RNA–Protein interactions for RNA: ENST00000566408.5

STUB1-208, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 2

Gene STUB1, Length 684 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-208ENST00000566408 SPATA31A3Q5VYP0 1347 aa24.02■■□□□ 1.44
STUB1-208ENST00000566408 KTN1Q86UP2 1357 aaKnown RBP24.02■■□□□ 1.44
STUB1-208ENST00000566408 TNS3Q68CZ2 1445 aa24.01■■□□□ 1.43
STUB1-208ENST00000566408 POLR3GLQ9BT43 218 aa24■■□□□ 1.43
STUB1-208ENST00000566408 EDC4Q6P2E9 1401 aaKnown RBP24■■□□□ 1.43
STUB1-208ENST00000566408 SHPRHQ149N8 1683 aa23.99■■□□□ 1.43
STUB1-208ENST00000566408 ILDR1Q86SU0 546 aaPredicted RBP23.97■■□□□ 1.43
STUB1-208ENST00000566408 PNPLA6Q8IY17 1366 aa23.97■■□□□ 1.43
STUB1-208ENST00000566408 COL22A1Q8NFW1 1626 aaPredicted RBP23.97■■□□□ 1.43
STUB1-208ENST00000566408 JCADQ9P266 1359 aa23.96■■□□□ 1.43
STUB1-208ENST00000566408 TTC21BQ7Z4L5 1316 aa23.96■■□□□ 1.43
STUB1-208ENST00000566408 TTC21AQ8NDW8 1320 aa23.96■■□□□ 1.43
STUB1-208ENST00000566408 ARHGEF10O15013 1369 aa23.95■■□□□ 1.42
STUB1-208ENST00000566408 CARD14Q9BXL6 1004 aa23.94■■□□□ 1.42
STUB1-208ENST00000566408 MED1Q15648 1581 aaPredicted RBP23.94■■□□□ 1.42
STUB1-208ENST00000566408 PIK3C2AO00443 1686 aa23.93■■□□□ 1.42
STUB1-208ENST00000566408 PANK3Q9H999 370 aa23.93■■□□□ 1.42
STUB1-208ENST00000566408 USP54Q70EL1 1684 aa23.92■■□□□ 1.42
STUB1-208ENST00000566408 ZNF316A6NFI3 1004 aaPredicted RBP23.91■■□□□ 1.42
STUB1-208ENST00000566408 NSD3Q9BZ95 1437 aa23.91■■□□□ 1.42
STUB1-208ENST00000566408 CRYBG1Q9Y4K1 1723 aa23.9■■□□□ 1.42
STUB1-208ENST00000566408 PAK3O75914 559 aaPredicted RBP23.9■■□□□ 1.42
STUB1-208ENST00000566408 USP31Q70CQ4 1352 aa23.9■■□□□ 1.42
STUB1-208ENST00000566408 MARF1Q9Y4F3 1742 aaKnown RBP23.89■■□□□ 1.41
STUB1-208ENST00000566408 ABTB2Q8N961 1025 aa23.88■■□□□ 1.41
STUB1-208ENST00000566408 PER1O15534 1290 aaPredicted RBP23.87■■□□□ 1.41
STUB1-208ENST00000566408 ABCA3Q99758 1704 aa23.87■■□□□ 1.41
STUB1-208ENST00000566408 USP19O94966 1318 aa23.86■■□□□ 1.41
STUB1-208ENST00000566408 SPATA31A6Q5VVP1 1343 aa23.86■■□□□ 1.41
STUB1-208ENST00000566408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.86■■□□□ 1.41
STUB1-208ENST00000566408 OVOS2A0A0J9YW53 1432 aa23.85■■□□□ 1.41
STUB1-208ENST00000566408 OVOS2Q6IE36 1432 aa23.85■■□□□ 1.41
STUB1-208ENST00000566408 KIF20BQ96Q89 1820 aa23.85■■□□□ 1.41
STUB1-208ENST00000566408 SLIT3O75094 1523 aa23.84■■□□□ 1.41
STUB1-208ENST00000566408 FYB1O15117 783 aa23.84■■□□□ 1.41
STUB1-208ENST00000566408 LMOD2Q6P5Q4 547 aa23.84■■□□□ 1.41
STUB1-208ENST00000566408 NLRP13Q86W25 1043 aa23.84■■□□□ 1.41
STUB1-208ENST00000566408 NME9Q86XW9 330 aa23.84■■□□□ 1.41
STUB1-208ENST00000566408 PHRF1Q9P1Y6 1649 aaKnown RBP23.83■■□□□ 1.41
STUB1-208ENST00000566408 CGNL1Q0VF96 1302 aa23.83■■□□□ 1.4
STUB1-208ENST00000566408 NLRP6P59044 892 aa23.82■■□□□ 1.4
STUB1-208ENST00000566408 NSD2O96028 1365 aa23.8■■□□□ 1.4
STUB1-208ENST00000566408 AMER1Q5JTC6 1135 aaPredicted RBP23.8■■□□□ 1.4
STUB1-208ENST00000566408 NUTM2GQ5VZR2 741 aa23.8■■□□□ 1.4
STUB1-208ENST00000566408 ZRANB1Q9UGI0 708 aa23.8■■□□□ 1.4
STUB1-208ENST00000566408 KNSTRNQ9Y448 316 aa23.8■■□□□ 1.4
STUB1-208ENST00000566408 LRP6O75581 1613 aa23.8■■□□□ 1.4
STUB1-208ENST00000566408 NPC1L1Q9UHC9 1359 aa23.79■■□□□ 1.4
STUB1-208ENST00000566408 ANKRD26Q9UPS8 1709 aa23.79■■□□□ 1.4
STUB1-208ENST00000566408 CABLES1Q8TDN4 633 aa23.78■■□□□ 1.4
STUB1-208ENST00000566408 NFAT5O94916 1531 aa23.76■■□□□ 1.39
STUB1-208ENST00000566408 DDX10Q13206 875 aaKnown RBP23.76■■□□□ 1.39
STUB1-208ENST00000566408 GGNBP2Q9H3C7 697 aa23.76■■□□□ 1.39
STUB1-208ENST00000566408 GCP02774 474 aa23.75■■□□□ 1.39
STUB1-208ENST00000566408 COG3Q96JB2 828 aa23.75■■□□□ 1.39
STUB1-208ENST00000566408 KCNH5Q8NCM2 988 aa23.73■■□□□ 1.39
STUB1-208ENST00000566408 CPDO75976 1380 aa23.73■■□□□ 1.39
STUB1-208ENST00000566408 NUTM2BA6NNL0 878 aaPredicted RBP23.7■■□□□ 1.38
STUB1-208ENST00000566408 NUTM2EB1AL46 878 aaPredicted RBP23.7■■□□□ 1.38
STUB1-208ENST00000566408 NUTM2AQ8IVF1 878 aaPredicted RBP23.7■■□□□ 1.38
STUB1-208ENST00000566408 HAP1P54257 671 aaPredicted RBP23.68■■□□□ 1.38
STUB1-208ENST00000566408 AATKQ6ZMQ8 1374 aa23.67■■□□□ 1.38
STUB1-208ENST00000566408 ARHGEF25Q86VW2 580 aa23.67■■□□□ 1.38
STUB1-208ENST00000566408 KIAA0232Q92628 1395 aa23.66■■□□□ 1.38
STUB1-208ENST00000566408 ABCC6O95255 1503 aa23.66■■□□□ 1.38
STUB1-208ENST00000566408 PLEKHG5O94827 1062 aa23.66■■□□□ 1.38
STUB1-208ENST00000566408 ADAMTS2O95450 1211 aa23.66■■□□□ 1.38
STUB1-208ENST00000566408 COL14A1Q05707 1796 aaKnown RBP23.65■■□□□ 1.38
STUB1-208ENST00000566408 COL18A1P39060 1754 aa23.65■■□□□ 1.38
STUB1-208ENST00000566408 LMO7Q8WWI1 1683 aa23.64■■□□□ 1.38
STUB1-208ENST00000566408 ZC3H6P61129 1189 aaKnown RBP23.64■■□□□ 1.37
STUB1-208ENST00000566408 SLIT2O94813 1529 aa23.64■■□□□ 1.37
STUB1-208ENST00000566408 LTN1O94822 1766 aa23.63■■□□□ 1.37
STUB1-208ENST00000566408 FAM83GA6ND36 823 aa23.63■■□□□ 1.37
STUB1-208ENST00000566408 CC2D1BQ5T0F9 858 aaKnown RBP23.63■■□□□ 1.37
STUB1-208ENST00000566408 MORC1Q86VD1 984 aa23.62■■□□□ 1.37
STUB1-208ENST00000566408 PRDM11Q9NQV5 511 aa23.62■■□□□ 1.37
STUB1-208ENST00000566408 NWD2Q9ULI1 1742 aa23.62■■□□□ 1.37
STUB1-208ENST00000566408 PLCH1Q4KWH8 1693 aa23.61■■□□□ 1.37
STUB1-208ENST00000566408 SOX12O15370 315 aa23.61■■□□□ 1.37
STUB1-208ENST00000566408 FNBP4Q8N3X1 1017 aaPredicted RBP23.61■■□□□ 1.37
STUB1-208ENST00000566408 KIF24Q5T7B8 1368 aa23.61■■□□□ 1.37
STUB1-208ENST00000566408 SMG6Q86US8 1419 aaKnown RBP23.6■■□□□ 1.37
STUB1-208ENST00000566408 FBLN1P23142 703 aa23.6■■□□□ 1.37
STUB1-208ENST00000566408 MEX3CQ5U5Q3 659 aaKnown RBP23.6■■□□□ 1.37
STUB1-208ENST00000566408 MAP3K19Q56UN5 1328 aa23.59■■□□□ 1.37
STUB1-208ENST00000566408 MAP2P11137 1827 aaKnown RBP23.59■■□□□ 1.37
STUB1-208ENST00000566408 C8orf37Q96NL8 207 aa23.59■■□□□ 1.37
STUB1-208ENST00000566408 RTL1A6NKG5 1358 aa23.59■■□□□ 1.37
STUB1-208ENST00000566408 PARD3Q8TEW0 1356 aa23.59■■□□□ 1.37
STUB1-208ENST00000566408 NRAPQ86VF7 1730 aa23.58■■□□□ 1.37
STUB1-208ENST00000566408 CAMTA1Q9Y6Y1 1673 aa23.57■■□□□ 1.36
STUB1-208ENST00000566408 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.57■■□□□ 1.36
STUB1-208ENST00000566408 PEAK1Q9H792 1746 aa23.57■■□□□ 1.36
STUB1-208ENST00000566408 RRS1Q15050 365 aaKnown RBP23.57■■□□□ 1.36
STUB1-208ENST00000566408 CHRNA2Q15822 529 aa23.57■■□□□ 1.36
STUB1-208ENST00000566408 BCL9LQ86UU0 1499 aa23.56■■□□□ 1.36
STUB1-208ENST00000566408 NGLY1Q96IV0 654 aa23.56■■□□□ 1.36
STUB1-208ENST00000566408 POLKQ9UBT6 870 aa23.56■■□□□ 1.36
STUB1-208ENST00000566408 IP6K1Q92551 441 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms