RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 BRINP3Q76B58 766 aa17.09■□□□□ 0.33
NSMCE1-208ENST00000565070 NPHP3Q7Z494 1330 aa17.08■□□□□ 0.33
NSMCE1-208ENST00000565070 CNGB1Q14028 1251 aaPredicted RBP17.08■□□□□ 0.33
NSMCE1-208ENST00000565070 AMER1Q5JTC6 1135 aaPredicted RBP17.08■□□□□ 0.33
NSMCE1-208ENST00000565070 NSD3Q9BZ95 1437 aa17.08■□□□□ 0.32
NSMCE1-208ENST00000565070 ROBO1Q9Y6N7 1651 aa17.08■□□□□ 0.32
NSMCE1-208ENST00000565070 UBAP1LF5GYI3 381 aa17.07■□□□□ 0.32
NSMCE1-208ENST00000565070 PNISRQ8TF01 805 aaKnown RBP17.07■□□□□ 0.32
NSMCE1-208ENST00000565070 ZBED9Q6R2W3 1325 aa17.07■□□□□ 0.32
NSMCE1-208ENST00000565070 NRKQ7Z2Y5 1582 aa17.07■□□□□ 0.32
NSMCE1-208ENST00000565070 PSME1Q06323 249 aa17.07■□□□□ 0.32
NSMCE1-208ENST00000565070 CGNL1Q0VF96 1302 aa17.07■□□□□ 0.32
NSMCE1-208ENST00000565070 FOXO3O43524 673 aa17.06■□□□□ 0.32
NSMCE1-208ENST00000565070 NHSL1Q5SYE7 1610 aa17.06■□□□□ 0.32
NSMCE1-208ENST00000565070 NLRP13Q86W25 1043 aa17.05■□□□□ 0.32
NSMCE1-208ENST00000565070 TTC21AQ8NDW8 1320 aa17.05■□□□□ 0.32
NSMCE1-208ENST00000565070 NSD2O96028 1365 aa17.04■□□□□ 0.32
NSMCE1-208ENST00000565070 NPC1L1Q9UHC9 1359 aa17.04■□□□□ 0.32
NSMCE1-208ENST00000565070 SUPT16HQ9Y5B9 1047 aaKnown RBP17.04■□□□□ 0.32
NSMCE1-208ENST00000565070 KIF20BQ96Q89 1820 aa17.04■□□□□ 0.32
NSMCE1-208ENST00000565070 SSH2Q76I76 1423 aa17.04■□□□□ 0.32
NSMCE1-208ENST00000565070 KRT28Q7Z3Y7 464 aa17.03■□□□□ 0.32
NSMCE1-208ENST00000565070 AHDC1Q5TGY3 1603 aaPredicted RBP17.03■□□□□ 0.32
NSMCE1-208ENST00000565070 TRPM3Q9HCF6 1732 aaPredicted RBP17.02■□□□□ 0.32
NSMCE1-208ENST00000565070 CC2D1BQ5T0F9 858 aaKnown RBP17.02■□□□□ 0.32
NSMCE1-208ENST00000565070 TTC21BQ7Z4L5 1316 aa17.02■□□□□ 0.32
NSMCE1-208ENST00000565070 SBNO1A3KN83 1393 aa17.02■□□□□ 0.31
NSMCE1-208ENST00000565070 PXDNQ92626 1479 aa17.02■□□□□ 0.31
NSMCE1-208ENST00000565070 ANKRD26Q9UPS8 1709 aa17.01■□□□□ 0.31
NSMCE1-208ENST00000565070 PIP4K2BP78356 416 aa17■□□□□ 0.31
NSMCE1-208ENST00000565070 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17■□□□□ 0.31
NSMCE1-208ENST00000565070 PAK3O75914 559 aaPredicted RBP16.99■□□□□ 0.31
NSMCE1-208ENST00000565070 SOS2Q07890 1332 aaPredicted RBP16.99■□□□□ 0.31
NSMCE1-208ENST00000565070 PHLPP1O60346 1717 aa16.98■□□□□ 0.31
NSMCE1-208ENST00000565070 ALS2Q96Q42 1657 aa16.98■□□□□ 0.31
NSMCE1-208ENST00000565070 TNS3Q68CZ2 1445 aa16.97■□□□□ 0.31
NSMCE1-208ENST00000565070 FYB1O15117 783 aa16.97■□□□□ 0.31
NSMCE1-208ENST00000565070 XPCQ01831 940 aaPredicted RBP16.97■□□□□ 0.31
NSMCE1-208ENST00000565070 PIK3C2AO00443 1686 aa16.97■□□□□ 0.31
NSMCE1-208ENST00000565070 USP54Q70EL1 1684 aa16.97■□□□□ 0.31
NSMCE1-208ENST00000565070 ARHGEF10O15013 1369 aa16.97■□□□□ 0.31
NSMCE1-208ENST00000565070 INSRP06213 1382 aa16.97■□□□□ 0.31
NSMCE1-208ENST00000565070 DDX17Q92841 729 aaKnown RBP16.97■□□□□ 0.31
NSMCE1-208ENST00000565070 USP31Q70CQ4 1352 aa16.96■□□□□ 0.31
NSMCE1-208ENST00000565070 ABTB2Q8N961 1025 aa16.96■□□□□ 0.31
NSMCE1-208ENST00000565070 NME9Q86XW9 330 aa16.95■□□□□ 0.3
NSMCE1-208ENST00000565070 COG3Q96JB2 828 aa16.95■□□□□ 0.3
NSMCE1-208ENST00000565070 SPATA31A3Q5VYP0 1347 aa16.95■□□□□ 0.3
NSMCE1-208ENST00000565070 LRRC59Q96AG4 307 aaKnown RBP16.94■□□□□ 0.3
NSMCE1-208ENST00000565070 GGNBP2Q9H3C7 697 aa16.94■□□□□ 0.3
NSMCE1-208ENST00000565070 OVOS2A0A0J9YW53 1432 aa16.93■□□□□ 0.3
NSMCE1-208ENST00000565070 OVOS2Q6IE36 1432 aa16.93■□□□□ 0.3
NSMCE1-208ENST00000565070 NLRP6P59044 892 aa16.93■□□□□ 0.3
NSMCE1-208ENST00000565070 MORC1Q86VD1 984 aa16.93■□□□□ 0.3
NSMCE1-208ENST00000565070 COL16A1Q07092 1604 aaPredicted RBP16.93■□□□□ 0.3
NSMCE1-208ENST00000565070 LMOD2Q6P5Q4 547 aa16.93■□□□□ 0.3
NSMCE1-208ENST00000565070 NEFLP07196 543 aa16.92■□□□□ 0.3
NSMCE1-208ENST00000565070 PPP2R1AP30153 589 aa16.91■□□□□ 0.3
NSMCE1-208ENST00000565070 FKBP8Q14318 412 aa16.91■□□□□ 0.3
NSMCE1-208ENST00000565070 MED1Q15648 1581 aaPredicted RBP16.91■□□□□ 0.3
NSMCE1-208ENST00000565070 MARF1Q9Y4F3 1742 aaKnown RBP16.91■□□□□ 0.3
NSMCE1-208ENST00000565070 SMG6Q86US8 1419 aaKnown RBP16.9■□□□□ 0.3
NSMCE1-208ENST00000565070 BLMP54132 1417 aaPredicted RBP16.89■□□□□ 0.29
NSMCE1-208ENST00000565070 PELP1Q8IZL8 1130 aaKnown RBP16.88■□□□□ 0.29
NSMCE1-208ENST00000565070 USP19O94966 1318 aa16.88■□□□□ 0.29
NSMCE1-208ENST00000565070 SLIT3O75094 1523 aa16.88■□□□□ 0.29
NSMCE1-208ENST00000565070 NUTM2GQ5VZR2 741 aa16.88■□□□□ 0.29
NSMCE1-208ENST00000565070 KCNH5Q8NCM2 988 aa16.88■□□□□ 0.29
NSMCE1-208ENST00000565070 ZRANB1Q9UGI0 708 aa16.88■□□□□ 0.29
NSMCE1-208ENST00000565070 COL22A1Q8NFW1 1626 aaPredicted RBP16.88■□□□□ 0.29
NSMCE1-208ENST00000565070 AATKQ6ZMQ8 1374 aa16.87■□□□□ 0.29
NSMCE1-208ENST00000565070 CRYBG1Q9Y4K1 1723 aa16.86■□□□□ 0.29
NSMCE1-208ENST00000565070 PHRF1Q9P1Y6 1649 aaKnown RBP16.86■□□□□ 0.29
NSMCE1-208ENST00000565070 SHPRHQ149N8 1683 aa16.85■□□□□ 0.29
NSMCE1-208ENST00000565070 PNPLA6Q8IY17 1366 aa16.85■□□□□ 0.29
NSMCE1-208ENST00000565070 MAP2P11137 1827 aaKnown RBP16.85■□□□□ 0.29
NSMCE1-208ENST00000565070 ABCA3Q99758 1704 aa16.84■□□□□ 0.29
NSMCE1-208ENST00000565070 TNNT2P45379 298 aaPredicted RBP16.84■□□□□ 0.29
NSMCE1-208ENST00000565070 NUDCQ9Y266 331 aa16.84■□□□□ 0.29
NSMCE1-208ENST00000565070 JCADQ9P266 1359 aa16.84■□□□□ 0.29
NSMCE1-208ENST00000565070 GCP02774 474 aa16.83■□□□□ 0.28
NSMCE1-208ENST00000565070 FBXO41Q8TF61 875 aa16.83■□□□□ 0.28
NSMCE1-208ENST00000565070 NFAT5O94916 1531 aa16.83■□□□□ 0.28
NSMCE1-208ENST00000565070 HAP1P54257 671 aaPredicted RBP16.82■□□□□ 0.28
NSMCE1-208ENST00000565070 KIF24Q5T7B8 1368 aa16.81■□□□□ 0.28
NSMCE1-208ENST00000565070 HSPA1LP34931 641 aa16.81■□□□□ 0.28
NSMCE1-208ENST00000565070 LTN1O94822 1766 aa16.81■□□□□ 0.28
NSMCE1-208ENST00000565070 SOX12O15370 315 aa16.8■□□□□ 0.28
NSMCE1-208ENST00000565070 PDE3BQ13370 1112 aa16.79■□□□□ 0.28
NSMCE1-208ENST00000565070 ERICH6BQ5W0A0 696 aa16.79■□□□□ 0.28
NSMCE1-208ENST00000565070 ADAMTS8Q9UP79 889 aa16.79■□□□□ 0.28
NSMCE1-208ENST00000565070 RTL1A6NKG5 1358 aa16.79■□□□□ 0.28
NSMCE1-208ENST00000565070 CPDO75976 1380 aa16.79■□□□□ 0.28
NSMCE1-208ENST00000565070 ABCC6O95255 1503 aa16.78■□□□□ 0.28
NSMCE1-208ENST00000565070 CABLES1Q8TDN4 633 aa16.78■□□□□ 0.28
NSMCE1-208ENST00000565070 CFAP53Q96M91 514 aa16.78■□□□□ 0.28
NSMCE1-208ENST00000565070 POLKQ9UBT6 870 aa16.78■□□□□ 0.28
NSMCE1-208ENST00000565070 CDK12Q9NYV4 1490 aaPredicted RBP16.78■□□□□ 0.28
NSMCE1-208ENST00000565070 SPATA31A6Q5VVP1 1343 aa16.78■□□□□ 0.28
NSMCE1-208ENST00000565070 PLEKHG5O94827 1062 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms