000566549 NUTM2FA1L443 756 aa24.12■■□□□ 1.45
MSLN-207ENST00000566549 EXOSC9Q06265 439 aaKnown RBP24.12■■□□□ 1.45
MSLN-207ENST00000566549 HMOX1P09601 288 aa24.11■■□□□ 1.45
MSLN-207ENST00000566549 NCBP3Q53F19 620 aaKnown RBP24.11■■□□□ 1.45
MSLN-207ENST00000566549 LTKP29376 864 aa24.1■■□□□ 1.45
MSLN-207ENST00000566549 PRKAR2BP31323 418 aa24.1■■□□□ 1.45
MSLN-207ENST00000566549 CCDC61Q9Y6R9 512 aa24.1■■□□□ 1.45
MSLN-207ENST00000566549 CPSF1Q10570 1443 aaKnown RBP24.1■■□□□ 1.45
MSLN-207ENST00000566549 ROBO2Q9HCK4 1378 aa24.09■■□□□ 1.45
MSLN-207ENST00000566549 EDC4Q6P2E9 1401 aaKnown RBP24.09■■□□□ 1.45
MSLN-207ENST00000566549 SLC26A8Q96RN1 970 aa24.08■■□□□ 1.44
MSLN-207ENST00000566549 PRR36Q9H6K5 1346 aa24.07■■□□□ 1.44
MSLN-207ENST00000566549 RRS1Q15050 365 aaKnown RBP24.07■■□□□ 1.44
MSLN-207ENST00000566549 FAM135BQ49AJ0 1406 aa24.07■■□□□ 1.44
MSLN-207ENST00000566549 SMC4Q9NTJ3 1288 aa24.06■■□□□ 1.44
MSLN-207ENST00000566549 FCHSD2O94868 740 aa24.06■■□□□ 1.44
MSLN-207ENST00000566549 RSPH6AQ9H0K4 717 aa24.06■■□□□ 1.44
MSLN-207ENST00000566549 PNNQ9H307 717 aaKnown RBP24.05■■□□□ 1.44
MSLN-207ENST00000566549 TECPR2O15040 1411 aa24.05■■□□□ 1.44
MSLN-207ENST00000566549 COG3Q96JB2 828 aa24.05■■□□□ 1.44
MSLN-207ENST00000566549 ADAMTS13Q76LX8 1427 aa24.05■■□□□ 1.44
MSLN-207ENST00000566549 UBR1Q8IWV7 1749 aa24.05■■□□□ 1.44
MSLN-207ENST00000566549 LRRC7Q96NW7 1537 aa24.05■■□□□ 1.44
MSLN-207ENST00000566549 NBR1Q14596 966 aa24.04■■□□□ 1.44
MSLN-207ENST00000566549 PHACTR3Q96KR7 559 aa24.04■■□□□ 1.44
MSLN-207ENST00000566549 LAS1LQ9Y4W2 734 aaKnown RBP24.04■■□□□ 1.44
MSLN-207ENST00000566549 CPS1P31327 1500 aa24.04■■□□□ 1.44
MSLN-207ENST00000566549 NEFMP07197 916 aa24.03■■□□□ 1.44
MSLN-207ENST00000566549 FAM161AQ3B820 660 aa24.03■■□□□ 1.44
MSLN-207ENST00000566549 FTSJ3Q8IY81 847 aaKnown RBP24.03■■□□□ 1.44
MSLN-207ENST00000566549 PCDHB15Q9Y5E8 787 aa24.03■■□□□ 1.44
MSLN-207ENST00000566549 C8orf34Q49A92 452 aa24.03■■□□□ 1.44
MSLN-207ENST00000566549 SSH1Q8WYL5 1049 aa24.03■■□□□ 1.44
MSLN-207ENST00000566549 ZKSCAN2Q63HK3 967 aa24.02■■□□□ 1.44
MSLN-207ENST00000566549 SIRT1Q96EB6 747 aa24.02■■□□□ 1.44
MSLN-207ENST00000566549 THUMPD2Q9BTF0 503 aaKnown RBP24.01■■□□□ 1.43
MSLN-207ENST00000566549 CDC42BPGQ6DT37 1551 aa24.01■■□□□ 1.43
MSLN-207ENST00000566549 IL13P35225 146 aa24■■□□□ 1.43
MSLN-207ENST00000566549 IL16Q14005 1332 aa23.99■■□□□ 1.43
MSLN-207ENST00000566549 DZIP1LQ8IYY4 767 aaKnown RBP23.99■■□□□ 1.43
MSLN-207ENST00000566549 MVPQ14764 893 aaKnown RBP23.99■■□□□ 1.43
MSLN-207ENST00000566549 KNDC1Q76NI1 1749 aa23.98■■□□□ 1.43
MSLN-207ENST00000566549 CT47B1P0C2W7 299 aaPredicted RBP23.98■■□□□ 1.43
MSLN-207ENST00000566549 PLEKHG1Q9ULL1 1385 aa23.98■■□□□ 1.43
MSLN-207ENST00000566549 TRIM27P14373 513 aa23.97■■□□□ 1.43
MSLN-207ENST00000566549 EID1Q9Y6B2 187 aa23.97■■□□□ 1.43
MSLN-207ENST00000566549 NOB1Q9ULX3 412 aaKnown RBP23.96■■□□□ 1.43
MSLN-207ENST00000566549 MAP2P11137 1827 aaKnown RBP23.96■■□□□ 1.43
MSLN-207ENST00000566549 NFE2L2Q16236 605 aa23.96■■□□□ 1.43
MSLN-207ENST00000566549 PMFBP1Q8TBY8 1022 aa23.95■■□□□ 1.43
MSLN-207ENST00000566549 ZNF692Q9BU19 519 aaPredicted RBP23.95■■□□□ 1.43
MSLN-207ENST00000566549 ACEP12821 1306 aa23.95■■□□□ 1.42
MSLN-207ENST00000566549 SOX12O15370 315 aa23.94■■□□□ 1.42
MSLN-207ENST00000566549 ITPRIPQ8IWB1 547 aa23.94■■□□□ 1.42
MSLN-207ENST00000566549 PTPRUQ92729 1446 aa23.94■■□□□ 1.42
MSLN-207ENST00000566549 AATKQ6ZMQ8 1374 aa23.94■■□□□ 1.42
MSLN-207ENST00000566549 CDK12Q9NYV4 1490 aaPredicted RBP23.93■■□□□ 1.42
MSLN-207ENST00000566549 AMOTL2Q9Y2J4 779 aa23.93■■□□□ 1.42
MSLN-207ENST00000566549 TTC21BQ7Z4L5 1316 aa23.92■■□□□ 1.42
MSLN-207ENST00000566549 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.92■■□□□ 1.42
MSLN-207ENST00000566549 ATF7IPQ6VMQ6 1270 aa23.92■■□□□ 1.42
MSLN-207ENST00000566549 AAMPQ13685 434 aa23.91■■□□□ 1.42
MSLN-207ENST00000566549 MON2Q7Z3U7 1717 aa23.9■■□□□ 1.42
MSLN-207ENST00000566549 ELL2O00472 640 aaPredicted RBP23.89■■□□□ 1.42
MSLN-207ENST00000566549 RWDD1Q9H446 243 aaPredicted RBP23.89■■□□□ 1.42
MSLN-207ENST00000566549 TRHP20396 242 aaPredicted RBP23.89■■□□□ 1.41
MSLN-207ENST00000566549 FAM83GA6ND36 823 aa23.88■■□□□ 1.41
MSLN-207ENST00000566549 TMEM57Q8N5G2 664 aa23.88■■□□□ 1.41
MSLN-207ENST00000566549 PDZRN3Q9UPQ7 1066 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms