RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 INSRP06213 1382 aa22.87■■□□□ 1.25
RAB40C-210ENST00000566290 NUTM2FA1L443 756 aa22.86■■□□□ 1.25
RAB40C-210ENST00000566290 USP32Q8NFA0 1604 aa22.86■■□□□ 1.25
RAB40C-210ENST00000566290 MYBBP1AQ9BQG0 1328 aaKnown RBP22.85■■□□□ 1.25
RAB40C-210ENST00000566290 COL22A1Q8NFW1 1626 aaPredicted RBP22.85■■□□□ 1.25
RAB40C-210ENST00000566290 PSDA5PKW4 1024 aaPredicted RBP22.83■■□□□ 1.25
RAB40C-210ENST00000566290 POLR3GLQ9BT43 218 aa22.82■■□□□ 1.24
RAB40C-210ENST00000566290 MRS2Q9HD23 443 aa22.81■■□□□ 1.24
RAB40C-210ENST00000566290 POGKQ9P215 609 aa22.81■■□□□ 1.24
RAB40C-210ENST00000566290 FMN2Q9NZ56 1722 aa22.81■■□□□ 1.24
RAB40C-210ENST00000566290 NINLQ9Y2I6 1382 aa22.8■■□□□ 1.24
RAB40C-210ENST00000566290 SF3B2Q13435 895 aaKnown RBP22.8■■□□□ 1.24
RAB40C-210ENST00000566290 ESCO1Q5FWF5 840 aa22.8■■□□□ 1.24
RAB40C-210ENST00000566290 GLI3P10071 1580 aa22.8■■□□□ 1.24
RAB40C-210ENST00000566290 TULP4Q9NRJ4 1543 aa22.79■■□□□ 1.24
RAB40C-210ENST00000566290 BRWD3Q6RI45 1802 aa22.79■■□□□ 1.24
RAB40C-210ENST00000566290 MARF1Q9Y4F3 1742 aaKnown RBP22.79■■□□□ 1.24
RAB40C-210ENST00000566290 NLRP13Q86W25 1043 aa22.77■■□□□ 1.24
RAB40C-210ENST00000566290 UNC5CLQ8IV45 518 aa22.77■■□□□ 1.24
RAB40C-210ENST00000566290 PANK3Q9H999 370 aa22.77■■□□□ 1.24
RAB40C-210ENST00000566290 MINK1Q8N4C8 1332 aaPredicted RBP22.77■■□□□ 1.24
RAB40C-210ENST00000566290 XPCQ01831 940 aaPredicted RBP22.76■■□□□ 1.23
RAB40C-210ENST00000566290 SEPT12Q8IYM1 358 aa22.75■■□□□ 1.23
RAB40C-210ENST00000566290 ADGRB2O60241 1585 aa22.75■■□□□ 1.23
RAB40C-210ENST00000566290 RGPD8O14715 1765 aaPredicted RBP22.74■■□□□ 1.23
RAB40C-210ENST00000566290 CCDC184Q52MB2 194 aa22.73■■□□□ 1.23
RAB40C-210ENST00000566290 PXDNQ92626 1479 aa22.73■■□□□ 1.23
RAB40C-210ENST00000566290 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.72■■□□□ 1.23
RAB40C-210ENST00000566290 FOXO3O43524 673 aa22.72■■□□□ 1.23
RAB40C-210ENST00000566290 NPHP3Q7Z494 1330 aa22.72■■□□□ 1.23
RAB40C-210ENST00000566290 SLIT2O94813 1529 aa22.72■■□□□ 1.23
RAB40C-210ENST00000566290 EVC2Q86UK5 1308 aa22.71■■□□□ 1.23
RAB40C-210ENST00000566290 AMER1Q5JTC6 1135 aaPredicted RBP22.7■■□□□ 1.22
RAB40C-210ENST00000566290 ZBED9Q6R2W3 1325 aa22.7■■□□□ 1.22
RAB40C-210ENST00000566290 PRR36Q9H6K5 1346 aa22.7■■□□□ 1.22
RAB40C-210ENST00000566290 PNISRQ8TF01 805 aaKnown RBP22.69■■□□□ 1.22
RAB40C-210ENST00000566290 KNSTRNQ9Y448 316 aa22.69■■□□□ 1.22
RAB40C-210ENST00000566290 GTF3C3Q9Y5Q9 886 aa22.69■■□□□ 1.22
RAB40C-210ENST00000566290 WASLO00401 505 aaPredicted RBP22.68■■□□□ 1.22
RAB40C-210ENST00000566290 KRT27Q7Z3Y8 459 aa22.67■■□□□ 1.22
RAB40C-210ENST00000566290 ONECUT3O60422 494 aaPredicted RBP22.66■■□□□ 1.22
RAB40C-210ENST00000566290 PHF8Q9UPP1 1060 aa22.66■■□□□ 1.22
RAB40C-210ENST00000566290 NSD2O96028 1365 aa22.65■■□□□ 1.22
RAB40C-210ENST00000566290 TMC1Q8TDI8 760 aa22.65■■□□□ 1.22
RAB40C-210ENST00000566290 ANKARQ7Z5J8 1434 aa22.65■■□□□ 1.22
RAB40C-210ENST00000566290 KIF1AQ12756 1690 aa22.65■■□□□ 1.22
RAB40C-210ENST00000566290 BAG6P46379 1132 aa22.64■■□□□ 1.21
RAB40C-210ENST00000566290 HNRNPUQ00839 825 aaKnown RBP eCLIP22.64■■□□□ 1.21
RAB40C-210ENST00000566290 PMFBP1Q8TBY8 1022 aa22.64■■□□□ 1.21
RAB40C-210ENST00000566290 ANKRD36BQ8N2N9 1353 aa22.63■■□□□ 1.21
RAB40C-210ENST00000566290 R3HDM1Q15032 1099 aaKnown RBP22.63■■□□□ 1.21
RAB40C-210ENST00000566290 VPS72Q15906 364 aa22.63■■□□□ 1.21
RAB40C-210ENST00000566290 EN1Q05925 392 aaPredicted RBP22.62■■□□□ 1.21
RAB40C-210ENST00000566290 YY1P25490 414 aa22.61■■□□□ 1.21
RAB40C-210ENST00000566290 KRT28Q7Z3Y7 464 aa22.61■■□□□ 1.21
RAB40C-210ENST00000566290 CDK19Q9BWU1 502 aa22.61■■□□□ 1.21
RAB40C-210ENST00000566290 CCDC9Q9Y3X0 531 aaKnown RBP22.6■■□□□ 1.21
RAB40C-210ENST00000566290 ATP7BP35670 1465 aa22.6■■□□□ 1.21
RAB40C-210ENST00000566290 SPATA31A3Q5VYP0 1347 aa22.59■■□□□ 1.21
RAB40C-210ENST00000566290 NUDT16Q96DE0 195 aaKnown RBP22.58■■□□□ 1.21
RAB40C-210ENST00000566290 FAM9BQ8IZU0 186 aa22.57■■□□□ 1.2
RAB40C-210ENST00000566290 ANKRD26Q9UPS8 1709 aa22.57■■□□□ 1.2
RAB40C-210ENST00000566290 CABLES1Q8TDN4 633 aa22.56■■□□□ 1.2
RAB40C-210ENST00000566290 PLEKHG5O94827 1062 aa22.55■■□□□ 1.2
RAB40C-210ENST00000566290 NSD3Q9BZ95 1437 aa22.55■■□□□ 1.2
RAB40C-210ENST00000566290 PSME1Q06323 249 aa22.54■■□□□ 1.2
RAB40C-210ENST00000566290 CARD14Q9BXL6 1004 aa22.54■■□□□ 1.2
RAB40C-210ENST00000566290 A0A0G2JS52 829 aa22.53■■□□□ 1.2
RAB40C-210ENST00000566290 MYT1Q01538 1121 aa22.53■■□□□ 1.2
RAB40C-210ENST00000566290 CC2D1BQ5T0F9 858 aaKnown RBP22.53■■□□□ 1.2
RAB40C-210ENST00000566290 FAM182BQ5T319 152 aa22.53■■□□□ 1.2
RAB40C-210ENST00000566290 CABP2Q9NPB3 220 aa22.53■■□□□ 1.2
RAB40C-210ENST00000566290 PPP2R1AP30153 589 aa22.52■■□□□ 1.2
RAB40C-210ENST00000566290 TOPAZ1Q8N9V7 1692 aa22.52■■□□□ 1.2
RAB40C-210ENST00000566290 TRPM3Q9HCF6 1732 aaPredicted RBP22.51■■□□□ 1.19
RAB40C-210ENST00000566290 TNS3Q68CZ2 1445 aa22.51■■□□□ 1.19
RAB40C-210ENST00000566290 HAP1P54257 671 aaPredicted RBP22.51■■□□□ 1.19
RAB40C-210ENST00000566290 CD163L1Q9NR16 1453 aa22.51■■□□□ 1.19
RAB40C-210ENST00000566290 CGNL1Q0VF96 1302 aa22.51■■□□□ 1.19
RAB40C-210ENST00000566290 SBNO1A3KN83 1393 aa22.5■■□□□ 1.19
RAB40C-210ENST00000566290 FAM98CQ17RN3 349 aaKnown RBP22.5■■□□□ 1.19
RAB40C-210ENST00000566290 SMG6Q86US8 1419 aaKnown RBP22.49■■□□□ 1.19
RAB40C-210ENST00000566290 PLCH1Q4KWH8 1693 aa22.49■■□□□ 1.19
RAB40C-210ENST00000566290 ITSN1Q15811 1721 aa22.49■■□□□ 1.19
RAB40C-210ENST00000566290 SRPK2P78362 688 aaKnown RBP22.49■■□□□ 1.19
RAB40C-210ENST00000566290 EZH2Q15910 746 aaKnown RBP22.49■■□□□ 1.19
RAB40C-210ENST00000566290 NGDNQ8NEJ9 315 aaKnown RBP22.49■■□□□ 1.19
RAB40C-210ENST00000566290 POLR3AO14802 1390 aaPredicted RBP22.49■■□□□ 1.19
RAB40C-210ENST00000566290 FAM83GA6ND36 823 aa22.48■■□□□ 1.19
RAB40C-210ENST00000566290 CCDC61Q9Y6R9 512 aa22.48■■□□□ 1.19
RAB40C-210ENST00000566290 NWD2Q9ULI1 1742 aa22.48■■□□□ 1.19
RAB40C-210ENST00000566290 LMOD2Q6P5Q4 547 aa22.47■■□□□ 1.19
RAB40C-210ENST00000566290 SLC12A5Q9H2X9 1139 aa22.46■■□□□ 1.19
RAB40C-210ENST00000566290 ACEP12821 1306 aa22.46■■□□□ 1.19
RAB40C-210ENST00000566290 A0A1W2PP64 1363 aa22.46■■□□□ 1.19
RAB40C-210ENST00000566290 PLEKHG3A1L390 1219 aa22.45■■□□□ 1.18
RAB40C-210ENST00000566290 TERF2IPQ9NYB0 399 aa22.45■■□□□ 1.18
RAB40C-210ENST00000566290 ALS2Q96Q42 1657 aa22.45■■□□□ 1.18
RAB40C-210ENST00000566290 RGPD1P0DJD0 1748 aa22.45■■□□□ 1.18
RAB40C-210ENST00000566290 PPIP5K1Q6PFW1 1433 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms