RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 CRYBG1Q9Y4K1 1723 aa12.85□□□□□ -0.35
SMPD3-207ENST00000566466 PER1O15534 1290 aaPredicted RBP12.84□□□□□ -0.35
SMPD3-207ENST00000566466 XPCQ01831 940 aaPredicted RBP12.84□□□□□ -0.35
SMPD3-207ENST00000566466 USP54Q70EL1 1684 aa12.83□□□□□ -0.35
SMPD3-207ENST00000566466 PHLPP1O60346 1717 aa12.83□□□□□ -0.36
SMPD3-207ENST00000566466 EDC4Q6P2E9 1401 aaKnown RBP12.83□□□□□ -0.36
SMPD3-207ENST00000566466 NSD3Q9BZ95 1437 aa12.83□□□□□ -0.36
SMPD3-207ENST00000566466 SBNO1A3KN83 1393 aa12.82□□□□□ -0.36
SMPD3-207ENST00000566466 MED1Q15648 1581 aaPredicted RBP12.82□□□□□ -0.36
SMPD3-207ENST00000566466 TMC1Q8TDI8 760 aa12.82□□□□□ -0.36
SMPD3-207ENST00000566466 PANK3Q9H999 370 aa12.82□□□□□ -0.36
SMPD3-207ENST00000566466 NPHP3Q7Z494 1330 aa12.82□□□□□ -0.36
SMPD3-207ENST00000566466 KTN1Q86UP2 1357 aaKnown RBP12.81□□□□□ -0.36
SMPD3-207ENST00000566466 COL22A1Q8NFW1 1626 aaPredicted RBP12.81□□□□□ -0.36
SMPD3-207ENST00000566466 OVOS2A0A0J9YW53 1432 aa12.81□□□□□ -0.36
SMPD3-207ENST00000566466 TNS3Q68CZ2 1445 aa12.81□□□□□ -0.36
SMPD3-207ENST00000566466 OVOS2Q6IE36 1432 aa12.81□□□□□ -0.36
SMPD3-207ENST00000566466 TTC21BQ7Z4L5 1316 aa12.81□□□□□ -0.36
SMPD3-207ENST00000566466 HSPA1LP34931 641 aa12.8□□□□□ -0.36
SMPD3-207ENST00000566466 KRT28Q7Z3Y7 464 aa12.8□□□□□ -0.36
SMPD3-207ENST00000566466 NGDNQ8NEJ9 315 aaKnown RBP12.8□□□□□ -0.36
SMPD3-207ENST00000566466 FBXO41Q8TF61 875 aa12.8□□□□□ -0.36
SMPD3-207ENST00000566466 POLR3GLQ9BT43 218 aa12.8□□□□□ -0.36
SMPD3-207ENST00000566466 SPATA31A3Q5VYP0 1347 aa12.8□□□□□ -0.36
SMPD3-207ENST00000566466 BRD4O60885 1362 aaPredicted RBP12.8□□□□□ -0.36
SMPD3-207ENST00000566466 PNPLA6Q8IY17 1366 aa12.8□□□□□ -0.36
SMPD3-207ENST00000566466 ABCA3Q99758 1704 aa12.79□□□□□ -0.36
SMPD3-207ENST00000566466 SLIT3O75094 1523 aa12.79□□□□□ -0.36
SMPD3-207ENST00000566466 AMER1Q5JTC6 1135 aaPredicted RBP12.79□□□□□ -0.36
SMPD3-207ENST00000566466 ZRANB1Q9UGI0 708 aa12.79□□□□□ -0.36
SMPD3-207ENST00000566466 USP31Q70CQ4 1352 aa12.79□□□□□ -0.36
SMPD3-207ENST00000566466 SHPRHQ149N8 1683 aa12.78□□□□□ -0.36
SMPD3-207ENST00000566466 NME9Q86XW9 330 aa12.78□□□□□ -0.36
SMPD3-207ENST00000566466 USP19O94966 1318 aa12.78□□□□□ -0.36
SMPD3-207ENST00000566466 PHRF1Q9P1Y6 1649 aaKnown RBP12.77□□□□□ -0.36
SMPD3-207ENST00000566466 ZNF692Q9BU19 519 aaPredicted RBP12.77□□□□□ -0.37
SMPD3-207ENST00000566466 TERF2IPQ9NYB0 399 aa12.77□□□□□ -0.37
SMPD3-207ENST00000566466 KIF20BQ96Q89 1820 aa12.76□□□□□ -0.37
SMPD3-207ENST00000566466 FYB1O15117 783 aa12.76□□□□□ -0.37
SMPD3-207ENST00000566466 DDX10Q13206 875 aaKnown RBP12.76□□□□□ -0.37
SMPD3-207ENST00000566466 HDGFL2Q7Z4V5 671 aaPredicted RBP12.76□□□□□ -0.37
SMPD3-207ENST00000566466 TTC21AQ8NDW8 1320 aa12.76□□□□□ -0.37
SMPD3-207ENST00000566466 NFAT5O94916 1531 aa12.76□□□□□ -0.37
SMPD3-207ENST00000566466 LRP6O75581 1613 aa12.76□□□□□ -0.37
SMPD3-207ENST00000566466 PSME1Q06323 249 aa12.75□□□□□ -0.37
SMPD3-207ENST00000566466 RNF216Q9NWF9 866 aaPredicted RBP12.75□□□□□ -0.37
SMPD3-207ENST00000566466 NPC1L1Q9UHC9 1359 aa12.75□□□□□ -0.37
SMPD3-207ENST00000566466 ANKRD26Q9UPS8 1709 aa12.75□□□□□ -0.37
SMPD3-207ENST00000566466 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMPD3-207ENST00000566466 ARHGEF10O15013 1369 aa12.72□□□□□ -0.37
SMPD3-207ENST00000566466 NUTM2GQ5VZR2 741 aa12.72□□□□□ -0.37
SMPD3-207ENST00000566466 NSD2O96028 1365 aa12.71□□□□□ -0.37
SMPD3-207ENST00000566466 JCADQ9P266 1359 aa12.71□□□□□ -0.37
SMPD3-207ENST00000566466 LRRC59Q96AG4 307 aaKnown RBP12.71□□□□□ -0.37
SMPD3-207ENST00000566466 GGNBP2Q9H3C7 697 aa12.71□□□□□ -0.37
SMPD3-207ENST00000566466 PARD3Q8TEW0 1356 aa12.7□□□□□ -0.38
SMPD3-207ENST00000566466 CGNL1Q0VF96 1302 aa12.7□□□□□ -0.38
SMPD3-207ENST00000566466 FBLN1P23142 703 aa12.7□□□□□ -0.38
SMPD3-207ENST00000566466 ABTB2Q8N961 1025 aa12.7□□□□□ -0.38
SMPD3-207ENST00000566466 CABLES1Q8TDN4 633 aa12.7□□□□□ -0.38
SMPD3-207ENST00000566466 PEAK1Q9H792 1746 aa12.7□□□□□ -0.38
SMPD3-207ENST00000566466 SMG6Q86US8 1419 aaKnown RBP12.7□□□□□ -0.38
SMPD3-207ENST00000566466 PAK3O75914 559 aaPredicted RBP12.69□□□□□ -0.38
SMPD3-207ENST00000566466 ILDR1Q86SU0 546 aaPredicted RBP12.69□□□□□ -0.38
SMPD3-207ENST00000566466 LMO7Q8WWI1 1683 aa12.69□□□□□ -0.38
SMPD3-207ENST00000566466 COL18A1P39060 1754 aa12.69□□□□□ -0.38
SMPD3-207ENST00000566466 NLRP6P59044 892 aa12.67□□□□□ -0.38
SMPD3-207ENST00000566466 KNSTRNQ9Y448 316 aa12.67□□□□□ -0.38
SMPD3-207ENST00000566466 CPDO75976 1380 aa12.67□□□□□ -0.38
SMPD3-207ENST00000566466 AATKQ6ZMQ8 1374 aa12.67□□□□□ -0.38
SMPD3-207ENST00000566466 GCP02774 474 aa12.66□□□□□ -0.38
SMPD3-207ENST00000566466 CC2D1BQ5T0F9 858 aaKnown RBP12.66□□□□□ -0.38
SMPD3-207ENST00000566466 NLRP13Q86W25 1043 aa12.65□□□□□ -0.38
SMPD3-207ENST00000566466 COL3A1P02461 1466 aaPredicted RBP12.65□□□□□ -0.38
SMPD3-207ENST00000566466 SPATA31A6Q5VVP1 1343 aa12.64□□□□□ -0.39
SMPD3-207ENST00000566466 LMOD2Q6P5Q4 547 aa12.64□□□□□ -0.39
SMPD3-207ENST00000566466 ARHGEF25Q86VW2 580 aa12.64□□□□□ -0.39
SMPD3-207ENST00000566466 COG3Q96JB2 828 aa12.64□□□□□ -0.39
SMPD3-207ENST00000566466 KIAA0232Q92628 1395 aa12.64□□□□□ -0.39
SMPD3-207ENST00000566466 MAP3K19Q56UN5 1328 aa12.63□□□□□ -0.39
SMPD3-207ENST00000566466 CAMTA1Q9Y6Y1 1673 aa12.63□□□□□ -0.39
SMPD3-207ENST00000566466 SLIT2O94813 1529 aa12.62□□□□□ -0.39
SMPD3-207ENST00000566466 ABCC6O95255 1503 aa12.62□□□□□ -0.39
SMPD3-207ENST00000566466 NRAPQ86VF7 1730 aa12.62□□□□□ -0.39
SMPD3-207ENST00000566466 LTN1O94822 1766 aa12.62□□□□□ -0.39
SMPD3-207ENST00000566466 RRS1Q15050 365 aaKnown RBP12.62□□□□□ -0.39
SMPD3-207ENST00000566466 PRKRIP1Q9H875 184 aaPredicted RBP12.62□□□□□ -0.39
SMPD3-207ENST00000566466 POLKQ9UBT6 870 aa12.62□□□□□ -0.39
SMPD3-207ENST00000566466 EMILIN1Q9Y6C2 1016 aa12.62□□□□□ -0.39
SMPD3-207ENST00000566466 PLCH1Q4KWH8 1693 aa12.61□□□□□ -0.39
SMPD3-207ENST00000566466 PLEKHG5O94827 1062 aa12.61□□□□□ -0.39
SMPD3-207ENST00000566466 AXIN2Q9Y2T1 843 aa12.61□□□□□ -0.39
SMPD3-207ENST00000566466 CDK12Q9NYV4 1490 aaPredicted RBP12.6□□□□□ -0.39
SMPD3-207ENST00000566466 FAM83GA6ND36 823 aa12.6□□□□□ -0.39
SMPD3-207ENST00000566466 SOX12O15370 315 aa12.6□□□□□ -0.39
SMPD3-207ENST00000566466 COL14A1Q05707 1796 aaKnown RBP12.6□□□□□ -0.39
SMPD3-207ENST00000566466 BCL9LQ86UU0 1499 aa12.59□□□□□ -0.39
SMPD3-207ENST00000566466 RTL1A6NKG5 1358 aa12.59□□□□□ -0.39
SMPD3-207ENST00000566466 INSRP06213 1382 aa12.59□□□□□ -0.39
SMPD3-207ENST00000566466 PPP2R1AP30153 589 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms