RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 KCNH2Q12809 1159 aa11.83□□□□□ -0.52
CHD9-214ENST00000565119 CCDC102AQ96A19 550 aa11.83□□□□□ -0.52
CHD9-214ENST00000565119 CLCN1P35523 988 aa11.82□□□□□ -0.52
CHD9-214ENST00000565119 MAN1A2O60476 641 aa11.77□□□□□ -0.53
CHD9-214ENST00000565119 PPFIA3O75145 1194 aa11.77□□□□□ -0.53
CHD9-214ENST00000565119 NDUFV2P19404 249 aa11.77□□□□□ -0.53
CHD9-214ENST00000565119 PRR7Q8TB68 274 aa11.77□□□□□ -0.53
CHD9-214ENST00000565119 ZFAND3Q9H8U3 227 aa11.77□□□□□ -0.53
CHD9-214ENST00000565119 C6orf118Q5T5N4 469 aa11.76□□□□□ -0.53
CHD9-214ENST00000565119 SPIRE2Q8WWL2 714 aa11.75□□□□□ -0.53
CHD9-214ENST00000565119 ZIC2O95409 532 aaPredicted RBP11.74□□□□□ -0.53
CHD9-214ENST00000565119 FAM174AQ8TBP5 190 aa11.74□□□□□ -0.53
CHD9-214ENST00000565119 ITPKCQ96DU7 683 aa11.74□□□□□ -0.53
CHD9-214ENST00000565119 CDK15Q96Q40 435 aa11.74□□□□□ -0.53
CHD9-214ENST00000565119 MOXD2PA6NHM9 499 aa11.73□□□□□ -0.53
CHD9-214ENST00000565119 NR3C2P08235 984 aa11.72□□□□□ -0.53
CHD9-214ENST00000565119 DESI1Q6ICB0 168 aa11.72□□□□□ -0.53
CHD9-214ENST00000565119 TMEM151AQ8N4L1 468 aa11.72□□□□□ -0.53
CHD9-214ENST00000565119 KRT76Q01546 638 aa11.71□□□□□ -0.53
CHD9-214ENST00000565119 RASSF7Q02833 373 aa11.71□□□□□ -0.53
CHD9-214ENST00000565119 ARID5BQ14865 1188 aa11.71□□□□□ -0.53
CHD9-214ENST00000565119 KRI1Q8N9T8 703 aaKnown RBP11.71□□□□□ -0.53
CHD9-214ENST00000565119 FOXJ1Q92949 421 aa11.71□□□□□ -0.53
CHD9-214ENST00000565119 GDF11O95390 407 aa11.7□□□□□ -0.54
CHD9-214ENST00000565119 SSTR3P32745 418 aaPredicted RBP11.69□□□□□ -0.54
CHD9-214ENST00000565119 MTMR2Q13614 643 aa11.69□□□□□ -0.54
CHD9-214ENST00000565119 CTHP32929 405 aa11.68□□□□□ -0.54
CHD9-214ENST00000565119 GPR161Q8N6U8 529 aaKnown RBP11.68□□□□□ -0.54
CHD9-214ENST00000565119 SPDYE5A6NIY4 337 aa11.67□□□□□ -0.54
CHD9-214ENST00000565119 BMP2P12643 396 aa11.67□□□□□ -0.54
CHD9-214ENST00000565119 GRM5P41594 1212 aa11.67□□□□□ -0.54
CHD9-214ENST00000565119 LYPD8Q6UX82 237 aa11.67□□□□□ -0.54
CHD9-214ENST00000565119 DNMT3LQ9UJW3 386 aa11.67□□□□□ -0.54
CHD9-214ENST00000565119 NR5A1Q13285 461 aa11.66□□□□□ -0.54
CHD9-214ENST00000565119 LINC00528Q8N1L1 170 aa11.66□□□□□ -0.54
CHD9-214ENST00000565119 ADAMTS8Q9UP79 889 aa11.66□□□□□ -0.54
CHD9-214ENST00000565119 SOS2Q07890 1332 aaPredicted RBP11.65□□□□□ -0.54
CHD9-214ENST00000565119 C4orf48Q5BLP8 95 aa11.65□□□□□ -0.54
CHD9-214ENST00000565119 MEIOBQ8N635 442 aa11.65□□□□□ -0.54
CHD9-214ENST00000565119 CNTNAP3BQ96NU0 1288 aa11.65□□□□□ -0.54
CHD9-214ENST00000565119 CNTNAP3Q9BZ76 1288 aa11.65□□□□□ -0.54
CHD9-214ENST00000565119 MAP10Q9P2G4 905 aa11.64□□□□□ -0.55
CHD9-214ENST00000565119 UPP2O95045 317 aa11.62□□□□□ -0.55
CHD9-214ENST00000565119 PLCB2Q00722 1185 aa11.62□□□□□ -0.55
CHD9-214ENST00000565119 CFAP99D6REC4 459 aa11.61□□□□□ -0.55
CHD9-214ENST00000565119 F12P00748 615 aaPredicted RBP11.61□□□□□ -0.55
CHD9-214ENST00000565119 RNF225M0QZC1 329 aaPredicted RBP11.59□□□□□ -0.55
CHD9-214ENST00000565119 TULP1O00294 542 aaPredicted RBP11.59□□□□□ -0.55
CHD9-214ENST00000565119 SPTLC1O15269 473 aa11.59□□□□□ -0.55
CHD9-214ENST00000565119 AGERQ15109 404 aa11.58□□□□□ -0.56
CHD9-214ENST00000565119 ZNF385CQ66K41 422 aaPredicted RBP11.58□□□□□ -0.56
CHD9-214ENST00000565119 COL25A1Q9BXS0 654 aaPredicted RBP11.58□□□□□ -0.56
CHD9-214ENST00000565119 PCDHB15Q9Y5E8 787 aa11.58□□□□□ -0.56
CHD9-214ENST00000565119 PTSQ03393 145 aa11.56□□□□□ -0.56
CHD9-214ENST00000565119 RNFT1Q5M7Z0 435 aa11.56□□□□□ -0.56
CHD9-214ENST00000565119 BPHLQ86WA6 291 aaPredicted RBP11.56□□□□□ -0.56
CHD9-214ENST00000565119 KDM2AQ9Y2K7 1162 aa11.56□□□□□ -0.56
CHD9-214ENST00000565119 GJA5P36382 358 aa11.55□□□□□ -0.56
CHD9-214ENST00000565119 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.55□□□□□ -0.569e-6■■■■□ 24.9
CHD9-214ENST00000565119 RSBN1LQ6PCB5 846 aaPredicted RBP11.55□□□□□ -0.56
CHD9-214ENST00000565119 WHAMMQ8TF30 809 aa11.54□□□□□ -0.56
CHD9-214ENST00000565119 TSEN34Q9BSV6 310 aaKnown RBP11.54□□□□□ -0.56
CHD9-214ENST00000565119 TTLL8A6PVC2 850 aa11.53□□□□□ -0.56
CHD9-214ENST00000565119 FSHRP23945 695 aa11.53□□□□□ -0.56
CHD9-214ENST00000565119 TTLL12Q14166 644 aaPredicted RBP11.53□□□□□ -0.56
CHD9-214ENST00000565119 GPAT2Q6NUI2 795 aa11.53□□□□□ -0.56
CHD9-214ENST00000565119 NANOS1Q8WY41 292 aaKnown RBP11.53□□□□□ -0.56
CHD9-214ENST00000565119 BEGAINQ9BUH8 593 aa11.53□□□□□ -0.56
CHD9-214ENST00000565119 C1QTNF2Q9BXJ5 285 aa11.53□□□□□ -0.56
CHD9-214ENST00000565119 TBC1D2Q9BYX2 928 aa11.53□□□□□ -0.56
CHD9-214ENST00000565119 PER1O15534 1290 aaPredicted RBP11.52□□□□□ -0.57
CHD9-214ENST00000565119 HRCP23327 699 aa11.52□□□□□ -0.57
CHD9-214ENST00000565119 SVOPQ8N4V2 548 aa11.52□□□□□ -0.57
CHD9-214ENST00000565119 FIGNL2A6NMB9 653 aa11.51□□□□□ -0.57
CHD9-214ENST00000565119 IRS1P35568 1242 aa11.51□□□□□ -0.57
CHD9-214ENST00000565119 GIGYF2Q6Y7W6 1299 aaKnown RBP11.51□□□□□ -0.57
CHD9-214ENST00000565119 ARHGEF15O94989 841 aa11.5□□□□□ -0.57
CHD9-214ENST00000565119 CCDC155Q8N6L0 562 aa11.5□□□□□ -0.57
CHD9-214ENST00000565119 DNMT3AQ9Y6K1 912 aaPredicted RBP11.5□□□□□ -0.57
CHD9-214ENST00000565119 SH3RF1Q7Z6J0 888 aa11.49□□□□□ -0.57
CHD9-214ENST00000565119 ZBTB3Q9H5J0 574 aa11.49□□□□□ -0.57
CHD9-214ENST00000565119 MAP4K5Q9Y4K4 846 aa11.49□□□□□ -0.57
CHD9-214ENST00000565119 SLURP2P0DP57 97 aa11.48□□□□□ -0.57
CHD9-214ENST00000565119 AMHR2Q16671 573 aa11.48□□□□□ -0.57
CHD9-214ENST00000565119 VASH1Q7L8A9 365 aaPredicted RBP11.48□□□□□ -0.57
CHD9-214ENST00000565119 CABLES1Q8TDN4 633 aa11.48□□□□□ -0.57
CHD9-214ENST00000565119 EMILIN1Q9Y6C2 1016 aa11.48□□□□□ -0.57
CHD9-214ENST00000565119 TRMT44Q8IYL2 757 aaKnown RBP11.46□□□□□ -0.57
CHD9-214ENST00000565119 CCDC116Q8IYX3 515 aa11.46□□□□□ -0.57
CHD9-214ENST00000565119 SLC35F4A4IF30 521 aa11.45□□□□□ -0.58
CHD9-214ENST00000565119 IGHA1P01876 353 aa11.45□□□□□ -0.58
CHD9-214ENST00000565119 CBLBQ13191 982 aa11.44□□□□□ -0.58
CHD9-214ENST00000565119 PRPF38BQ5VTL8 546 aaKnown RBP11.44□□□□□ -0.58
CHD9-214ENST00000565119 SH3BP5LQ7L8J4 393 aa11.44□□□□□ -0.58
CHD9-214ENST00000565119 VWA5B2Q8N398 1253 aa11.44□□□□□ -0.58
CHD9-214ENST00000565119 SPINT1O43278 529 aa11.43□□□□□ -0.58
CHD9-214ENST00000565119 DIXDC1Q155Q3 683 aa11.43□□□□□ -0.58
CHD9-214ENST00000565119 ITGA6P23229 1130 aa11.42□□□□□ -0.58
CHD9-214ENST00000565119 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
CHD9-214ENST00000565119 Q6ZVU0 165 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms